HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Not detected
Mouse brain, Intensity
Hippocampal formationi 		96.220
RNA expressioni
Consensus:126.9 nTPM
HPA Brain:572.1 nTPM
GTEx:126.9 nTPM
FANTOM5:938.4 Scaled Tags Per Million
Pig:542.6 nTPM
Mouse:98.2 nTPM
Allen mouse:4.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA014784Antibody CAB005079Antibody CAB058689
Glial cells Not detectedNot detectedNot detected
Neuronal cells Not detectedNot detectedNot detected



HIPPOCAMPAL FORMATION - Mouse brain profilei , antibody CAB005079
Hippocampal formation mean intensity 96.220
intensityi
FRONT BACK
Polymorph layer of the dentate gyrus 74.560
Molecular layer of the dentate gyrus 88.850
Granular dentate gyrus 55.134
CA1 - oriens layer 66.510
CA1 - pyramidal layer 54.625
CA1 - radiatum layer 73.433
CA2 - oriens layer 71.081
CA2 - pyramidal layer 72.184
CA2 - radiatum layer 74.893
CA3 - oriens layer 62.562
CA3 - pyramidal layer 51.724
CA3 - radiatum layer 72.362
Stratum lucidum 64.026
Lacunosum moleculare 89.215
Subiculum 64.071

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 572.1
Sample id Sample description nTPM
Hippocampus
nTPM: 572.1
2529 Female, age 94, left hemisphere 718.1
2148 Female, age 91, left hemisphere 624.0
1898 Male, age 80, left hemisphere 595.5
1911 Female, age 85, right hemisphere 566.7
1855 Male, age 76, left hemisphere 532.1
2621 Female, age 67, right hemisphere 396.3
Dentate gyrus
nTPM: 492.8
2528 Male, age 74, both hemispheres 904.9
2246 Female, age 85, both hemispheres 510.8
2530 Female, age 94, left hemisphere 448.3
2010 Male, age 76, both hemispheres 431.8
1927 Female, age 91, both hemispheres 410.7
2531 Female, age 67, both hemispheres 250.0
Entorhinal gyrus
nTPM: 384.0
2117 Female, age 91, right hemisphere 778.5
1787 Male, age 76, left hemisphere 422.5
1938 Female, age 85, left hemisphere 400.8
2764 Male, age 80, right hemisphere 288.4
2686 Male, age 75, right hemisphere 219.1
2613 Female, age 94, left hemisphere 194.7
Hippocampus, CA1
nTPM: 480.6
2527 Male, age 74, both hemispheres 800.5
1873 Female, age 85, both hemispheres 546.2
2082 Female, age 91, right hemisphere 423.7
2045 Male, age 76, both hemispheres 390.8
2749 Male, age 80, left hemisphere 242.0
Hippocampus, CA2
nTPM: 488.0
2249 Male, age 74, both hemispheres 946.4
2113 Female, age 91, right hemisphere 539.5
1940 Female, age 85, left hemisphere 453.1
1963 Male, age 80, left hemisphere 392.8
2437 Female, age 94, left hemisphere 353.8
1892 Male, age 76, both hemispheres 242.2
Hippocampus, CA3
nTPM: 431.0
2436 Male, age 74, both hemispheres 704.0
1891 Female, age 85, both hemispheres 577.3
2620 Female, age 94, left hemisphere 468.3
1867 Male, age 76, both hemispheres 306.7
2137 Male, age 80, left hemisphere 279.9
2861 Female, age 67, both hemispheres 249.6
Parahippocampal cortex
nTPM: 365.1
2250 Female, age 67, right hemisphere 594.8
2018 Male, age 76, both hemispheres 452.3
2692 Male, age 74, both hemispheres 410.2
1990 Female, age 91, right hemisphere 384.0
2245 Female, age 91, both hemispheres 380.8
1933 Female, age 85, both hemispheres 363.7
1850 Male, age 80, both hemispheres 353.2
2622 Female, age 67, right hemisphere 277.3
2693 Female, age 94, both hemispheres 228.9
2532 Female, age 72, left hemisphere 205.7
Perirhinal gyrus
nTPM: 341.8
1794 Male, age 80, right hemisphere 381.7
1847 Female, age 91, left hemisphere 374.9
2521 Female, age 94, right hemisphere 351.9
1841 Female, age 85, right hemisphere 322.7
2848 Male, age 76, right hemisphere 277.8
Subiculum
nTPM: 487.9
2729 Female, age 91, right hemisphere 822.2
2619 Male, age 74, both hemispheres 533.7
1977 Female, age 85, both hemispheres 414.5
2042 Male, age 76, both hemispheres 398.1
2438 Female, age 94, left hemisphere 388.5
1901 Male, age 80, both hemispheres 370.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 126.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 126.9
Samples: 197

Max nTPM: 473.3
Min nTPM: 10.3
Std nTPM: 84.6
Median nTPM: 99.3
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 473.3
GTEX-QDT8-0011-R1A-SM-32PKS 30-39 years, female 414.4
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 407.7
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 375.4
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 358.1
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 344.8
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 333.5
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 328.3
GTEX-11ZVC-0011-R1b-SM-5BC6M 50-59 years, female 309.3
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 299.0
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 297.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 938.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 938.4
FF:10153-102I9 76 years, female 1229.8
FF:10169-103B7 60 years, female 647.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 542.6
Pig sample Sample description nTPM
Subiculum
nTPM: 542.6
Samples: 4

Max nTPM: 555.0
Min nTPM: 525.4
Sample A Female 550.9
Sample B Female 525.4
Sample C Male 539.2
Sample D Male 555.0
Dorsal hippocampus
nTPM: 517.8
Samples: 4

Max nTPM: 712.4
Min nTPM: 368.5
Sample A Female 556.1
Sample B Female 434.2
Sample C Male 712.4
Sample D Male 368.5
Entorhinal cortex
nTPM: 331.3
Samples: 4

Max nTPM: 389.5
Min nTPM: 266.3
Sample A Female 387.1
Sample B Female 282.3
Sample C Male 389.5
Sample D Male 266.3
Ventral hippocampus
nTPM: 499.8
Samples: 4

Max nTPM: 543.6
Min nTPM: 470.5
Sample A Female 543.6
Sample B Female 470.5
Sample C Male 503.1
Sample D Male 481.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 98.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 93.3
Samples: 4

Max nTPM: 101.4
Min nTPM: 82.5
Sample A Male 94.2
Sample B Male 82.5
Sample C Female 95.1
Sample D Female 101.4
Hippocampal formation
nTPM: 98.2
Samples: 4

Max nTPM: 105.5
Min nTPM: 93.0
Sample A Male 105.5
Sample B Male 99.8
Sample C Female 94.4
Sample D Female 93.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 4.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.1
77454660 Antisense, RP_070129_01_C02, Mouse strain C57BL/6J (56 days, male) 5.2
79556722 Antisense, RP_071204_01_E02, Mouse strain C57BL/6J (56 days, male) 4.0
108 Antisense, RP_040324_01_F07, Mouse strain C57BL/6J (56 days, male) 3.2
109 Antisense, RP_040324_01_F07, Mouse strain C57BL/6J (56 days, male) 3.1

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