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TISSUE PRIMARY DATA VAGINA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Vagina
Tissue proteome
Vagina
VAGINA - Expression summary
Protein expression
Vaginai

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Squamous epithelial cells: High
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:667.3 nTPM
GTEx:667.3 nTPM
FANTOM5:689.4 Scaled Tags Per Million

VAGINA - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA041344Antibody HPA049132Antibody CAB013048
Squamous epithelial cells HighHighMedium





VAGINA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

667.3
GTEx sample id Sample description nTPM
Vagina
Average nTPM: 667.3
Samples: 156

Max nTPM: 5205.5
Min nTPM: 259.4
Std nTPM: 392.3
Median nTPM: 625.1
GTEX-14AS3-1726-SM-5RQJV 40-49 years, female 5205.5
GTEX-17F9Y-2326-SM-7DUFP 70-79 years, female 1292.0
GTEX-1HCU8-2026-SM-9YFLE 60-69 years, female 1031.2
GTEX-1AMFI-1526-SM-73KVY 50-59 years, female 983.5
GTEX-1IE54-2626-SM-CMKFY 40-49 years, female 979.9
GTEX-12WSD-2926-SM-5LZUH 60-69 years, female 978.3
GTEX-YJ8O-1226-SM-5P9JE 40-49 years, female 955.3
GTEX-Q734-1426-SM-DTXFX 40-49 years, female 947.3
GTEX-NPJ7-2526-SM-EV79A 60-69 years, female 928.9
GTEX-N7MT-1926-SM-3LK5N 60-69 years, female 923.5
GTEX-113JC-1926-SM-5N9GE 50-59 years, female 917.7
GTEX-WRHU-2926-SM-4MVNQ 50-59 years, female 915.0
GTEX-ZQG8-1126-SM-51MRL 60-69 years, female 885.6
GTEX-QVJO-2526-SM-CYPRA 60-69 years, female 879.2
GTEX-XV7Q-1626-SM-4BRWC 40-49 years, female 845.0
GTEX-13D11-1326-SM-5IJFY 50-59 years, female 840.4
GTEX-ZC5H-2226-SM-4WAWS 40-49 years, female 830.9
GTEX-11EMC-1926-SM-5A5JU 60-69 years, female 818.0
GTEX-Y114-1926-SM-4TT8J 50-59 years, female 815.6
GTEX-15ER7-2526-SM-7KUFW 20-29 years, female 803.1
GTEX-146FH-2626-SM-5Q5E1 50-59 years, female 791.7
GTEX-WEY5-0826-SM-4LMIH 40-49 years, female 785.5
GTEX-13N11-1526-SM-5L3FL 50-59 years, female 780.6
GTEX-SN8G-2626-SM-EXUQT 50-59 years, female 780.3
GTEX-QCQG-1226-SM-48U23 50-59 years, female 775.2
GTEX-14JG6-0726-SM-69LQH 30-39 years, female 774.9
GTEX-XUZC-1226-SM-4BRVJ 30-39 years, female 772.0
GTEX-16NPV-2526-SM-6M483 50-59 years, female 770.7
GTEX-T2IS-1926-SM-4DM74 20-29 years, female 770.1
GTEX-18D9A-1026-SM-7KFRU 30-39 years, female 769.0
GTEX-1EWIQ-2326-SM-7IGNF 70-79 years, female 768.4
GTEX-PX3G-2526-SM-48TZV 20-29 years, female 758.8
GTEX-13QIC-1826-SM-5J1MY 60-69 years, female 755.5
GTEX-1NUQO-1826-SM-E6CQU 20-29 years, female 729.5
GTEX-1MCYP-1326-SM-EV7AD 20-29 years, female 723.8
GTEX-1QCLZ-2226-SM-DTX7R 60-69 years, female 713.6
GTEX-RU1J-1426-SM-46MUV 20-29 years, female 712.0
GTEX-ZGAY-2226-SM-4YCCX 40-49 years, female 709.8
GTEX-PLZ4-2726-SM-3P61A 50-59 years, female 706.5
GTEX-14DAQ-2326-SM-5S2QX 60-69 years, female 692.7
GTEX-14PJM-2926-SM-69LOE 50-59 years, female 692.5
GTEX-11EM3-1826-SM-5A5KO 20-29 years, female 691.8
GTEX-S4UY-1326-SM-4AD4X 40-49 years, female 683.6
GTEX-1HBPH-2926-SM-9WPNX 40-49 years, female 678.8
GTEX-Y8LW-1426-SM-5RQJJ 50-59 years, female 678.3
GTEX-11P81-2126-SM-5HL6N 30-39 years, female 673.7
GTEX-18A7A-2826-SM-7LT8J 50-59 years, female 667.7
GTEX-1I4MK-1726-SM-ARL7O 50-59 years, female 664.7
GTEX-W5WG-1026-SM-4LMIF 50-59 years, female 662.8
GTEX-13U4I-2026-SM-5LU3L 40-49 years, female 662.4
GTEX-13OVI-0926-SM-5J1MI 60-69 years, female 661.0
GTEX-XUW1-0326-SM-4BOOR 50-59 years, female 660.7
GTEX-15DYW-2926-SM-6PANA 60-69 years, female 657.5
GTEX-131XG-2126-SM-5DUXG 50-59 years, female 655.3
GTEX-14PKU-1326-SM-6871B 40-49 years, female 655.3
GTEX-ZE7O-2426-SM-57WD7 50-59 years, female 654.9
GTEX-145ME-1426-SM-5RQJS 40-49 years, female 654.5
GTEX-RWS6-1726-SM-47JXP 60-69 years, female 651.3
GTEX-11TTK-2726-SM-5GU58 60-69 years, female 650.9
GTEX-Y3IK-2226-SM-4YCD4 50-59 years, female 648.2
GTEX-1PIEJ-1926-SM-EVYB7 20-29 years, female 647.6
GTEX-15SDE-1726-SM-6LPJS 50-59 years, female 642.7
GTEX-ZVT3-2726-SM-5GU5X 60-69 years, female 639.0
GTEX-15SHU-2926-SM-7KUKT 40-49 years, female 638.4
GTEX-ZLWG-1126-SM-4WWFQ 50-59 years, female 638.3
GTEX-14PJ6-1626-SM-6872D 60-69 years, female 637.8
GTEX-1F48J-2526-SM-7P8TU 50-59 years, female 636.3
GTEX-ZAK1-2426-SM-EXOHM 50-59 years, female 635.7
GTEX-1399U-1526-SM-5J2N7 50-59 years, female 634.3
GTEX-OHPL-2526-SM-3MJGT 60-69 years, female 634.0
GTEX-12WSJ-1326-SM-5GCOB 40-49 years, female 633.6
GTEX-1S5ZU-2626-SM-E9TII 20-29 years, female 630.7
GTEX-ZYY3-2626-SM-5N9DH 60-69 years, female 629.7
GTEX-1QPFJ-1626-SM-DTX7X 30-39 years, female 627.2
GTEX-13PL7-2726-SM-5L3GB 60-69 years, female 626.4
GTEX-14BMU-1926-SM-5S2QC 20-29 years, female 626.2
GTEX-183WM-2126-SM-7LG4I 70-79 years, female 625.8
GTEX-TML8-1126-SM-4DXSS 40-49 years, female 625.6
GTEX-147F3-1526-SM-5SIAK 50-59 years, female 624.6
GTEX-X15G-1926-SM-4PQZQ 50-59 years, female 617.9
GTEX-11GSP-2226-SM-5HL5Q 60-69 years, female 615.2
GTEX-1QP28-1426-SM-EVR4E 50-59 years, female 612.2
GTEX-S7SF-1426-SM-4AT5A 20-29 years, female 611.1
GTEX-P78B-2226-SM-3P5ZZ 40-49 years, female 608.6
GTEX-145LS-2526-SM-5TDC9 60-69 years, female 602.3
GTEX-WYVS-1426-SM-4ONCV 40-49 years, female 601.7
GTEX-15SB6-1426-SM-7KUEM 50-59 years, female 600.9
GTEX-15UF6-2126-SM-6M46Z 70-79 years, female 599.9
GTEX-UJHI-1326-SM-4IHJO 50-59 years, female 599.4
GTEX-13QBU-1726-SM-5IJFQ 40-49 years, female 598.0
GTEX-ZV6S-1326-SM-59HJA 40-49 years, female 595.4
GTEX-17JCI-2526-SM-7DHLB 60-69 years, female 594.4
GTEX-QDT8-2526-SM-48TYX 30-39 years, female 594.2
GTEX-YFC4-2926-SM-5IFJ8 40-49 years, female 593.2
GTEX-1MCC2-1126-SM-EVYD6 30-39 years, female 592.9
GTEX-146FR-2426-SM-5NQAU 60-69 years, female 592.8
GTEX-1GN1U-2426-SM-9KNTU 50-59 years, female 587.8
GTEX-12ZZX-1926-SM-5EGKC 40-49 years, female 587.4
GTEX-11DXX-1726-SM-5H11T 60-69 years, female 584.8
GTEX-13W3W-2326-SM-5LU4Y 60-69 years, female 584.5
GTEX-1GMR8-2526-SM-7RHI9 50-59 years, female 584.4
GTEX-14A5I-2726-SM-5SIB3 50-59 years, female 576.0
GTEX-ZP4G-0826-SM-4WWF3 20-29 years, female 571.2
GTEX-P4PP-2526-SM-3P61P 30-39 years, female 571.1
GTEX-ZZPU-2226-SM-5EGIV 50-59 years, female 571.0
GTEX-16NGA-1626-SM-72D6M 40-49 years, female 570.9
GTEX-1HCUA-1026-SM-A9SMI 50-59 years, female 566.4
GTEX-S341-1226-SM-4AD5S 40-49 years, female 562.0
GTEX-T6MO-1226-SM-4DM5S 40-49 years, female 561.2
GTEX-1GN1W-1526-SM-7P8TG 50-59 years, female 561.1
GTEX-OHPN-2426-SM-E9TI5 60-69 years, female 560.6
GTEX-14H4A-2426-SM-664OQ 40-49 years, female 558.7
GTEX-1F5PL-1826-SM-7P8PP 40-49 years, female 557.4
GTEX-1LVAN-1626-SM-CNPQ7 50-59 years, female 555.1
GTEX-ZVT2-0626-SM-5GICR 50-59 years, female 553.3
GTEX-1LVAM-1926-SM-E6CIM 50-59 years, female 552.1
GTEX-TMMY-1926-SM-4DXUU 40-49 years, female 548.4
GTEX-131YS-2426-SM-5J2OD 60-69 years, female 547.0
GTEX-U3ZN-0926-SM-4DXTU 30-39 years, female 546.7
GTEX-1LNCM-1026-SM-E9U5D 50-59 years, female 545.9
GTEX-1JN1M-2326-SM-ARZNG 60-69 years, female 545.6
GTEX-1LGRB-2126-SM-COH48 50-59 years, female 545.2
GTEX-1R9JW-1426-SM-DTX9K 30-39 years, female 540.3
GTEX-1117F-2526-SM-5GZY6 60-69 years, female 528.8
GTEX-14PN3-1626-SM-6AJAV 60-69 years, female 527.6
GTEX-13PVR-1426-SM-5S2PW 60-69 years, female 526.1
GTEX-1JN76-1526-SM-CNPPF 20-29 years, female 518.4
GTEX-OHPK-2526-SM-3MJH9 50-59 years, female 512.6
GTEX-1A8FM-2426-SM-7IGPE 50-59 years, female 505.6
GTEX-SE5C-1126-SM-4BRWZ 40-49 years, female 504.8
GTEX-ZTPG-2226-SM-57WF9 20-29 years, female 503.6
GTEX-1J8EW-2526-SM-CKZO2 60-69 years, female 497.4
GTEX-PWCY-1726-SM-48TD3 20-29 years, female 496.9
GTEX-1IDJU-1026-SM-AHZ2U 60-69 years, female 493.8
GTEX-S4P3-1126-SM-4AD52 50-59 years, female 493.6
GTEX-1HFI7-1126-SM-A96S5 50-59 years, female 493.2
GTEX-ZXES-0626-SM-5E45P 30-39 years, female 492.5
GTEX-11XUK-1326-SM-5EQM4 40-49 years, female 490.1
GTEX-11I78-2026-SM-5987C 50-59 years, female 489.1
GTEX-1HBPM-2726-SM-9WYUA 60-69 years, female 482.0
GTEX-11VI4-0726-SM-5GU5B 40-49 years, female 477.1
GTEX-1LGOU-1126-SM-D3LAI 20-29 years, female 473.7
GTEX-1CAMS-2326-SM-793CR 40-49 years, female 470.8
GTEX-1C475-0526-SM-793AC 40-49 years, female 465.2
GTEX-1J1OQ-1826-SM-CL53R 40-49 years, female 462.6
GTEX-TSE9-2526-SM-4DXUS 60-69 years, female 458.4
GTEX-1I1GT-1226-SM-B2LVK 60-69 years, female 455.0
GTEX-PWN1-2526-SM-48TDS 40-49 years, female 452.0
GTEX-1HCU6-2326-SM-ACKXP 60-69 years, female 450.3
GTEX-ZYVF-0326-SM-5GIES 50-59 years, female 448.1
GTEX-1ICG6-1626-SM-ARL81 70-79 years, female 440.4
GTEX-X8HC-2826-SM-46MWJ 50-59 years, female 434.7
GTEX-1399S-2326-SM-5K7YV 30-39 years, female 419.6
GTEX-1GF9U-1926-SM-7P8TZ 40-49 years, female 418.8
GTEX-1LH75-1726-SM-DHXKZ 50-59 years, female 366.8
GTEX-1JMQL-2326-SM-CNNPV 50-59 years, female 259.4
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VAGINA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

689.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Vagina
Scaled Tags Per Million: 689.4
FF:10204-103F6 68 years, female 689.4

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