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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:275.3 nTPM
HPA Brain:284.6 nTPM
GTEx:275.3 nTPM
FANTOM5:79.1 Scaled Tags Per Million
Mouse:657.9 nTPM
Allen mouse:21.4 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA042528
Glial cells Not detected
Neuronal cells Medium



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

284.6
Sample id Sample description nTPM
Caudate nucleus
nTPM: 203.8
2481 Female, age 94, left hemisphere 285.2
2288 Male, age 75, left hemisphere 229.5
1781 Male, age 74, unknown 221.2
2290 Female, age 72, unknown 203.7
1857 Female, age 85, left hemisphere 192.6
2846 Female, age 79, unknown 178.4
1854 Male, age 80, left hemisphere 176.1
2289 Male, age 61, right hemisphere 143.8
Globus pallidus, externus
nTPM: 202.4
2772 Female, age 79, unknown 263.0
1996 Male, age 80, right hemisphere 218.6
2395 Male, age 75, both hemispheres 217.4
2646 Male, age 61, right hemisphere 191.7
2567 Female, age 72, unknown 121.4
Globus pallidus, internus
nTPM: 205.9
2483 Female, age 94, right hemisphere 347.8
2287 Male, age 75, right hemisphere 256.1
1818 Male, age 74, unknown 207.1
2778 Female, age 91, both hemispheres 188.9
2037 Male, age 80, right hemisphere 186.5
2566 Female, age 72, unknown 129.7
2111 Female, age 85, right hemisphere 125.0
Nucleus accumbens
nTPM: 203.9
2286 Male, age 75, left hemisphere 269.6
1856 Female, age 91, right hemisphere 246.2
1783 Male, age 74, unknown 208.2
1806 Female, age 85, left hemisphere 200.9
2391 Female, age 94, left hemisphere 196.0
2698 Female, age 72, unknown 180.3
2824 Male, age 61, right hemisphere 179.2
2732 Male, age 80, right hemisphere 150.6
Nucleus basalis of Meynert
nTPM: 186.3
2484 Female, age 94, left hemisphere 207.1
2569 Male, age 61, both hemispheres 199.1
2821 Male, age 75, both hemispheres 176.4
2393 Male, age 80, right hemisphere 162.7
Nucleus of the diagonal band
nTPM: 284.6
2775 Male, age 80, right hemisphere 355.9
1812 Female, age 91, both hemispheres 328.8
2195 Female, age 85, both hemispheres 279.7
2029 Male, age 61, right hemisphere 237.0
1979 Male, age 74, unknown 221.7
Putamen
nTPM: 191.3
2482 Female, age 94, left hemisphere 258.2
1937 Female, age 91, right hemisphere 206.2
2466 Female, age 79, unknown 204.1
2647 Male, age 75, left hemisphere 192.5
1838 Male, age 80, right hemisphere 181.1
1829 Male, age 74, unknown 160.8
2489 Female, age 72, unknown 136.3
Septal nuclei
nTPM: 247.9
1960 Male, age 74, unknown 361.1
2031 Female, age 72, unknown 319.3
2009 Female, age 91, both hemispheres 252.1
2059 Female, age 85, both hemispheres 227.1
2199 Male, age 80, right hemisphere 201.9
2629 Female, age 94, right hemisphere 191.7
2394 Male, age 61, left hemisphere 182.3
Stria terminalis, bed nucleus
nTPM: 242.6
1974 Female, age 91, both hemispheres 314.7
2486 Female, age 94, both hemispheres 222.3
2201 Male, age 74, unknown 190.9

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

275.3
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 252.9
Samples: 246

Max nTPM: 591.4
Min nTPM: 119.8
Std nTPM: 57.9
Median nTPM: 245.6
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 591.4
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 433.0
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 432.2
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 414.7
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 410.5
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 396.0
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 394.7
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 387.0
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 359.2
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 357.5
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 357.3
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 356.6
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 352.8
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 348.9
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 348.8
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 344.0
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 340.2
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 339.6
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 339.0
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 335.3
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 333.8
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 329.5
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 328.0
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 323.3
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 321.1
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 320.3
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 318.4
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 314.9
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 310.5
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 307.9
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 307.5
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 301.8
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 301.3
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 300.8
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 300.2
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 299.7
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 299.2
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 298.8
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 298.8
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 298.2
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 296.5
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 294.2
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 293.7
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 293.5
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 293.2
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 292.6
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 289.7
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 288.3
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 288.3
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 288.2
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 287.1
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 286.2
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 285.0
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 284.8
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 283.9
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 283.5
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 282.4
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 282.1
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 281.7
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 280.8
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 280.3
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 280.2
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 279.1
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 279.1
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 278.8
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 278.4
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 277.0
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 276.7
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 276.5
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 276.3
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 276.0
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 275.7
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 275.1
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 274.3
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 273.7
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 273.4
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 272.8
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 272.5
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 272.4
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 272.4
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 270.9
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 270.6
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 270.4
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 270.3
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 270.2
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 268.0
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 267.7
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 267.3
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 267.0
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 266.2
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 265.7
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 265.6
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 265.4
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 264.8
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 264.4
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 263.1
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 263.1
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 263.1
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 262.8
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 262.4
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 262.0
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 262.0
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 261.9
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 261.5
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 261.3
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 259.0
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 258.4
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 257.4
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 257.1
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 256.0
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 254.6
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 253.6
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 252.6
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 252.4
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 251.8
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 251.7
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 249.8
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 248.9
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 248.2
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 247.4
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 247.2
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 246.7
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 246.4
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 244.7
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 243.8
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 243.6
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 243.4
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 243.2
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 242.7
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 242.4
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 242.1
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 241.8
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 241.3
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 240.3
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 240.2
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 239.8
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 239.7
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 239.4
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 239.2
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 239.1
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 238.6
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 238.4
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 238.1
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 237.5
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 237.4
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 237.2
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 236.6
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 236.2
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 235.2
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 235.2
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 234.9
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 234.7
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 233.4
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 233.3
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 232.9
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 232.8
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 232.8
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 232.3
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 232.2
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 231.2
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 230.2
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 230.0
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 229.4
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 229.2
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 228.5
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 227.5
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 226.9
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 226.7
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 226.0
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 225.7
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 225.2
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 225.0
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 224.9
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 224.5
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 224.2
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 222.3
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 221.4
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 220.8
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 220.6
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 220.1
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 218.9
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 218.5
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 218.2
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 218.0
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 217.8
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 216.8
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 216.4
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 216.2
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 216.2
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 215.2
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 215.1
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 214.3
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 212.6
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 211.9
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 210.3
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 209.8
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 209.6
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 209.4
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 207.7
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 207.6
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 207.5
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 207.4
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 207.3
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 207.0
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 205.7
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 205.2
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 205.2
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 202.8
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 202.7
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 202.2
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 202.0
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 201.9
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 201.3
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 199.5
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 197.8
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 197.8
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 194.7
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 193.7
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 192.1
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 191.9
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 188.8
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 186.6
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 185.3
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 182.4
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 182.4
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 182.0
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 181.0
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 180.2
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 178.4
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 172.4
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 171.7
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 170.9
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 170.8
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 169.9
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 166.0
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 164.1
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 164.1
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 162.3
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 161.6
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 151.2
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 149.1
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 148.3
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 137.4
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 137.1
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 123.4
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 119.8
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 256.9
Samples: 246

Max nTPM: 478.6
Min nTPM: 141.6
Std nTPM: 56.0
Median nTPM: 256.7
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 478.6
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 429.9
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 391.2
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 386.9
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 380.5
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 371.3
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 368.2
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 366.8
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 358.3
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 354.5
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 349.2
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 344.7
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 343.5
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 342.2
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 340.9
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 340.8
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 338.7
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 336.8
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 335.5
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 331.9
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 331.3
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 330.2
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 328.8
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 328.3
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 325.9
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 324.7
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 324.5
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 324.2
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 322.1
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 319.8
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 317.7
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 315.7
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 315.7
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 315.5
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 314.2
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 314.0
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 313.6
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 312.0
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 311.2
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 310.9
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 309.8
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 309.6
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 309.0
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 308.8
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 308.6
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 307.7
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 306.8
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 305.5
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 305.3
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 304.7
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 304.4
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 303.8
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 302.9
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 302.2
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 300.4
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 299.3
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 299.1
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 298.8
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 298.1
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 297.3
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 297.3
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 294.2
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 294.2
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 294.1
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 293.1
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 291.1
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 291.0
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 289.2
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 288.5
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 287.9
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 286.6
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 285.2
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 284.3
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 283.2
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 282.2
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 281.9
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 280.2
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 279.8
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 279.5
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 278.3
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 278.2
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 278.1
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 278.1
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 278.1
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 277.7
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 277.5
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 276.8
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 276.7
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 276.4
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 276.3
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 276.2
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 276.0
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 276.0
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 275.7
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 275.2
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 274.5
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 273.6
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 270.6
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 270.3
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 268.7
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 267.5
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 267.4
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 266.9
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 265.9
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 265.9
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 265.4
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 265.3
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 263.9
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 263.6
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 262.3
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 262.1
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 261.4
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 261.4
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 260.8
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 260.5
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 260.2
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 259.5
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 259.2
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 258.5
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 257.7
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 257.2
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 257.1
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 257.0
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 256.4
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 255.5
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 255.2
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 255.1
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 253.5
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 253.4
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 253.3
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 251.6
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 251.0
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 250.3
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 249.2
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 248.5
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 248.1
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 247.7
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 246.2
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 245.8
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 245.8
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 245.4
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 245.1
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 244.7
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 244.6
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 244.0
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 243.9
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 243.6
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 242.9
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 242.7
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 242.0
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 241.8
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 241.5
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 240.5
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 239.8
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 239.2
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 239.0
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 238.4
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 238.3
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 238.2
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 238.1
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 237.8
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 237.5
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 235.7
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 235.6
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 235.1
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 233.0
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 232.8
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 232.3
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 231.6
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 231.0
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 230.4
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 230.0
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 229.5
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 228.6
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 226.9
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 226.4
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 224.3
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 223.6
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 222.7
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 222.5
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 222.0
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 220.8
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 219.4
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 219.1
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 217.4
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 217.3
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 216.8
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 215.9
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 215.1
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 211.8
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 211.3
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 209.9
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 209.4
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 209.4
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 207.2
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 207.2
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 206.9
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 206.7
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 206.6
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 206.5
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 202.8
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 202.1
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 201.5
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 201.5
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 199.8
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 199.3
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 198.6
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 197.8
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 196.5
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 195.5
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 194.4
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 194.0
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 193.6
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 193.6
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 192.9
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 189.6
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 188.1
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 187.9
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 186.3
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 186.2
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 184.7
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 184.2
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 184.0
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 182.4
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 182.1
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 178.5
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 177.0
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 176.9
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 170.8
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 166.3
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 165.9
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 165.7
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 165.1
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 162.4
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 160.3
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 159.6
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 159.6
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 158.5
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 156.8
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 155.3
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 152.7
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 149.8
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 147.5
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 145.8
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 144.6
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 141.6
Show allShow less
Brain - Putamen (basal ganglia)
Average nTPM: 275.3
Samples: 205

Max nTPM: 556.3
Min nTPM: 134.9
Std nTPM: 58.6
Median nTPM: 269.9
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 556.3
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 430.8
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 423.5
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 418.5
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 418.3
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 416.7
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 416.3
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 392.2
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 388.8
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 385.1
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 380.3
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 379.0
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 376.5
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 371.4
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 370.1
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 368.7
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 368.2
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 365.2
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 364.4
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 358.5
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 355.5
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 351.3
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 349.4
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 348.3
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 346.5
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 340.9
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 339.5
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 337.9
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 334.1
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 334.1
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 333.7
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 330.8
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 329.6
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 328.0
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 327.7
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 323.5
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 321.2
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 320.6
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 319.8
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 317.7
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 317.7
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 316.1
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 313.7
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 311.3
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 309.9
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 303.8
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 302.7
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 301.9
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 301.5
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 301.3
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 299.3
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 298.1
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 297.0
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 296.8
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 296.5
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 295.4
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 295.0
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 293.7
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 292.7
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 292.4
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 292.3
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 291.5
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 291.3
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 289.8
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 288.8
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 287.0
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 286.6
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 286.1
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 286.0
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 283.8
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 283.7
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 282.7
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 282.6
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 282.4
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 281.8
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 280.0
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 279.9
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 279.9
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 279.4
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 278.3
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 277.9
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 277.8
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 277.7
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 277.0
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 276.5
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 276.1
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 275.2
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 275.1
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 275.0
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 274.8
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 274.2
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 273.7
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 273.6
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 272.9
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 272.6
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 272.2
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 272.1
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 272.1
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 271.7
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 270.6
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 270.5
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 270.2
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 269.9
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 269.5
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 269.5
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 267.9
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 267.8
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 267.4
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 267.0
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 267.0
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 266.6
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 266.3
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 266.0
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 264.6
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 263.7
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 263.0
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 262.8
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 262.4
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 262.1
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 261.7
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 261.7
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 261.4
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 261.1
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 260.5
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 259.8
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 259.5
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 257.8
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 257.7
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 254.7
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 254.5
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 254.4
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 253.5
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 253.4
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 253.3
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 252.2
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 251.9
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 251.7
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 250.9
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 250.6
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 249.9
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 249.9
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 249.5
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 248.7
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 248.6
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 247.2
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 247.2
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 244.5
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 244.3
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 244.3
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 243.7
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 243.6
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 243.4
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 242.6
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 241.1
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 239.5
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 238.1
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 237.5
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 237.0
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 236.8
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 236.5
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 236.2
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 234.9
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 234.9
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 233.6
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 232.7
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 232.5
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 232.3
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 231.4
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 230.8
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 229.8
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 228.6
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 228.6
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 228.0
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 223.2
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 223.0
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 222.7
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 222.6
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 222.0
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 221.0
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 219.8
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 218.4
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 216.5
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 216.4
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 215.4
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 213.1
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 212.7
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 210.5
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 206.1
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 204.2
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 196.2
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 196.2
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 196.1
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 194.8
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 191.8
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 186.5
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 185.3
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 179.6
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 174.0
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 171.3
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 169.7
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 166.8
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 156.5
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 148.3
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 139.3
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 134.9
Show allShow less

BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

79.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 54.4
FF:10164-103B2 76 years, female 54.4
Nucleus accumbens
Scaled Tags Per Million: 79.1
FF:10037-101F1 23-56 years, mixed 79.1
Putamen
Scaled Tags Per Million: 64.1
FF:10176-103C5 60 years, female 64.1
Globus pallidus
Scaled Tags Per Million: 41.6
FF:10175-103C4 60 years, female 47.8
FF:10161-103A8 76 years, female 35.3

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

657.9
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 541.6
Samples: 4

Max nTPM: 561.3
Min nTPM: 524.5
Sample A Male 534.8
Sample B Male 545.8
Sample C Female 524.5
Sample D Female 561.3
Septum
nTPM: 657.9
Samples: 4

Max nTPM: 693.7
Min nTPM: 584.0
Sample A Male 669.3
Sample B Male 684.7
Sample C Female 693.7
Sample D Female 584.0
Ventral forebrain
nTPM: 657.9
Samples: 4

Max nTPM: 726.2
Min nTPM: 614.9
Sample A Male 614.9
Sample B Male 658.5
Sample C Female 726.2
Sample D Female 631.8

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

21.4
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 21.4
513469 Antisense, RP_040810_01_F11, Mouse strain C57BL/6J (56 days, male) 21.4
Pallidum
Expression energy: 20.3
513469 Antisense, RP_040810_01_F11, Mouse strain C57BL/6J (56 days, male) 20.3

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