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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
GTEx:244.9 nTPM
FANTOM5:670.6 Scaled Tags Per Million
Pig:395.5 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA069318
Glial cells Low
Neuronal cells Medium



CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

244.9
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 244.9
Samples: 246

Max nTPM: 541.4
Min nTPM: 18.7
Std nTPM: 133.8
Median nTPM: 244.0
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 541.4
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 532.9
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 526.5
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 517.8
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 514.1
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 497.9
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 489.6
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 489.2
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 487.6
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 484.2
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 483.8
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 469.9
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 459.0
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 457.5
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 451.7
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 451.1
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 448.9
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 446.4
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 432.3
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 429.9
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 429.1
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 426.7
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 423.1
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 422.7
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 422.6
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 422.6
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 417.2
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 415.7
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 412.1
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 405.8
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 405.6
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 405.4
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 402.8
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 400.6
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 399.8
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 397.7
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 396.2
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 395.8
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 395.4
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 395.2
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 394.2
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 392.6
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 391.6
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 386.9
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 384.9
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 383.6
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 380.5
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 379.0
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 375.8
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 374.4
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 374.2
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 373.0
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 372.7
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 371.7
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 369.4
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 369.2
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 368.3
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 367.4
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 366.6
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 363.6
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 359.7
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 357.6
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 355.0
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 354.4
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 351.9
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 351.5
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 350.9
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 349.9
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 345.7
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 340.7
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 340.6
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 339.2
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 336.9
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 333.0
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 330.9
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 328.9
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 327.2
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 326.9
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 325.0
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 324.0
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 322.6
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 317.2
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 316.9
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 315.1
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 311.0
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 310.2
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 307.3
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 307.0
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 306.5
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 301.5
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 300.6
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 298.8
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 298.5
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 295.5
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 293.0
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 292.7
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 283.7
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 281.6
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 280.2
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 278.8
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 278.4
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 278.1
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 276.3
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 274.9
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 272.6
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 267.3
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 267.0
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 265.2
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 264.5
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 264.1
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 263.9
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 263.0
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 262.7
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 262.0
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 261.6
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 260.8
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 260.2
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 256.6
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 254.5
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 253.9
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 251.8
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 251.5
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 246.3
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 241.8
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 241.4
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 239.8
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 237.4
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 235.9
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 234.1
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 233.3
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 230.7
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 228.9
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 226.1
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 225.2
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 225.1
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 222.2
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 222.2
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 220.3
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 213.4
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 209.6
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 207.7
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 206.8
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 205.8
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 203.9
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 200.8
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 200.7
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 200.1
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 194.9
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 193.6
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 191.4
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 190.6
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 189.8
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 189.6
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 188.6
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 183.1
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 183.0
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 178.6
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 178.2
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 174.3
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 173.6
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 172.9
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 171.5
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 170.5
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 169.8
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 164.8
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 160.4
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 157.6
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 155.5
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 155.1
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 152.4
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 152.2
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 150.5
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 150.1
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 148.3
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 143.1
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 141.6
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 140.9
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 139.5
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 138.1
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 136.3
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 132.9
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 131.0
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 129.6
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 127.1
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 125.3
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 121.6
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 118.5
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 118.3
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 115.7
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 113.0
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 110.3
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 108.3
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 107.9
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 107.4
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 107.1
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 106.9
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 105.9
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 104.0
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 101.3
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 101.0
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 100.3
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 97.2
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 96.6
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 95.8
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 95.5
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 90.7
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 89.9
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 85.8
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 85.3
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 80.6
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 79.8
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 79.0
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 77.6
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 77.4
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 77.3
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 77.0
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 73.4
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 72.5
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 71.6
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 71.5
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 69.0
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 68.7
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 67.5
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 65.1
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 65.0
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 64.4
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 60.0
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 59.6
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 56.7
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 55.3
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 54.3
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 52.9
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 52.0
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 51.5
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 50.0
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 46.2
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 46.0
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 39.1
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 37.5
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 37.1
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 26.9
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 26.8
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 25.2
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 25.2
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 25.1
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 18.7
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

670.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 670.6
FF:10164-103B2 76 years, female 670.6

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

395.5
Pig sample Sample description nTPM
Caudate
nTPM: 395.5
Samples: 4

Max nTPM: 515.7
Min nTPM: 293.7
Sample A Female 293.7
Sample B Female 384.5
Sample C Male 515.7
Sample D Male 388.0

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