HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:175.6 nTPM
HPA Brain:543.6 nTPM
GTEx:175.6 nTPM
FANTOM5:405.6 Scaled Tags Per Million
Pig:387.6 nTPM
Mouse:324.2 nTPM
Allen mouse:18.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA069318
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 543.6
Sample id Sample description nTPM
Hippocampus
nTPM: 384.4
2148 Female, age 91, left hemisphere 501.9
2621 Female, age 67, right hemisphere 479.0
1898 Male, age 80, left hemisphere 410.6
1911 Female, age 85, right hemisphere 339.6
2529 Female, age 94, left hemisphere 288.2
1855 Male, age 76, left hemisphere 287.3
Dentate gyrus
nTPM: 435.5
2531 Female, age 67, both hemispheres 639.4
1927 Female, age 91, both hemispheres 564.2
2528 Male, age 74, both hemispheres 403.5
2530 Female, age 94, left hemisphere 372.2
2246 Female, age 85, both hemispheres 360.9
2010 Male, age 76, both hemispheres 272.7
Entorhinal gyrus
nTPM: 327.0
2613 Female, age 94, left hemisphere 447.4
2764 Male, age 80, right hemisphere 393.1
1938 Female, age 85, left hemisphere 346.3
2686 Male, age 75, right hemisphere 279.0
1787 Male, age 76, left hemisphere 276.0
2117 Female, age 91, right hemisphere 220.2
Hippocampus, CA1
nTPM: 461.6
2749 Male, age 80, left hemisphere 793.1
2082 Female, age 91, right hemisphere 429.3
1873 Female, age 85, both hemispheres 379.8
2527 Male, age 74, both hemispheres 355.7
2045 Male, age 76, both hemispheres 349.9
Hippocampus, CA2
nTPM: 349.0
2113 Female, age 91, right hemisphere 402.1
1963 Male, age 80, left hemisphere 389.2
1892 Male, age 76, both hemispheres 351.9
2437 Female, age 94, left hemisphere 327.5
2249 Male, age 74, both hemispheres 314.5
1940 Female, age 85, left hemisphere 308.9
Hippocampus, CA3
nTPM: 543.6
2620 Female, age 94, left hemisphere 1024.0
2137 Male, age 80, left hemisphere 753.8
2861 Female, age 67, both hemispheres 617.0
2436 Male, age 74, both hemispheres 319.0
1867 Male, age 76, both hemispheres 298.5
1891 Female, age 85, both hemispheres 249.4
Parahippocampal cortex
nTPM: 347.9
2245 Female, age 91, both hemispheres 529.1
2693 Female, age 94, both hemispheres 391.1
2622 Female, age 67, right hemisphere 386.2
1850 Male, age 80, both hemispheres 370.1
2250 Female, age 67, right hemisphere 348.1
1990 Female, age 91, right hemisphere 338.1
1933 Female, age 85, both hemispheres 325.3
2532 Female, age 72, left hemisphere 314.9
2692 Male, age 74, both hemispheres 245.4
2018 Male, age 76, both hemispheres 230.4
Perirhinal gyrus
nTPM: 410.5
1847 Female, age 91, left hemisphere 506.3
1794 Male, age 80, right hemisphere 462.2
2521 Female, age 94, right hemisphere 430.8
1841 Female, age 85, right hemisphere 385.9
2848 Male, age 76, right hemisphere 267.3
Subiculum
nTPM: 274.5
1901 Male, age 80, both hemispheres 354.7
2729 Female, age 91, right hemisphere 332.9
1977 Female, age 85, both hemispheres 297.6
2619 Male, age 74, both hemispheres 240.9
2042 Male, age 76, both hemispheres 211.7
2438 Female, age 94, left hemisphere 208.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 175.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 175.6
Samples: 197

Max nTPM: 505.0
Min nTPM: 4.8
Std nTPM: 112.5
Median nTPM: 167.4
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 505.0
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 474.7
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 459.2
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 454.6
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 433.9
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 433.7
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 406.8
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 405.5
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 399.3
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 398.1
GTEX-T5JC-0011-R1A-SM-32PM6 20-29 years, male 386.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 405.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 405.6
FF:10169-103B7 60 years, female 602.3
FF:10153-102I9 76 years, female 209.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 387.6
Pig sample Sample description nTPM
Subiculum
nTPM: 151.6
Samples: 4

Max nTPM: 211.8
Min nTPM: 124.0
Sample A Female 211.8
Sample B Female 129.7
Sample C Male 140.8
Sample D Male 124.0
Dorsal hippocampus
nTPM: 387.6
Samples: 4

Max nTPM: 524.9
Min nTPM: 160.9
Sample A Female 524.9
Sample B Female 506.1
Sample C Male 160.9
Sample D Male 358.3
Entorhinal cortex
nTPM: 259.7
Samples: 4

Max nTPM: 334.1
Min nTPM: 225.2
Sample A Female 334.1
Sample B Female 230.0
Sample C Male 249.5
Sample D Male 225.2
Ventral hippocampus
nTPM: 294.5
Samples: 4

Max nTPM: 557.2
Min nTPM: 165.9
Sample A Female 234.7
Sample B Female 165.9
Sample C Male 220.0
Sample D Male 557.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 324.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 293.5
Samples: 4

Max nTPM: 333.5
Min nTPM: 278.4
Sample A Male 278.4
Sample B Male 279.9
Sample C Female 282.1
Sample D Female 333.5
Hippocampal formation
nTPM: 324.2
Samples: 4

Max nTPM: 362.5
Min nTPM: 287.0
Sample A Male 287.0
Sample B Male 349.0
Sample C Female 362.5
Sample D Female 298.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 18.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 18.9
544328 Antisense, RP_040625_01_H06, Mouse strain C57BL/6J (56 days, male) 19.3
71608455 Antisense, RP_050927_01_G05, Mouse strain C57BL/6J (56 days, male) 18.5

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