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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
PRIMARY MOUSE DATA
ANTIBODIES
AND
VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:247.1 nTPM
HPA Brain:178.3 nTPM
GTEx:247.1 nTPM
FANTOM5:866.2 Scaled Tags Per Million
Pig:248.8 nTPM
Mouse:329.7 nTPM
Allen mouse:7.8 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA011893Antibody HPA075062
Glial cells Not detectedNot detected
Neuronal cells Not detectedNot detected



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

178.3
Sample id Sample description nTPM
Caudate nucleus
nTPM: 94.6
1857 Female, age 85, left hemisphere 188.5
1854 Male, age 80, left hemisphere 127.8
1781 Male, age 74, unknown 110.0
2846 Female, age 79, unknown 102.8
2290 Female, age 72, unknown 99.2
2288 Male, age 75, left hemisphere 46.6
2289 Male, age 61, right hemisphere 42.7
2481 Female, age 94, left hemisphere 39.4
Globus pallidus, externus
nTPM: 14.5
2395 Male, age 75, both hemispheres 23.9
2772 Female, age 79, unknown 19.8
1996 Male, age 80, right hemisphere 12.9
2646 Male, age 61, right hemisphere 11.2
2567 Female, age 72, unknown 4.6
Globus pallidus, internus
nTPM: 14.0
1818 Male, age 74, unknown 19.5
2287 Male, age 75, right hemisphere 19.0
2566 Female, age 72, unknown 16.5
2483 Female, age 94, right hemisphere 16.0
2037 Male, age 80, right hemisphere 12.7
2778 Female, age 91, both hemispheres 7.5
2111 Female, age 85, right hemisphere 6.6
Nucleus accumbens
nTPM: 178.3
1856 Female, age 91, right hemisphere 437.8
1806 Female, age 85, left hemisphere 219.9
2698 Female, age 72, unknown 186.0
1783 Male, age 74, unknown 180.6
2824 Male, age 61, right hemisphere 170.1
2732 Male, age 80, right hemisphere 121.2
2286 Male, age 75, left hemisphere 67.4
2391 Female, age 94, left hemisphere 43.4
Nucleus basalis of Meynert
nTPM: 51.1
2393 Male, age 80, right hemisphere 83.8
2821 Male, age 75, both hemispheres 75.5
2484 Female, age 94, left hemisphere 36.3
2569 Male, age 61, both hemispheres 8.7
Nucleus of the diagonal band
nTPM: 89.3
1812 Female, age 91, both hemispheres 142.3
1979 Male, age 74, unknown 96.5
2195 Female, age 85, both hemispheres 91.4
2775 Male, age 80, right hemisphere 69.5
2029 Male, age 61, right hemisphere 46.7
Putamen
nTPM: 90.1
1937 Female, age 91, right hemisphere 189.7
1838 Male, age 80, right hemisphere 185.8
2466 Female, age 79, unknown 85.2
1829 Male, age 74, unknown 81.1
2482 Female, age 94, left hemisphere 50.1
2489 Female, age 72, unknown 23.5
2647 Male, age 75, left hemisphere 15.1
Septal nuclei
nTPM: 85.6
2009 Female, age 91, both hemispheres 122.1
2629 Female, age 94, right hemisphere 120.5
2031 Female, age 72, unknown 93.7
1960 Male, age 74, unknown 85.9
2059 Female, age 85, both hemispheres 67.1
2394 Male, age 61, left hemisphere 62.9
2199 Male, age 80, right hemisphere 47.2
Stria terminalis, bed nucleus
nTPM: 116.6
2201 Male, age 74, unknown 187.8
2486 Female, age 94, both hemispheres 88.8
1974 Female, age 91, both hemispheres 73.2

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

247.1
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 109.6
Samples: 246

Max nTPM: 502.3
Min nTPM: 6.6
Std nTPM: 84.3
Median nTPM: 93.2
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 502.3
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 403.7
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 384.4
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 364.5
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 358.2
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 349.7
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 318.8
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 308.8
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 284.6
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 274.3
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 259.2
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 255.2
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 251.8
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 248.7
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 247.6
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 243.4
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 236.9
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 235.8
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 232.8
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 228.9
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 228.3
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 227.5
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 222.5
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 220.0
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 219.9
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 218.6
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 213.8
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 213.6
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 211.9
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 206.1
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 205.4
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 203.2
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 203.0
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 202.8
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 202.7
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 196.7
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 196.7
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 195.9
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 193.8
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 192.7
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 192.6
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 192.2
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 183.6
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 178.3
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 177.8
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 177.5
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 177.2
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 177.0
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 171.2
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 170.8
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 170.1
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 167.6
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 163.0
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 162.9
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 162.3
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 161.7
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 161.6
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 159.7
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 158.2
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 157.5
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 157.3
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 156.5
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 156.3
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 154.3
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 154.3
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 153.6
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 153.1
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 152.2
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 151.3
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 150.9
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 148.8
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 148.8
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 148.7
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 148.5
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 148.3
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 147.3
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 146.1
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 144.9
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 144.7
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 142.2
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 141.6
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 140.0
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 138.2
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 136.5
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 135.2
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 134.6
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 127.6
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 127.5
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 127.0
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 126.6
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 126.5
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 125.4
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 123.1
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 122.7
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 118.9
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 117.9
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 117.4
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 114.8
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 114.0
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 113.3
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 112.9
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 112.6
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 111.8
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 110.4
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 110.0
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 109.8
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 109.1
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 108.6
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 105.0
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 102.9
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 102.7
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 102.4
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 102.0
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 101.4
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 101.3
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 101.1
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 101.1
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 100.1
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 97.5
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 97.4
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 97.1
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 96.7
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 94.1
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 92.2
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 92.1
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 91.1
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 89.8
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 89.1
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 88.7
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 88.0
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 87.5
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 87.1
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 86.6
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 86.0
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 85.9
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 83.6
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 83.1
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 81.9
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 81.9
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 78.8
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 77.4
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 77.1
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 75.7
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 75.7
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 73.1
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 72.2
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 70.0
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 69.7
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 68.0
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 66.7
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 66.6
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 66.2
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 64.9
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 64.7
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 64.7
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 64.4
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 63.6
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 63.1
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 63.0
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 62.8
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 62.6
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 61.2
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 60.7
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 56.7
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 56.3
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 55.0
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 54.5
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 54.4
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 53.7
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 51.8
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 51.5
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 50.7
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 50.4
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 49.8
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 49.5
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 49.4
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 49.1
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 47.4
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 47.0
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 46.5
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 44.8
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 42.7
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 41.1
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 40.4
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 40.3
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 39.5
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 39.3
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 38.5
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 37.9
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 36.6
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 35.5
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 35.2
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 35.2
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 34.2
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 34.0
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 33.2
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 31.2
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 30.9
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 30.7
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 29.6
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 28.8
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 28.6
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 27.0
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 26.8
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 26.2
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 25.7
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 25.0
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 24.3
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 23.8
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 23.1
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 22.4
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 22.3
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 21.3
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 21.0
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 20.8
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 20.5
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 20.4
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 20.4
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 20.3
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 18.8
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 18.7
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 18.5
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 18.5
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 17.9
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 17.4
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 17.3
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 17.2
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 17.1
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 16.2
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 15.8
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 15.5
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 15.4
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 12.9
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 12.1
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 11.9
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 11.6
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 11.3
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 11.1
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 10.0
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 9.9
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 9.0
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 8.9
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 8.6
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 8.3
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 6.7
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 6.6
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 247.1
Samples: 246

Max nTPM: 874.2
Min nTPM: 5.2
Std nTPM: 157.5
Median nTPM: 249.4
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 874.2
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 703.7
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 678.1
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 612.0
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 594.8
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 582.0
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 565.0
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 554.8
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 550.8
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 543.5
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 532.0
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 514.4
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 505.1
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 501.7
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 499.8
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 499.6
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 491.7
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 486.2
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 475.9
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 466.8
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 460.3
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 458.4
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 458.1
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 451.6
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 446.8
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 445.3
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 441.9
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 438.4
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 436.2
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 435.3
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 434.4
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 432.1
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 428.5
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 414.9
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 412.4
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 411.5
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 405.2
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 396.1
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 396.0
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 391.3
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 388.6
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 388.5
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 387.2
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 387.1
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 379.5
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 378.9
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 378.5
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 375.7
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 374.0
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 368.8
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 364.0
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 362.5
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 360.9
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 358.4
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 357.1
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 356.7
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 355.5
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 355.1
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 352.9
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 351.2
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 349.5
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 349.1
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 348.3
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 346.7
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 345.5
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 342.3
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 342.2
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 341.2
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 339.3
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 337.9
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 334.5
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 332.8
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 327.3
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 325.9
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 324.7
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 321.7
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 321.2
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 319.7
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 318.2
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 318.1
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 317.4
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 316.8
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 316.4
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 313.5
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 309.7
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 308.0
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 305.6
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 303.0
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 302.7
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 301.7
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 298.0
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 297.9
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 293.2
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 292.2
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 289.6
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 288.5
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 288.4
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 282.6
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 281.9
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 279.2
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 278.6
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 278.4
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 278.3
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 276.9
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 275.6
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 273.2
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 272.8
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 271.0
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 270.4
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 269.8
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 267.4
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 266.4
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 263.0
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 262.7
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 262.0
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 261.4
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 260.1
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 259.8
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 259.6
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 258.8
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 255.6
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 255.0
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 251.2
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 247.5
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 247.1
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 246.6
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 243.0
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 241.3
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 240.5
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 237.5
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 236.1
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 234.4
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 232.2
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 231.7
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 231.4
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 228.8
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 228.2
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 226.3
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 226.0
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 224.9
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 224.5
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 224.1
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 224.1
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 223.3
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 217.1
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 215.6
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 213.2
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 210.8
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 207.6
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 207.4
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 205.9
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 200.1
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 199.0
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 191.1
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 190.0
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 188.0
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 183.6
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 181.9
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 179.9
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 179.6
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 178.4
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 174.1
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 171.3
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 169.6
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 169.2
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 166.3
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 156.2
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 154.1
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 153.5
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 153.3
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 150.6
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 149.9
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 148.9
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 148.5
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 147.9
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 147.1
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 139.6
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 136.1
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 130.5
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 129.8
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 129.1
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 126.3
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 125.2
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 124.5
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 117.8
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 117.4
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 113.6
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 113.5
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 107.8
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 106.3
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 99.0
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 93.0
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 92.1
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 90.1
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 87.6
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 83.3
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 83.2
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 77.5
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 74.7
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 70.1
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 69.2
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 69.2
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 68.1
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 67.7
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 56.7
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 56.2
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 53.6
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 51.4
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 51.2
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 50.8
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 46.5
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 44.8
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 43.0
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 41.9
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 41.8
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 40.3
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 39.2
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 38.2
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 37.2
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 37.2
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 34.4
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 33.8
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 33.5
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 32.7
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 32.7
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 30.8
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 28.7
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 27.9
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 26.8
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 26.5
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 25.3
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 24.9
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 23.8
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 23.5
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 22.5
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 21.7
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 19.9
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 18.1
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 17.6
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 14.3
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 14.1
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 13.7
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 12.1
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 11.7
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 8.9
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 5.2
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Brain - Putamen (basal ganglia)
Average nTPM: 100.4
Samples: 205

Max nTPM: 372.6
Min nTPM: 2.8
Std nTPM: 78.2
Median nTPM: 84.0
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 372.6
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 342.8
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 314.4
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 312.6
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 291.1
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 282.9
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 277.5
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 273.5
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 262.9
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 255.0
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 254.1
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 247.1
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 245.7
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 244.1
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 244.0
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 235.7
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 232.4
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 230.5
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 226.4
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 221.8
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 215.5
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 214.0
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 212.4
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 211.1
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 206.4
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 189.3
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 189.2
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 187.4
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 185.6
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 183.9
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 179.2
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 178.9
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 177.2
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 174.6
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 171.0
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 171.0
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 170.3
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 166.6
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 166.2
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 165.9
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 165.6
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 165.4
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 162.4
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 161.9
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 161.3
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 156.3
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 154.8
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 154.0
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 148.0
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 146.7
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 146.4
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 144.7
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 144.3
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 143.9
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 140.7
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 140.1
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 138.6
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 136.9
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 135.2
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 133.5
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 132.5
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 130.0
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 129.9
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 128.6
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 125.9
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 124.6
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 124.3
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 123.3
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 123.2
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 122.6
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 122.5
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 116.9
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 115.8
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 114.2
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 113.2
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 112.2
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 110.1
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 109.7
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 107.7
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 106.0
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 105.0
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 104.6
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 103.9
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 103.6
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 102.9
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 102.2
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 102.1
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 100.1
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 99.3
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 98.5
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 97.2
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 97.1
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 96.8
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 94.0
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 90.9
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 90.1
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 89.6
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 88.4
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 88.3
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 87.7
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 87.0
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 84.5
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 84.0
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 83.2
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 82.6
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 82.3
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 80.4
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 79.7
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 78.8
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 77.6
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 77.4
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 77.1
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 76.4
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 75.8
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 75.0
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 74.4
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 73.5
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 71.8
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 71.7
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 71.6
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 71.5
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 71.4
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 69.9
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 66.9
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 66.6
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 66.6
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 62.2
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 62.1
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 61.3
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 57.4
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 52.5
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 51.7
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 49.8
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 48.9
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 47.1
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 46.3
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 46.3
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 45.5
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 45.0
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 44.0
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 43.8
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 42.6
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 42.6
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 41.6
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 41.2
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 40.4
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 40.4
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 39.2
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 38.7
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 38.7
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 38.3
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 37.6
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 37.0
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 36.9
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 34.6
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 33.5
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 29.6
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 29.3
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 29.2
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 27.4
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 27.2
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 26.8
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 26.5
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 26.0
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 25.4
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 25.0
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 24.9
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 24.2
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 23.9
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 23.9
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 23.7
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 23.5
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 22.4
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 21.5
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 21.5
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 21.4
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 20.9
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 20.9
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 20.5
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 20.4
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 18.3
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 18.0
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 16.9
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 16.6
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 15.4
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 15.2
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 14.9
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 12.4
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 11.6
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 11.3
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 10.9
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 10.6
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 10.4
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 10.3
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 10.2
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 10.1
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 9.8
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 9.8
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 9.7
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 8.8
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 7.7
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 6.7
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 6.6
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 4.9
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 2.8
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

866.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 496.9
FF:10164-103B2 76 years, female 496.9
Nucleus accumbens
Scaled Tags Per Million: 297.7
FF:10037-101F1 23-56 years, mixed 297.7
Putamen
Scaled Tags Per Million: 866.2
FF:10176-103C5 60 years, female 866.2
Globus pallidus
Scaled Tags Per Million: 58.1
FF:10175-103C4 60 years, female 91.8
FF:10161-103A8 76 years, female 24.4

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

248.8
Pig sample Sample description nTPM
Caudate
nTPM: 98.5
Samples: 4

Max nTPM: 109.2
Min nTPM: 87.7
Sample A Female 98.2
Sample B Female 87.7
Sample C Male 99.0
Sample D Male 109.2
Putamen
nTPM: 104.6
Samples: 4

Max nTPM: 153.4
Min nTPM: 59.3
Sample A Female 123.6
Sample B Female 59.3
Sample C Male 153.4
Sample D Male 82.2
Septum
nTPM: 248.8
Samples: 4

Max nTPM: 666.2
Min nTPM: 42.7
Sample A Female 161.5
Sample B Female 124.8
Sample C Male 666.2
Sample D Male 42.7
Ventral pallidum
nTPM: 164.2
Samples: 4

Max nTPM: 359.6
Min nTPM: 42.2
Sample A Female 169.4
Sample B Female 42.2
Sample C Male 359.6
Sample D Male 85.7

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

329.7
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 281.1
Samples: 4

Max nTPM: 295.6
Min nTPM: 259.2
Sample A Male 259.2
Sample B Male 282.2
Sample C Female 295.6
Sample D Female 287.3
Septum
nTPM: 317.9
Samples: 4

Max nTPM: 449.6
Min nTPM: 239.0
Sample A Male 449.6
Sample B Male 239.0
Sample C Female 281.6
Sample D Female 301.5
Ventral forebrain
nTPM: 329.7
Samples: 4

Max nTPM: 365.1
Min nTPM: 288.5
Sample A Male 306.4
Sample B Male 365.1
Sample C Female 288.5
Sample D Female 358.8

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

7.8
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 5.7
934 Antisense, RP_Baylor_103021, Mouse strain C57BL/6J (56 days, male) 5.7
935 Antisense, RP_Baylor_103021, Mouse strain C57BL/6J (56 days, male) 4.5
Pallidum
Expression energy: 7.8
934 Antisense, RP_Baylor_103021, Mouse strain C57BL/6J (56 days, male) 7.8
935 Antisense, RP_Baylor_103021, Mouse strain C57BL/6J (56 days, male) 6.1

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