PONS AND MEDULLA - Expression summary
Mouse brain, Intensity
Medulla oblongatai 		164.489
Mouse brain, Intensity
Ponsi 		119.854
RNA expressioni
HPA Brain:552.9 nTPM
FANTOM5:392.6 Scaled Tags Per Million
Pig:303.2 nTPM
Mouse:338.0 nTPM
Allen mouse:5.3 Expression energy

MEDULLA OBLONGATA - Mouse brain profilei , antibody HPA075062
Medulla oblongata mean intensity 164.489
intensityi
FRONT BACK
Nucleus of the solitary tract 9.888
Raphe magnus nucleus 10.814
Cochlear nucleus 1.470
Lateral paragigantocellular nucleus 18.529
Raphe pallidus nucleus 6.940
Facial nucleus 1.261
Hypoglossal nucleus 16.887
Ambiguus nucleus 36.808
External cuneate nucleus 25.827
Inferior olivary nucleus 30.999
Raphe obscures nucleus 16.302
Dorsal motor nucleus of vagus 164.489
Barrington's nucleus -
Koelliker-fuse nucleus -
Motor tregiminal nucleus 1.685
Parabrachial nucleus 79.277
Principle sensory trigeminal nucleus 0.596
Locus coeruleus 119.854
Pontine nucleus 0.258
Vestibular nucleus 2.839
Pontine reticular nucleus, oral 0.267
Lateral lemniscus 0.811
Superior paraolivary nucleus 1.840

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 552.9
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 46.3
2090 Male, age 80, both hemispheres 52.2
2301 Female, age 85, both hemispheres 51.9
2188 Female, age 91, both hemispheres 48.0
1984 Male, age 76, both hemispheres 33.2
Area postrema
nTPM: 127.2
2054 Male, age 76, both hemispheres 334.5
2799 Male, age 61, both hemispheres 31.9
2306 Male, age 80, both hemispheres 15.2
Dorsal cochlear nucleus
nTPM: 96.9
2187 Female, age 91, both hemispheres 248.3
2058 Male, age 76, both hemispheres 129.3
2370 Male, age 61, both hemispheres 68.1
2378 Male, age 80, both hemispheres 24.3
2802 Male, age 74, right hemisphere 14.6
Dorsal medullary reticular nucleus
nTPM: 166.7
2040 Female, age 85, both hemispheres 250.1
2088 Male, age 76, both hemispheres 165.6
2373 Male, age 61, both hemispheres 84.3
Dorsal motor vagal complex
nTPM: 250.4
2133 Female, age 91, both hemispheres 714.9
2844 Male, age 55, unknown 335.2
2813 Female, age 72, unknown 307.0
2807 Female, age 85, both hemispheres 216.5
2000 Male, age 74, unknown 161.8
2185 Male, age 76, both hemispheres 102.6
2797 Male, age 61, both hemispheres 89.2
2643 Male, age 74, both hemispheres 75.7
Dorsal tegmental nucleus
nTPM: 109.1
2083 Male, age 80, both hemispheres 166.1
2358 Male, age 61, both hemispheres 108.8
2326 Male, age 74, both hemispheres 85.3
1936 Male, age 76, left hemisphere 76.0
Dorsolateral tegmental area
nTPM: 131.1
2751 Female, age 85, both hemispheres 182.8
2654 Male, age 80, both hemispheres 156.5
2141 Male, age 76, both hemispheres 144.6
2360 Male, age 74, both hemispheres 124.5
2337 Male, age 61, both hemispheres 46.8
Gigantocellular reticular nuclei, medullary
nTPM: 77.9
1876 Female, age 85, both hemispheres 117.4
2310 Male, age 80, both hemispheres 91.8
2022 Male, age 76, right hemisphere 82.3
2462 Male, age 74, both hemispheres 72.5
2387 Female, age 91, both hemispheres 53.0
2314 Male, age 61, both hemispheres 50.5
Gigantocellular reticular nuclei, pars
nTPM: 74.6
2084 Female, age 85, both hemispheres 156.7
2336 Male, age 61, both hemispheres 120.0
2168 Male, age 76, both hemispheres 45.4
2706 Male, age 80, both hemispheres 26.7
2330 Male, age 80, both hemispheres 24.2
Inferior olive
nTPM: 27.1
2085 Female, age 85, both hemispheres 44.8
2178 Male, age 61, both hemispheres 31.7
2379 Male, age 80, both hemispheres 23.4
2628 Female, age 91, both hemispheres 19.1
2563 Male, age 74, both hemispheres 16.5
Kolliker-Fuse nucleus
nTPM: 68.2
2163 Male, age 80, both hemispheres 104.5
2315 Male, age 76, right hemisphere 74.0
2793 Female, age 91, left hemisphere 26.0
Lateral lemniscal nuclei
nTPM: 38.1
2453 Male, age 74, right hemisphere 48.6
2169 Male, age 76, both hemispheres 41.2
2746 Female, age 85, left hemisphere 40.5
2036 Male, age 80, both hemispheres 39.0
2320 Female, age 91, left hemisphere 21.2
Lateral medullary reticular nucleus
nTPM: 83.2
2190 Female, age 85, both hemispheres 162.1
2044 Male, age 76, both hemispheres 126.6
2305 Male, age 74, both hemispheres 63.3
2852 Male, age 80, both hemispheres 55.6
2804 Female, age 91, both hemispheres 47.4
2374 Male, age 61, both hemispheres 44.2
Lateral parabrachial nucleus
nTPM: 78.4
2790 Male, age 61, both hemispheres 127.1
2013 Male, age 80, both hemispheres 96.8
2139 Female, age 85, right hemisphere 55.4
2792 Male, age 76, both hemispheres 34.3
Lateral vestibular nucleus
nTPM: 74.2
2184 Male, age 76, both hemispheres 76.9
2311 Male, age 80, both hemispheres 71.5
Locus coeruleus
nTPM: 552.9
2123 Female, age 91, both hemispheres 1180.5
2720 Male, age 74, both hemispheres 844.0
2788 Male, age 74, unknown 470.2
1980 Male, age 76, both hemispheres 430.0
2162 Male, age 80, both hemispheres 409.3
2014 Male, age 55, unknown 331.6
2317 Female, age 72, unknown 204.6
Medial olivary nucleus
nTPM: 54.9
2851 Male, age 80, both hemispheres 84.4
1943 Male, age 61, both hemispheres 64.9
1962 Male, age 76, both hemispheres 60.4
2138 Female, age 91, both hemispheres 9.8
Medial parabrachial nucleus
nTPM: 158.9
2170 Female, age 91, both hemispheres 338.2
2786 Male, age 76, both hemispheres 128.3
2854 Male, age 80, both hemispheres 118.5
2463 Female, age 85, right hemisphere 106.2
2156 Male, age 61, both hemispheres 103.5
Medial periolivary nuclei
nTPM: 43.4
2791 Male, age 74, right hemisphere 66.2
2171 Female, age 85, both hemispheres 50.1
2063 Male, age 76, both hemispheres 47.1
2458 Female, age 91, both hemispheres 27.9
2081 Male, age 80, both hemispheres 25.7
Medial vestibular nucleus
nTPM: 115.6
2134 Male, age 76, both hemispheres 220.6
2743 Female, age 85, both hemispheres 140.1
2801 Male, age 74, both hemispheres 133.2
2803 Female, age 91, both hemispheres 79.4
2093 Male, age 80, both hemispheres 62.0
2624 Male, age 61, both hemispheres 58.6
Motor facial nucleus
nTPM: 63.4
2126 Male, age 61, both hemispheres 137.3
2365 Male, age 74, right hemisphere 61.2
2697 Female, age 85, both hemispheres 56.2
2062 Male, age 76, both hemispheres 49.9
2327 Male, age 80, both hemispheres 47.6
2795 Female, age 91, both hemispheres 28.1
Motor hypoglossal nucleus
nTPM: 258.1
2461 Male, age 61, both hemispheres 468.2
2277 Male, age 76, both hemispheres 310.4
2132 Female, age 85, both hemispheres 212.9
2182 Male, age 80, both hemispheres 191.1
2125 Female, age 91, both hemispheres 107.9
Motor trigeminal nucleus
nTPM: 63.6
2335 Male, age 61, both hemispheres 118.1
2309 Male, age 76, both hemispheres 79.8
2321 Female, age 91, both hemispheres 57.8
2079 Male, age 80, both hemispheres 35.4
2560 Male, age 74, both hemispheres 26.8
Nuclei of the trapezoid body
nTPM: 48.3
2159 Male, age 61, both hemispheres 85.0
2735 Female, age 85, both hemispheres 58.2
1983 Male, age 76, both hemispheres 40.1
2166 Male, age 80, both hemispheres 37.8
2368 Female, age 91, both hemispheres 20.6
Nucleus ambiguus
nTPM: 97.1
2096 Female, age 85, both hemispheres 153.9
2071 Male, age 76, both hemispheres 40.3
Nucleus cuneatus
nTPM: 72.5
2562 Male, age 61, both hemispheres 232.7
2131 Male, age 76, both hemispheres 97.8
2381 Male, age 80, both hemispheres 70.4
2808 Female, age 85, both hemispheres 66.8
2376 Male, age 61, both hemispheres 64.6
2564 Male, age 74, both hemispheres 36.8
2100 Male, age 76, both hemispheres 32.1
2805 Female, age 91, both hemispheres 29.5
2380 Male, age 80, both hemispheres 21.8
Nucleus gracilis
nTPM: 46.0
2627 Male, age 74, both hemispheres 63.5
2382 Male, age 80, both hemispheres 39.4
2299 Female, age 85, both hemispheres 35.0
Nucleus raphe magnus
nTPM: 69.5
2160 Male, age 61, both hemispheres 143.1
2455 Male, age 74, both hemispheres 92.8
2172 Female, age 85, both hemispheres 71.5
2328 Male, age 80, both hemispheres 42.3
2051 Male, age 76, both hemispheres 36.9
2459 Female, age 91, both hemispheres 30.6
Nucleus raphe obscurus
nTPM: 83.6
2800 Male, age 61, midline 110.3
2845 Female, age 85, midline 104.5
2142 Male, age 76, midline 36.0
Nucleus raphe pallidus
nTPM: 185.6
2183 Male, age 80, midline 301.9
1924 Male, age 61, midline 218.3
2145 Male, age 76, midline 36.6
Nucleus tractus solitarii
nTPM: 268.5
2656 Male, age 76, both hemispheres 422.1
2307 Male, age 80, both hemispheres 382.6
2191 Female, age 85, both hemispheres 195.0
2144 Female, age 91, right hemisphere 74.3
Paramedian reticular nucleus
nTPM: 196.0
2313 Male, age 61, both hemispheres 300.9
2057 Male, age 80, both hemispheres 192.9
2050 Female, age 85, both hemispheres 160.3
2052 Male, age 76, both hemispheres 129.9
Parvicellular reticular nuclei
nTPM: 92.5
2119 Male, age 80, both hemispheres 200.3
2095 Male, age 76, both hemispheres 49.2
2558 Male, age 74, both hemispheres 28.1
Parvicellular reticular nuclei, medullary
nTPM: 223.2
2189 Female, age 91, both hemispheres 301.9
2091 Female, age 85, both hemispheres 225.6
2181 Male, age 80, left hemisphere 141.9
Pedunculopontine tegmental nucleus
nTPM: 206.0
2334 Male, age 80, both hemispheres 345.0
1921 Female, age 85, both hemispheres 166.0
2338 Male, age 61, both hemispheres 106.8
Peritrigeminal nucleus
nTPM: 157.5
2067 Female, age 85, both hemispheres 212.9
2179 Male, age 61, both hemispheres 199.2
2136 Male, age 76, both hemispheres 60.3
Pontine nuclei
nTPM: 56.5
2727 Male, age 61, right hemisphere 118.4
1863 Male, age 55, unknown 74.7
2109 Female, age 72, unknown 67.3
2454 Male, age 74, left hemisphere 56.8
2787 Female, age 85, both hemispheres 56.1
1968 Male, age 76, left hemisphere 31.2
2115 Male, age 80, left hemisphere 27.0
2319 Female, age 91, both hemispheres 20.7
Pontine raphe nucleus
nTPM: 202.7
2853 Male, age 76, midline 248.8
2122 Female, age 85, midline 156.6
Posteroventral cochlear nucleus
nTPM: 104.3
2070 Male, age 76, both hemispheres 266.4
2752 Female, age 85, both hemispheres 180.9
2371 Male, age 61, both hemispheres 56.2
2341 Male, age 80, both hemispheres 11.9
2135 Female, age 91, both hemispheres 6.2
Prepositus hypoglossal nucleus
nTPM: 77.0
2855 Female, age 85, right hemisphere 93.7
2086 Male, age 80, both hemispheres 60.3
Principal sensory trigeminal nucleus
nTPM: 58.9
2158 Male, age 61, both hemispheres 100.6
2324 Male, age 76, both hemispheres 64.8
2008 Male, age 80, left hemisphere 47.5
2367 Female, age 91, left hemisphere 22.8
Reticular pontine nucleus, caudal
nTPM: 43.4
2559 Male, age 74, both hemispheres 51.0
2092 Male, age 76, both hemispheres 47.9
2332 Male, age 80, right hemisphere 42.7
2457 Female, age 91, both hemispheres 32.1
Reticular pontine nucleus, oral
nTPM: 108.8
1939 Male, age 80, both hemispheres 195.4
2012 Female, age 85, both hemispheres 113.1
2167 Male, age 76, both hemispheres 111.6
2361 Male, age 74, both hemispheres 104.3
2366 Female, age 91, both hemispheres 19.5
Reticulotegmental nucleus
nTPM: 87.4
2322 Female, age 91, both hemispheres 93.3
2325 Male, age 76, both hemispheres 91.3
2333 Male, age 80, both hemispheres 84.1
2452 Male, age 74, both hemispheres 80.9
Spinal trigeminal nucleus, caudal
nTPM: 141.8
2390 Female, age 91, both hemispheres 223.7
2642 Male, age 74, both hemispheres 142.4
2308 Male, age 80, both hemispheres 130.0
2447 Male, age 76, both hemispheres 116.8
2312 Male, age 61, both hemispheres 96.0
Spinal trigeminal nucleus, interpolar
nTPM: 187.2
2386 Female, age 85, both hemispheres 286.1
2033 Male, age 80, both hemispheres 245.6
2066 Male, age 76, right hemisphere 179.5
2625 Male, age 61, both hemispheres 119.0
2389 Female, age 91, both hemispheres 105.7
Spinal trigeminal nucleus, oral
nTPM: 119.4
2737 Female, age 85, both hemispheres 131.4
2164 Male, age 80, both hemispheres 127.7
1978 Male, age 76, both hemispheres 99.2
Spinal vestibular nucleus
nTPM: 115.0
2780 Male, age 80, both hemispheres 162.4
2186 Female, age 91, both hemispheres 149.9
2748 Male, age 76, both hemispheres 127.7
2806 Female, age 85, both hemispheres 100.1
2796 Male, age 61, both hemispheres 95.2
2384 Male, age 74, both hemispheres 54.8
Subcoeruleus area
nTPM: 233.0
2323 Female, age 91, left hemisphere 711.1
1958 Male, age 80, both hemispheres 164.8
2451 Male, age 74, both hemispheres 142.3
2369 Female, age 85, left hemisphere 109.4
2089 Male, age 76, left hemisphere 37.4
Superior olive
nTPM: 49.9
1875 Female, age 85, both hemispheres 80.5
2364 Male, age 74, right hemisphere 71.7
2329 Male, age 80, right hemisphere 35.4
2020 Male, age 76, both hemispheres 32.5
2561 Female, age 91, both hemispheres 29.1
Superior vestibular nucleus
nTPM: 112.3
2015 Male, age 80, both hemispheres 124.0
2061 Male, age 76, both hemispheres 118.9
2383 Male, age 74, both hemispheres 94.0
Ventral medullary reticular nucleus
nTPM: 130.4
2060 Male, age 76, both hemispheres 162.0
2372 Male, age 61, both hemispheres 98.9
Ventral periolivary nuclei
nTPM: 43.9
2130 Female, age 85, both hemispheres 57.4
2165 Male, age 80, both hemispheres 48.6
2023 Male, age 76, both hemispheres 34.9
2794 Female, age 91, left hemisphere 34.6
Ventrolateral medulla, A1-C1 cell groups
nTPM: 162.4
2180 Male, age 61, both hemispheres 302.4
2741 Female, age 85, both hemispheres 297.8
1986 Male, age 76, both hemispheres 124.5
2118 Male, age 80, both hemispheres 56.3
2302 Female, age 91, both hemispheres 30.9
Ventrolateral tegmental area, A5 NE cell group
nTPM: 76.0
2359 Male, age 61, both hemispheres 176.4
2840 Female, age 85, both hemispheres 112.8
2449 Male, age 74, both hemispheres 67.8
1959 Male, age 76, both hemispheres 41.9
2161 Male, age 80, both hemispheres 37.7
2456 Female, age 91, both hemispheres 19.5

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 392.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 392.6
FF:10165-103B3 76 years, female 556.2
FF:10182-103D2 60 years, female 229.0
Medulla oblongata
Scaled Tags Per Million: 165.3
FF:10038-101F2 18-64 years, mixed 218.6
FF:10155-103A2 76 years, female 159.5
FF:10174-103C3 60 years, female 117.8
Pons
Scaled Tags Per Million: 356.6
FF:10033-101E6 18-54 years, mixed 356.6

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 303.2
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 188.8
Samples: 4

Max nTPM: 256.1
Min nTPM: 142.3
Sample A Female 256.1
Sample B Female 157.8
Sample C Male 142.3
Sample D Male 199.1
Pons
nTPM: 303.2
Samples: 4

Max nTPM: 473.5
Min nTPM: 116.9
Sample A Female 116.9
Sample B Female 361.3
Sample C Male 473.5
Sample D Male 261.2

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 338.0
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 338.0
Samples: 4

Max nTPM: 354.4
Min nTPM: 317.0
Sample A Male 337.0
Sample B Male 354.4
Sample C Female 343.5
Sample D Female 317.0

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 5.3
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 5.2
935 Antisense, RP_Baylor_103021, Mouse strain C57BL/6J (56 days, male) 5.2
934 Antisense, RP_Baylor_103021, Mouse strain C57BL/6J (56 days, male) 4.5
Pons
Expression energy: 5.3
935 Antisense, RP_Baylor_103021, Mouse strain C57BL/6J (56 days, male) 5.3
934 Antisense, RP_Baylor_103021, Mouse strain C57BL/6J (56 days, male) 5.2

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