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RPS21
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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: High
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
GTEx:985.0 nTPM
FANTOM5:217.5 Scaled Tags Per Million
Pig:335.1 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA003371
Glial cells Not detected
Neuronal cells High



CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

985.0
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 985.0
Samples: 246

Max nTPM: 3107.1
Min nTPM: 477.1
Std nTPM: 346.6
Median nTPM: 909.6
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 3107.1
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 2810.0
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 2484.6
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 2308.2
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 2118.4
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 2091.2
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 1997.7
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 1737.7
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 1648.0
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 1585.0
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 1557.1
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 1546.6
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 1504.4
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 1487.0
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 1475.4
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 1422.0
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 1414.6
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 1403.0
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 1400.0
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 1397.2
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 1396.9
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 1372.6
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 1365.8
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 1363.1
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 1356.9
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 1339.6
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 1334.7
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 1332.3
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 1316.0
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 1314.6
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 1305.9
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 1302.9
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 1293.5
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 1287.5
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 1278.4
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 1268.3
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 1263.4
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 1256.5
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 1245.2
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 1234.2
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 1231.8
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 1213.8
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 1211.0
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 1208.5
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 1199.5
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 1188.6
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 1185.0
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 1174.1
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 1170.6
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 1162.4
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 1159.5
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 1149.2
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 1136.4
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 1136.3
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 1129.3
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 1125.1
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 1125.1
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 1120.9
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 1116.9
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 1115.5
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 1115.2
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 1110.1
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 1110.0
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 1095.7
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 1091.6
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 1089.0
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 1082.7
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 1081.6
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 1078.5
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 1077.8
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 1067.3
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 1066.9
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 1064.3
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 1061.3
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 1053.6
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 1042.5
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 1037.1
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 1036.4
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 1034.9
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 1024.8
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 1019.8
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 1014.5
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 1013.1
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 1004.7
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 1001.8
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 1001.6
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 998.2
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 993.8
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 987.4
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 983.0
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 981.5
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 980.8
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 979.2
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 976.9
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 967.2
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 961.2
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 957.7
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 953.7
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 952.0
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 943.4
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 943.4
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 942.9
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 942.5
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 942.4
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 940.2
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 936.8
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 936.6
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 935.5
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 934.4
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 932.5
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 931.3
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 930.3
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 925.4
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 923.3
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 923.1
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 921.5
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 921.2
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 920.8
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 920.3
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 919.8
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 916.8
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 916.2
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 911.5
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 907.6
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 904.4
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 903.4
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 900.9
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 898.1
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 897.6
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 897.3
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 897.1
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 896.3
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 894.5
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 891.9
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 891.2
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 891.0
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 886.7
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 882.1
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 880.6
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 879.8
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 874.3
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 867.6
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 867.0
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 865.0
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 864.5
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 863.9
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 860.4
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 854.6
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 854.0
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 852.3
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 851.8
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 851.2
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 849.3
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 848.9
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 846.2
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 844.6
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 843.6
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 834.9
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 831.2
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 830.8
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 827.1
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 826.5
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 825.7
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 823.9
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 821.3
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 820.2
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 819.0
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 818.4
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 816.4
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 813.3
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 812.8
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 810.4
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 805.2
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 803.9
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 803.9
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 800.9
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 800.0
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 797.2
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 794.6
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 794.4
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 793.6
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 791.0
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 790.1
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 788.2
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 787.5
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 780.1
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 779.9
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 778.8
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 777.1
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 774.2
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 767.5
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 767.5
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 760.5
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 760.5
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 760.5
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 760.0
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 759.3
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 758.7
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 758.1
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 757.1
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 756.5
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 754.1
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 749.2
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 745.7
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 740.1
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 738.8
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 734.1
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 734.0
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 733.7
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 732.6
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 730.1
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 726.7
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 723.6
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 714.6
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 710.0
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 704.8
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 691.0
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 690.9
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 682.7
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 675.9
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 671.7
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 656.4
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 654.0
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 653.6
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 648.7
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 648.7
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 648.3
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 640.7
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 640.6
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 637.3
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 629.4
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 620.3
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 615.2
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 608.4
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 605.9
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 587.2
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 585.5
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 568.0
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 545.4
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 542.6
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 528.3
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 526.5
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 513.0
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 497.7
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 493.0
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 477.1
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

217.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 217.5
FF:10164-103B2 76 years, female 217.5

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

335.1
Pig sample Sample description nTPM
Caudate
nTPM: 335.2
Samples: 4

Max nTPM: 357.8
Min nTPM: 298.7
Sample A Female 347.3
Sample B Female 357.8
Sample C Male 336.8
Sample D Male 298.7

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