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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:77.2 nTPM
HPA Brain:189.8 nTPM
GTEx:77.2 nTPM
FANTOM5:55.8 Scaled Tags Per Million
Pig:157.4 nTPM
Mouse:69.2 nTPM
Allen mouse:11.0 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA034631Antibody HPA071347Antibody CAB033265Antibody CAB037325
Glial cells MediumNot detectedNot detectedNot detected
Neuronal cells Not detectedLowMediumNot detected









BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

189.8
Sample id Sample description nTPM
Caudate nucleus
nTPM: 176.8
2846 Female, age 79, unknown 239.8
2290 Female, age 72, unknown 221.6
1857 Female, age 85, left hemisphere 204.3
1781 Male, age 74, unknown 180.9
1854 Male, age 80, left hemisphere 158.1
2289 Male, age 61, right hemisphere 154.9
2288 Male, age 75, left hemisphere 152.5
2481 Female, age 94, left hemisphere 102.1
Globus pallidus, externus
nTPM: 64.9
2772 Female, age 79, unknown 78.2
2395 Male, age 75, both hemispheres 70.1
2646 Male, age 61, right hemisphere 67.4
2567 Female, age 72, unknown 59.9
1996 Male, age 80, right hemisphere 49.0
Globus pallidus, internus
nTPM: 54.1
2483 Female, age 94, right hemisphere 90.2
2287 Male, age 75, right hemisphere 76.0
1818 Male, age 74, unknown 64.3
2566 Female, age 72, unknown 49.7
2037 Male, age 80, right hemisphere 44.1
2778 Female, age 91, both hemispheres 27.6
2111 Female, age 85, right hemisphere 26.9
Nucleus accumbens
nTPM: 144.4
1856 Female, age 91, right hemisphere 217.1
1783 Male, age 74, unknown 205.2
1806 Female, age 85, left hemisphere 179.4
2824 Male, age 61, right hemisphere 148.8
2698 Female, age 72, unknown 141.8
2286 Male, age 75, left hemisphere 130.8
2391 Female, age 94, left hemisphere 69.5
2732 Male, age 80, right hemisphere 62.6
Nucleus basalis of Meynert
nTPM: 146.8
2821 Male, age 75, both hemispheres 171.2
2484 Female, age 94, left hemisphere 161.7
2393 Male, age 80, right hemisphere 158.6
2569 Male, age 61, both hemispheres 95.8
Nucleus of the diagonal band
nTPM: 186.7
1812 Female, age 91, both hemispheres 247.3
2195 Female, age 85, both hemispheres 201.8
2029 Male, age 61, right hemisphere 198.9
2775 Male, age 80, right hemisphere 198.6
1979 Male, age 74, unknown 86.6
Putamen
nTPM: 189.8
1829 Male, age 74, unknown 214.1
2466 Female, age 79, unknown 211.5
2489 Female, age 72, unknown 207.4
2647 Male, age 75, left hemisphere 204.9
1838 Male, age 80, right hemisphere 188.6
1937 Female, age 91, right hemisphere 179.5
2482 Female, age 94, left hemisphere 122.7
Septal nuclei
nTPM: 152.7
1960 Male, age 74, unknown 220.0
2031 Female, age 72, unknown 187.8
2009 Female, age 91, both hemispheres 184.2
2629 Female, age 94, right hemisphere 176.9
2059 Female, age 85, both hemispheres 158.7
2394 Male, age 61, left hemisphere 77.9
2199 Male, age 80, right hemisphere 63.2
Stria terminalis, bed nucleus
nTPM: 142.8
1974 Female, age 91, both hemispheres 175.5
2486 Female, age 94, both hemispheres 164.9
2201 Male, age 74, unknown 88.0

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

77.2
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 69.4
Samples: 246

Max nTPM: 186.4
Min nTPM: 6.1
Std nTPM: 34.3
Median nTPM: 67.5
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 186.4
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 168.5
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 145.6
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 143.2
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 141.6
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 136.3
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 132.2
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 131.5
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 130.6
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 130.1
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 129.7
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 128.6
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 128.1
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 127.4
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 125.7
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 125.2
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 124.8
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 123.3
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 123.2
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 122.1
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 121.5
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 121.4
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 121.1
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 120.4
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 119.4
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 118.9
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 118.0
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 115.9
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 114.7
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 114.4
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 112.4
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 112.2
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 111.6
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 111.5
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 111.3
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 109.6
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 109.1
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 106.3
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 106.3
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 104.9
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 104.6
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 101.9
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 101.9
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 101.4
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 101.4
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 100.9
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 100.7
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 100.4
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 100.0
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 99.9
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 99.5
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 99.1
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 98.5
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 98.2
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 97.9
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 97.9
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 97.4
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 97.3
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 96.5
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 96.4
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 95.2
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 93.4
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 92.9
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 92.5
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 91.4
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 90.9
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 90.7
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 89.8
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 89.2
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 89.2
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 89.1
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 88.9
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 88.5
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 88.2
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 87.9
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 87.5
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 86.6
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 86.6
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 85.3
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 84.7
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 84.4
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 84.3
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 83.9
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 83.7
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 82.4
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 82.3
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 81.4
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 80.6
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 79.9
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 78.7
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 78.7
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 78.2
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 77.7
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 77.6
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 77.5
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 77.4
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 77.3
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 77.3
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 76.0
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 75.4
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 75.3
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 75.2
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 75.0
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 74.7
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 74.0
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 74.0
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 73.5
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 72.7
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 72.1
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 71.5
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 71.5
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 71.4
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 71.0
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 70.7
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 70.3
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 70.0
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 69.9
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 69.7
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 69.3
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 69.2
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 69.0
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 68.3
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 67.8
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 67.2
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 67.0
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 66.0
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 65.9
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 65.4
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 64.5
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 64.3
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 63.7
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 63.7
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 63.6
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 63.4
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 63.1
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 62.6
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 62.4
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 62.0
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 61.5
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 61.2
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 60.5
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 60.3
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 60.1
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 60.0
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 59.7
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 59.6
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 59.3
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 58.8
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 58.1
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 58.1
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 58.0
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 57.7
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 57.4
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 56.8
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 56.7
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 56.6
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 56.3
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 56.1
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 55.9
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 55.6
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 50.8
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 50.6
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 50.4
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 50.1
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 49.9
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 49.7
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 49.6
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 49.0
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 49.0
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 48.8
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 48.6
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 46.9
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 46.9
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 46.4
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 46.1
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 45.8
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 45.6
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 44.9
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 44.2
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 43.3
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 43.0
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 42.3
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 41.0
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 40.9
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 37.7
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 37.6
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 37.1
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 37.0
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 36.9
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 36.8
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 36.6
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 36.0
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 35.8
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 34.9
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 34.7
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 34.5
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 34.3
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 33.6
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 33.4
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 33.3
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 33.1
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 32.6
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 32.5
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 31.7
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 30.5
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 30.3
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 30.3
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 29.9
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 29.8
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 29.5
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 29.2
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 28.8
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 28.4
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 28.1
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 27.9
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 27.6
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 27.4
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 26.8
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 26.6
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 26.0
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 25.6
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 24.7
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 24.4
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 24.4
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 24.3
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 24.3
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 23.5
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 23.5
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 23.0
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 22.8
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 22.8
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 22.1
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 21.8
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 21.8
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 21.2
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 21.2
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 20.7
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 20.6
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 19.0
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 18.1
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 17.2
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 16.7
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 15.9
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 14.9
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 11.8
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 6.1
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 77.2
Samples: 246

Max nTPM: 170.1
Min nTPM: 8.0
Std nTPM: 34.1
Median nTPM: 82.5
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 170.1
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 155.3
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 152.3
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 148.7
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 145.9
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 144.4
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 142.4
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 141.5
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 138.6
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 137.8
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 135.8
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 133.5
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 130.8
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 130.1
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 130.1
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 128.1
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 127.7
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 127.0
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 122.1
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 120.7
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 119.9
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 117.2
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 116.7
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 116.6
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 116.5
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 115.9
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 114.1
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 113.9
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 113.9
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 113.2
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 112.9
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 112.5
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 112.4
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 111.8
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 111.5
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 111.1
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 110.3
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 110.2
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 110.0
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 110.0
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 109.7
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 108.7
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 107.8
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 107.3
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 106.8
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 106.7
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 105.9
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 105.8
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 105.7
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 105.4
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 105.1
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 104.5
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 104.3
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 104.3
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 104.1
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 103.5
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 103.5
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 103.4
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 103.3
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 103.3
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 103.2
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 103.0
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 102.5
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 101.7
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 101.5
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 101.1
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 101.0
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 100.7
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 100.5
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 100.1
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 100.0
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 99.9
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 99.7
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 99.3
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 99.1
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 98.4
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 98.1
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 96.8
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 96.7
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 96.2
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 96.2
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 95.9
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 95.6
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 94.9
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 94.2
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 93.1
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 92.4
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 92.3
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 91.8
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 91.8
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 91.7
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 91.6
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 91.5
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 91.2
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 91.1
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 91.0
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 90.8
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 90.2
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 89.8
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 89.8
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 89.6
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 89.6
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 89.6
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 89.2
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 88.2
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 86.9
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 86.9
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 86.6
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 86.5
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 86.5
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 86.4
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 85.4
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 85.1
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 84.6
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 84.5
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 84.3
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 83.7
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 83.5
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 83.5
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 83.1
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 82.9
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 82.9
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 82.5
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 82.5
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 82.0
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 80.8
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 80.4
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 80.1
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 80.0
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 78.6
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 78.5
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 77.9
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 77.7
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 77.4
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 77.1
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 77.1
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 77.1
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 76.4
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 76.3
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 75.7
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 75.7
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 74.6
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 74.5
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 74.3
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 74.0
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 73.4
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 72.8
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 72.6
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 72.3
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 71.7
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 71.6
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 71.3
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 69.5
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 69.3
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 68.3
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 67.7
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 65.7
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 64.4
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 64.2
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 62.4
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 62.2
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 62.0
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 61.3
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 61.1
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 60.8
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 60.0
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 59.5
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 59.3
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 59.3
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 58.7
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 57.9
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 57.6
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 56.4
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 55.9
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 54.5
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 54.1
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 53.8
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 53.5
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 53.5
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 53.4
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 53.3
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 53.1
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 53.1
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 51.2
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 48.7
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 48.3
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 48.1
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 47.9
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 47.4
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 46.9
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 45.0
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 44.6
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 44.3
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 44.1
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 44.1
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 40.8
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 40.7
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 39.8
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 38.9
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 37.9
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 37.8
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 36.9
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 36.7
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 36.2
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 36.2
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 35.9
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 35.6
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 35.3
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 35.0
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 33.9
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 33.6
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 32.9
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 32.5
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 32.0
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 31.4
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 30.8
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 29.6
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 29.5
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 29.5
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 28.5
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 28.4
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 28.3
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 28.0
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 27.2
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 26.6
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 25.6
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 24.9
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 23.3
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 23.1
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 22.3
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 21.6
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 21.4
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 20.4
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 20.4
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 20.4
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 20.3
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 20.1
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 19.7
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 17.8
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 17.6
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 16.5
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 15.7
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 15.7
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 15.6
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 13.3
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 8.0
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Brain - Putamen (basal ganglia)
Average nTPM: 66.1
Samples: 205

Max nTPM: 159.1
Min nTPM: 8.6
Std nTPM: 34.1
Median nTPM: 64.6
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 159.1
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 156.1
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 147.1
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 144.7
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 138.3
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 136.5
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 130.2
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 126.7
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 126.4
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 125.4
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 123.0
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 121.1
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 119.0
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 117.1
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 117.0
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 116.8
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 113.4
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 112.1
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 111.1
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 111.0
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 110.8
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 110.1
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 108.3
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 107.5
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 105.7
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 105.5
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 104.2
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 104.0
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 103.5
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 102.9
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 102.4
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 101.9
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 101.5
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 101.2
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 100.9
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 100.8
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 100.2
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 99.9
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 98.6
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 97.7
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 97.7
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 97.5
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 97.2
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 97.1
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 96.3
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 96.2
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 95.1
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 94.3
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 93.8
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 91.8
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 91.4
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 90.7
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 90.6
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 90.4
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 90.2
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 89.6
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 89.3
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 87.6
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 87.6
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 87.3
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 87.0
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 87.0
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 86.9
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 85.8
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 85.7
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 85.4
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 84.7
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 84.2
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 83.8
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 83.7
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 83.6
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 82.4
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 82.2
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 82.1
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 81.8
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 81.7
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 80.8
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 80.4
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 80.0
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 79.9
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 79.5
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 79.1
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 77.6
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 76.1
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 75.7
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 73.4
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 72.0
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 71.9
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 70.3
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 70.1
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 69.6
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 69.3
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 68.3
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 67.5
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 66.7
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 66.5
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 66.1
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 65.9
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 65.8
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 65.5
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 65.0
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 64.7
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 64.6
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 64.3
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 63.5
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 63.4
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 62.9
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 61.3
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 60.7
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 60.2
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 59.7
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 59.2
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 59.1
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 57.9
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 57.3
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 57.3
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 57.1
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 57.0
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 55.6
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 55.5
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 54.9
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 54.4
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 53.4
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 52.3
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 52.3
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 51.9
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 51.7
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 51.7
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 51.4
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 51.4
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 51.1
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 50.9
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 49.6
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 49.3
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 48.9
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 48.9
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 47.9
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 47.6
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 47.0
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 47.0
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 45.6
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 45.5
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 45.3
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 45.2
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 43.7
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 43.7
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 43.6
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 43.2
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 42.7
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 41.9
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 41.7
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 40.8
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 40.2
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 38.5
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 37.4
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 35.3
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 33.4
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 32.9
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 32.8
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 32.2
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 32.0
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 31.4
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 30.7
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 30.3
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 29.4
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 29.0
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 28.5
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 28.2
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 28.0
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 27.0
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 26.9
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 26.7
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 26.0
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 25.2
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 25.2
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 25.1
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 24.6
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 24.1
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 23.6
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 23.6
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 21.8
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 21.5
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 21.4
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 21.0
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 20.6
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 20.2
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 19.8
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 19.1
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 18.9
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 18.9
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 18.3
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 18.3
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 18.0
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 17.9
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 17.6
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 16.8
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 16.0
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 16.0
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 15.7
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 14.6
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 14.6
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 12.4
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 9.2
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 9.1
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 8.6
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

55.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 45.1
FF:10164-103B2 76 years, female 45.1
Nucleus accumbens
Scaled Tags Per Million: 55.8
FF:10037-101F1 23-56 years, mixed 55.8
Putamen
Scaled Tags Per Million: 25.5
FF:10176-103C5 60 years, female 25.5
Globus pallidus
Scaled Tags Per Million: 7.2
FF:10161-103A8 76 years, female 8.2
FF:10175-103C4 60 years, female 6.2

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

157.4
Pig sample Sample description nTPM
Caudate
nTPM: 157.4
Samples: 4

Max nTPM: 220.0
Min nTPM: 97.8
Sample A Female 97.8
Sample B Female 160.0
Sample C Male 220.0
Sample D Male 151.6
Putamen
nTPM: 133.5
Samples: 4

Max nTPM: 187.0
Min nTPM: 40.9
Sample A Female 40.9
Sample B Female 137.3
Sample C Male 168.6
Sample D Male 187.0
Septum
nTPM: 51.9
Samples: 4

Max nTPM: 71.4
Min nTPM: 32.9
Sample A Female 69.7
Sample B Female 71.4
Sample C Male 33.7
Sample D Male 32.9
Ventral pallidum
nTPM: 88.4
Samples: 4

Max nTPM: 95.7
Min nTPM: 72.1
Sample A Female 95.7
Sample B Female 93.2
Sample C Male 72.1
Sample D Male 92.5

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

69.2
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 69.2
Samples: 4

Max nTPM: 74.9
Min nTPM: 63.0
Sample A Male 67.5
Sample B Male 74.9
Sample C Female 63.0
Sample D Female 71.4
Septum
nTPM: 24.3
Samples: 4

Max nTPM: 33.5
Min nTPM: 17.3
Sample A Male 33.5
Sample B Male 21.9
Sample C Female 24.6
Sample D Female 17.3
Ventral forebrain
nTPM: 57.0
Samples: 4

Max nTPM: 61.6
Min nTPM: 51.2
Sample A Male 56.6
Sample B Male 51.2
Sample C Female 61.6
Sample D Female 58.7

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

11.0
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 11.0
73573223 Antisense, RP_051121_03_E06, Mouse strain C57BL/6J (56 days, male) 11.0
74640881 Antisense, RP_051121_03_E06, Mouse strain C57BL/6J (56 days, male) 9.6
Pallidum
Expression energy: 3.9
73573223 Antisense, RP_051121_03_E06, Mouse strain C57BL/6J (56 days, male) 3.9
74640881 Antisense, RP_051121_03_E06, Mouse strain C57BL/6J (56 days, male) 2.1

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