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  • AQP4
TISSUE PRIMARY DATA HYPOTHALAMUS Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Hypothalamus
HYPOTHALAMUS - Expression summary
Mouse brain, Intensity
Hypothalamusi

Protein expression in mouse brain using immunofluorescence is reported as mean fluorescence intensity .

190.191
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:115.9 nTPM
HPA Brain:924.9 nTPM
GTEx:115.9 nTPM
Pig:602.2 nTPM
Mouse:117.2 nTPM
Allen mouse:3.2 Expression energy

HYPOTHALAMUS - Mouse brain profilei

Protein expression in mouse brain using immunofluorescence is reported as fluorescence intensity .

, antibody CAB005079
Hypothalamus mean intensity 190.191
intensityi

Protein expression in mouse brain using immunofluorescence is reported as mean fluorescence intensity .

FRONT BACK
Dorsal tuberomammillary nucleus 65.749
Mammillary nucleus -
Periventricular hypothalamic nucleus 190.191
Supraoptic nucleus 119.439
Tuberal nucleus 110.050
Ventral tuberomammillary nucleus 94.813
Lateral preoptic area 67.569
Medial preoptic area 78.959
Suprachiasmatic nucleus 125.640
Paraventricular hypothalamic nucleus 78.598
Anterior hypothalamic area, central 55.139
Ventral medial hypothalamic nucleus 95.943
Ventral medial hypothalamic nucleus* -
Arcuate nucleus 126.469
Arcuate nucleus* -
Peduncular part of lateral hypothalmus 55.525
Dorsal medial hypothalamic nucleus 94.778
Stria terminalis* -

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

924.9
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 345.9
2226 Male, age 75, left hemisphere 360.4
1961 Female, age 42, unknown 331.4
Dorsomedial nucleus
nTPM: 500.8
1989 Male, age 62, unknown 685.7
2041 Female, age 72, unknown 408.9
2017 Female, age 42, unknown 407.9
Lateral hypothalamic area
nTPM: 395.1
1791 Male, age 80, right hemisphere 655.0
2271 Male, age 75, both hemispheres 363.9
2412 Male, age 62, unknown 317.6
2228 Male, age 66, unknown 243.9
Mammillary body
nTPM: 612.5
1923 Female, age 72, unknown 699.0
1945 Male, age 80, right hemisphere 684.1
1834 Female, age 42, unknown 659.2
2413 Male, age 66, unknown 630.3
1948 Female, age 72, unknown 389.7
Paraventricular nucleus
nTPM: 263.8
2700 Male, age 62, unknown 263.8
Preoptic area
nTPM: 488.6
1861 Female, age 42, unknown 550.9
1907 Male, age 80, right hemisphere 486.2
2414 Female, age 72, unknown 428.8
Supraoptic nucleus
nTPM: 924.9
1894 Female, age 72, unknown 1313.6
2043 Male, age 62, unknown 1089.4
2835 Female, age 72, unknown 371.7
Ventromedial nucleus
nTPM: 337.1
1822 Female, age 42, unknown 338.6
1982 Female, age 72, unknown 335.7

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

115.9
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 115.9
Samples: 202

Max nTPM: 766.4
Min nTPM: 17.9
Std nTPM: 86.5
Median nTPM: 96.8
GTEX-1H3VE-0011-R8b-SM-A9G1L 40-49 years, male 766.4
GTEX-QDT8-0011-R8A-SM-32PKE 30-39 years, female 562.0
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 448.5
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 350.6
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 329.2
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 297.3
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 275.5
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 266.5
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 255.5
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 254.7
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 254.5
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 250.8
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 245.8
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 234.2
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 234.1
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 227.7
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 224.5
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 223.7
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 221.1
GTEX-14LLW-0011-R8a-SM-62LFG 70-79 years, female 209.2
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 205.9
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 202.4
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 201.5
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 191.6
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 189.3
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 188.3
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 188.3
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 188.0
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 182.0
GTEX-NL3H-0011-R8a-SM-DIPDY 60-69 years, male 181.4
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 181.3
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 174.9
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 174.3
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 165.8
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 162.4
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 158.3
GTEX-RU72-0011-R8A-SM-2TF61 50-59 years, female 158.1
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 155.7
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 154.4
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 153.0
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 152.8
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 148.8
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 148.6
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 146.7
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 145.6
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 145.6
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 140.6
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 140.5
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 139.3
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 138.7
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 137.9
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 137.9
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 136.7
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 135.8
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 134.5
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 133.6
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 131.3
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 129.9
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 129.5
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 128.9
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 128.7
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 125.4
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 125.2
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 125.2
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 123.8
GTEX-13IVO-0011-R8a-SM-5L3DY 70-79 years, male 123.1
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 122.0
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 121.0
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 120.9
GTEX-13NZ8-0011-R8b-SM-5KM48 60-69 years, female 120.8
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 120.5
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 117.9
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 116.1
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 115.7
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 114.3
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 113.8
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 112.2
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 111.5
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 110.9
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 110.2
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 109.9
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 109.7
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 108.7
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 106.8
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 106.5
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 106.0
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 105.6
GTEX-Q2AG-0011-R8A-SM-2HMK5 40-49 years, female 104.8
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 104.4
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 104.0
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 103.6
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 101.2
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 100.8
GTEX-18464-0011-R8a-SM-72D4Z 50-59 years, male 100.1
GTEX-XLM4-0011-R8A-SM-4AT44 60-69 years, male 100.1
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 99.9
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 99.6
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 99.5
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 99.2
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 98.8
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 97.5
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 96.2
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 96.0
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 94.8
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 94.7
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 94.6
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 94.4
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 93.6
GTEX-TSE9-0011-R8A-SM-3DB7R 60-69 years, female 91.6
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 91.5
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 90.8
GTEX-145MI-0011-R8b-SM-5PNZ9 60-69 years, female 89.8
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 89.6
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 89.0
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 88.1
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 87.9
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 87.9
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 85.9
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 85.5
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 85.3
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 84.3
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 83.6
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 82.8
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 82.1
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 81.7
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 80.9
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 80.6
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 79.3
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 79.1
GTEX-N7MT-0011-R8a-SM-2I5GU 60-69 years, female 78.2
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 77.9
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 77.5
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 76.9
GTEX-S7SE-0011-R8A-SM-2XCDG 50-59 years, male 76.2
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 76.2
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 74.7
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 74.4
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 73.2
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 72.8
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 72.0
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 71.8
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 70.8
GTEX-R55E-0011-R8A-SM-2TC66 20-29 years, male 70.1
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 69.5
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 69.1
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 68.6
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 68.3
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 66.2
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 65.5
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 65.3
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 65.0
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 65.0
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 64.8
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 64.3
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 64.0
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 63.9
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 63.0
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 62.6
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 62.6
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 62.4
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 61.9
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 61.9
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 59.9
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 59.2
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 58.4
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 57.1
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 56.6
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 55.6
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 53.3
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 52.0
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 51.0
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 50.6
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 48.8
GTEX-NPJ7-0011-R8a-SM-2I3G2 60-69 years, female 48.7
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 47.9
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 46.3
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 45.9
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 45.4
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 44.9
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 44.4
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 43.4
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 41.2
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 40.9
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 40.7
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 39.4
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 38.6
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 37.8
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 36.1
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 36.0
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 35.9
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 34.9
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 34.8
GTEX-183WM-0011-R8a-SM-7189W 70-79 years, female 34.6
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 33.9
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 32.9
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 32.1
GTEX-OHPN-0011-R8A-SM-33HBT 60-69 years, female 31.3
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 28.2
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 25.2
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 20.7
GTEX-X4EP-0011-R8B-SM-4QASL 60-69 years, female 19.5
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 17.9
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

602.2
Pig sample Sample description nTPM
Hypothalamus
nTPM: 602.2
Samples: 4

Max nTPM: 632.4
Min nTPM: 572.0
Sample A Female 572.0
Sample B Female 632.4
Sample C Male 624.7
Sample D Male 579.6

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

117.2
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 117.2
Samples: 4

Max nTPM: 130.2
Min nTPM: 103.1
Sample A Male 103.1
Sample B Male 129.0
Sample C Female 106.6
Sample D Female 130.2

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

3.2
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 3.2
77454660 Antisense, RP_070129_01_C02, Mouse strain C57BL/6J (56 days, male) 3.9
79556722 Antisense, RP_071204_01_E02, Mouse strain C57BL/6J (56 days, male) 3.4
108 Antisense, RP_040324_01_F07, Mouse strain C57BL/6J (56 days, male) 2.4
109 Antisense, RP_040324_01_F07, Mouse strain C57BL/6J (56 days, male) 1.2

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