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TISSUE PRIMARY DATA VAGINA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Vagina
Tissue proteome
Vagina
VAGINA - Expression summary
Protein expression
Vaginai

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Squamous epithelial cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:199.6 nTPM
GTEx:199.6 nTPM
FANTOM5:1318.0 Scaled Tags Per Million

VAGINA - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody CAB037113
Squamous epithelial cells Medium


VAGINA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

199.6
GTEx sample id Sample description nTPM
Vagina
Average nTPM: 199.6
Samples: 156

Max nTPM: 676.3
Min nTPM: 97.8
Std nTPM: 60.9
Median nTPM: 192.2
GTEX-14AS3-1726-SM-5RQJV 40-49 years, female 676.3
GTEX-Q734-1426-SM-DTXFX 40-49 years, female 404.4
GTEX-14BMU-1926-SM-5S2QC 20-29 years, female 336.7
GTEX-14PKU-1326-SM-6871B 40-49 years, female 319.1
GTEX-14JG6-0726-SM-69LQH 30-39 years, female 306.4
GTEX-ZLWG-1126-SM-4WWFQ 50-59 years, female 305.4
GTEX-1F5PL-1826-SM-7P8PP 40-49 years, female 303.9
GTEX-ZZPU-2226-SM-5EGIV 50-59 years, female 288.5
GTEX-14PN3-1626-SM-6AJAV 60-69 years, female 278.3
GTEX-S7SF-1426-SM-4AT5A 20-29 years, female 272.7
GTEX-QVJO-2526-SM-CYPRA 60-69 years, female 270.7
GTEX-11I78-2026-SM-5987C 50-59 years, female 266.8
GTEX-X8HC-2826-SM-46MWJ 50-59 years, female 266.3
GTEX-ZTPG-2226-SM-57WF9 20-29 years, female 264.3
GTEX-11VI4-0726-SM-5GU5B 40-49 years, female 258.6
GTEX-13D11-1326-SM-5IJFY 50-59 years, female 256.9
GTEX-13PL7-2726-SM-5L3GB 60-69 years, female 255.4
GTEX-1CAMS-2326-SM-793CR 40-49 years, female 254.1
GTEX-11XUK-1326-SM-5EQM4 40-49 years, female 253.8
GTEX-14PJ6-1626-SM-6872D 60-69 years, female 253.2
GTEX-15SDE-1726-SM-6LPJS 50-59 years, female 253.0
GTEX-1MCYP-1326-SM-EV7AD 20-29 years, female 252.8
GTEX-1399S-2326-SM-5K7YV 30-39 years, female 247.3
GTEX-1HCU8-2026-SM-9YFLE 60-69 years, female 246.0
GTEX-131XG-2126-SM-5DUXG 50-59 years, female 245.9
GTEX-1JN76-1526-SM-CNPPF 20-29 years, female 244.5
GTEX-16NGA-1626-SM-72D6M 40-49 years, female 242.4
GTEX-SE5C-1126-SM-4BRWZ 40-49 years, female 241.3
GTEX-PWCY-1726-SM-48TD3 20-29 years, female 240.5
GTEX-17F9Y-2326-SM-7DUFP 70-79 years, female 238.4
GTEX-ZQG8-1126-SM-51MRL 60-69 years, female 236.3
GTEX-13OVI-0926-SM-5J1MI 60-69 years, female 230.5
GTEX-U3ZN-0926-SM-4DXTU 30-39 years, female 230.5
GTEX-ZGAY-2226-SM-4YCCX 40-49 years, female 228.6
GTEX-TML8-1126-SM-4DXSS 40-49 years, female 227.3
GTEX-15ER7-2526-SM-7KUFW 20-29 years, female 224.5
GTEX-1LNCM-1026-SM-E9U5D 50-59 years, female 224.4
GTEX-1GN1W-1526-SM-7P8TG 50-59 years, female 223.7
GTEX-11EM3-1826-SM-5A5KO 20-29 years, female 222.8
GTEX-1IDJU-1026-SM-AHZ2U 60-69 years, female 222.4
GTEX-11EMC-1926-SM-5A5JU 60-69 years, female 221.3
GTEX-1AMFI-1526-SM-73KVY 50-59 years, female 220.9
GTEX-ZP4G-0826-SM-4WWF3 20-29 years, female 218.8
GTEX-1LVAM-1926-SM-E6CIM 50-59 years, female 217.3
GTEX-12WSD-2926-SM-5LZUH 60-69 years, female 216.2
GTEX-Y3IK-2226-SM-4YCD4 50-59 years, female 215.7
GTEX-S341-1226-SM-4AD5S 40-49 years, female 214.7
GTEX-18D9A-1026-SM-7KFRU 30-39 years, female 214.4
GTEX-14H4A-2426-SM-664OQ 40-49 years, female 214.2
GTEX-Y114-1926-SM-4TT8J 50-59 years, female 214.1
GTEX-T6MO-1226-SM-4DM5S 40-49 years, female 213.5
GTEX-1LVAN-1626-SM-CNPQ7 50-59 years, female 210.2
GTEX-16NPV-2526-SM-6M483 50-59 years, female 208.6
GTEX-WEY5-0826-SM-4LMIH 40-49 years, female 208.6
GTEX-11DXX-1726-SM-5H11T 60-69 years, female 205.9
GTEX-ZC5H-2226-SM-4WAWS 40-49 years, female 205.6
GTEX-ZVT2-0626-SM-5GICR 50-59 years, female 205.1
GTEX-1LGOU-1126-SM-D3LAI 20-29 years, female 204.5
GTEX-N7MT-1926-SM-3LK5N 60-69 years, female 202.6
GTEX-1S5ZU-2626-SM-E9TII 20-29 years, female 201.2
GTEX-1HCUA-1026-SM-A9SMI 50-59 years, female 200.1
GTEX-12WSJ-1326-SM-5GCOB 40-49 years, female 200.0
GTEX-ZXES-0626-SM-5E45P 30-39 years, female 199.7
GTEX-1I4MK-1726-SM-ARL7O 50-59 years, female 199.4
GTEX-1IE54-2626-SM-CMKFY 40-49 years, female 199.4
GTEX-RU1J-1426-SM-46MUV 20-29 years, female 199.2
GTEX-1QP28-1426-SM-EVR4E 50-59 years, female 198.4
GTEX-XUZC-1226-SM-4BRVJ 30-39 years, female 198.2
GTEX-146FH-2626-SM-5Q5E1 50-59 years, female 197.7
GTEX-13PVR-1426-SM-5S2PW 60-69 years, female 197.3
GTEX-11GSP-2226-SM-5HL5Q 60-69 years, female 196.1
GTEX-13QBU-1726-SM-5IJFQ 40-49 years, female 195.7
GTEX-OHPL-2526-SM-3MJGT 60-69 years, female 195.3
GTEX-UJHI-1326-SM-4IHJO 50-59 years, female 195.2
GTEX-145ME-1426-SM-5RQJS 40-49 years, female 195.0
GTEX-ZV6S-1326-SM-59HJA 40-49 years, female 193.4
GTEX-15SB6-1426-SM-7KUEM 50-59 years, female 193.3
GTEX-ZYVF-0326-SM-5GIES 50-59 years, female 192.9
GTEX-1117F-2526-SM-5GZY6 60-69 years, female 191.5
GTEX-TMMY-1926-SM-4DXUU 40-49 years, female 191.0
GTEX-S4UY-1326-SM-4AD4X 40-49 years, female 190.8
GTEX-1GMR8-2526-SM-7RHI9 50-59 years, female 190.3
GTEX-1JMQL-2326-SM-CNNPV 50-59 years, female 190.3
GTEX-13W3W-2326-SM-5LU4Y 60-69 years, female 190.1
GTEX-OHPK-2526-SM-3MJH9 50-59 years, female 189.9
GTEX-1C475-0526-SM-793AC 40-49 years, female 188.5
GTEX-QCQG-1226-SM-48U23 50-59 years, female 188.0
GTEX-1LGRB-2126-SM-COH48 50-59 years, female 187.5
GTEX-PX3G-2526-SM-48TZV 20-29 years, female 187.4
GTEX-1399U-1526-SM-5J2N7 50-59 years, female 187.3
GTEX-18A7A-2826-SM-7LT8J 50-59 years, female 186.9
GTEX-X15G-1926-SM-4PQZQ 50-59 years, female 186.8
GTEX-WYVS-1426-SM-4ONCV 40-49 years, female 186.2
GTEX-14A5I-2726-SM-5SIB3 50-59 years, female 185.4
GTEX-P78B-2226-SM-3P5ZZ 40-49 years, female 185.1
GTEX-1NUQO-1826-SM-E6CQU 20-29 years, female 183.0
GTEX-S4P3-1126-SM-4AD52 50-59 years, female 181.7
GTEX-PWN1-2526-SM-48TDS 40-49 years, female 181.6
GTEX-TSE9-2526-SM-4DXUS 60-69 years, female 181.4
GTEX-1GF9U-1926-SM-7P8TZ 40-49 years, female 181.0
GTEX-1R9JW-1426-SM-DTX9K 30-39 years, female 179.3
GTEX-13U4I-2026-SM-5LU3L 40-49 years, female 179.0
GTEX-W5WG-1026-SM-4LMIF 50-59 years, female 177.9
GTEX-1HBPM-2726-SM-9WYUA 60-69 years, female 176.7
GTEX-1MCC2-1126-SM-EVYD6 30-39 years, female 176.0
GTEX-ZYY3-2626-SM-5N9DH 60-69 years, female 174.0
GTEX-YJ8O-1226-SM-5P9JE 40-49 years, female 171.4
GTEX-1PIEJ-1926-SM-EVYB7 20-29 years, female 171.0
GTEX-XV7Q-1626-SM-4BRWC 40-49 years, female 170.3
GTEX-146FR-2426-SM-5NQAU 60-69 years, female 169.9
GTEX-ZE7O-2426-SM-57WD7 50-59 years, female 169.6
GTEX-1I1GT-1226-SM-B2LVK 60-69 years, female 166.4
GTEX-147F3-1526-SM-5SIAK 50-59 years, female 165.7
GTEX-1QPFJ-1626-SM-DTX7X 30-39 years, female 161.6
GTEX-1QCLZ-2226-SM-DTX7R 60-69 years, female 160.6
GTEX-RWS6-1726-SM-47JXP 60-69 years, female 160.4
GTEX-14PJM-2926-SM-69LOE 50-59 years, female 158.2
GTEX-11P81-2126-SM-5HL6N 30-39 years, female 156.5
GTEX-1HCU6-2326-SM-ACKXP 60-69 years, female 156.5
GTEX-113JC-1926-SM-5N9GE 50-59 years, female 156.3
GTEX-Y8LW-1426-SM-5RQJJ 50-59 years, female 155.9
GTEX-183WM-2126-SM-7LG4I 70-79 years, female 155.8
GTEX-15SHU-2926-SM-7KUKT 40-49 years, female 155.7
GTEX-13N11-1526-SM-5L3FL 50-59 years, female 154.2
GTEX-1A8FM-2426-SM-7IGPE 50-59 years, female 154.0
GTEX-1J1OQ-1826-SM-CL53R 40-49 years, female 153.5
GTEX-12ZZX-1926-SM-5EGKC 40-49 years, female 152.9
GTEX-YFC4-2926-SM-5IFJ8 40-49 years, female 151.7
GTEX-ZAK1-2426-SM-EXOHM 50-59 years, female 151.7
GTEX-XUW1-0326-SM-4BOOR 50-59 years, female 151.6
GTEX-15UF6-2126-SM-6M46Z 70-79 years, female 148.7
GTEX-WRHU-2926-SM-4MVNQ 50-59 years, female 148.5
GTEX-145LS-2526-SM-5TDC9 60-69 years, female 146.3
GTEX-NPJ7-2526-SM-EV79A 60-69 years, female 145.1
GTEX-14DAQ-2326-SM-5S2QX 60-69 years, female 144.4
GTEX-1GN1U-2426-SM-9KNTU 50-59 years, female 144.2
GTEX-1HBPH-2926-SM-9WPNX 40-49 years, female 143.3
GTEX-15DYW-2926-SM-6PANA 60-69 years, female 143.0
GTEX-P4PP-2526-SM-3P61P 30-39 years, female 142.6
GTEX-PLZ4-2726-SM-3P61A 50-59 years, female 140.8
GTEX-1LH75-1726-SM-DHXKZ 50-59 years, female 139.7
GTEX-13QIC-1826-SM-5J1MY 60-69 years, female 138.3
GTEX-T2IS-1926-SM-4DM74 20-29 years, female 138.3
GTEX-1HFI7-1126-SM-A96S5 50-59 years, female 137.6
GTEX-1F48J-2526-SM-7P8TU 50-59 years, female 137.5
GTEX-11TTK-2726-SM-5GU58 60-69 years, female 136.5
GTEX-1J8EW-2526-SM-CKZO2 60-69 years, female 135.2
GTEX-SN8G-2626-SM-EXUQT 50-59 years, female 133.8
GTEX-QDT8-2526-SM-48TYX 30-39 years, female 131.2
GTEX-17JCI-2526-SM-7DHLB 60-69 years, female 131.0
GTEX-131YS-2426-SM-5J2OD 60-69 years, female 130.8
GTEX-1EWIQ-2326-SM-7IGNF 70-79 years, female 129.5
GTEX-ZVT3-2726-SM-5GU5X 60-69 years, female 127.3
GTEX-1ICG6-1626-SM-ARL81 70-79 years, female 126.0
GTEX-OHPN-2426-SM-E9TI5 60-69 years, female 115.5
GTEX-1JN1M-2326-SM-ARZNG 60-69 years, female 97.8
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VAGINA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

1318.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Vagina
Scaled Tags Per Million: 1318.0
FF:10204-103F6 68 years, female 1318.0

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