HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:127.8 nTPM
HPA Brain:261.0 nTPM
GTEx:127.8 nTPM
FANTOM5:21.0 Scaled Tags Per Million
Pig:176.2 nTPM
Mouse:63.6 nTPM
Allen mouse:14.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA034631Antibody HPA071347Antibody CAB033265Antibody CAB037325
Glial cells MediumNot detectedNot detectedNot detected
Neuronal cells Not detectedLowLowNot detected









HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 261.0
Sample id Sample description nTPM
Hippocampus
nTPM: 255.5
2621 Female, age 67, right hemisphere 366.9
1911 Female, age 85, right hemisphere 278.4
2529 Female, age 94, left hemisphere 254.4
1855 Male, age 76, left hemisphere 217.8
2148 Female, age 91, left hemisphere 213.0
1898 Male, age 80, left hemisphere 202.7
Dentate gyrus
nTPM: 205.0
2531 Female, age 67, both hemispheres 294.8
1927 Female, age 91, both hemispheres 233.3
2246 Female, age 85, both hemispheres 189.9
2530 Female, age 94, left hemisphere 187.6
2528 Male, age 74, both hemispheres 164.8
2010 Male, age 76, both hemispheres 159.8
Entorhinal gyrus
nTPM: 197.5
2613 Female, age 94, left hemisphere 341.7
1938 Female, age 85, left hemisphere 208.6
2764 Male, age 80, right hemisphere 182.7
1787 Male, age 76, left hemisphere 165.5
2686 Male, age 75, right hemisphere 154.2
2117 Female, age 91, right hemisphere 132.2
Hippocampus, CA1
nTPM: 248.9
2749 Male, age 80, left hemisphere 335.3
2527 Male, age 74, both hemispheres 284.3
2082 Female, age 91, right hemisphere 218.8
1873 Female, age 85, both hemispheres 203.4
2045 Male, age 76, both hemispheres 202.6
Hippocampus, CA2
nTPM: 203.0
2113 Female, age 91, right hemisphere 265.0
1963 Male, age 80, left hemisphere 259.7
2249 Male, age 74, both hemispheres 185.7
2437 Female, age 94, left hemisphere 172.8
1940 Female, age 85, left hemisphere 167.5
1892 Male, age 76, both hemispheres 167.3
Hippocampus, CA3
nTPM: 261.0
2137 Male, age 80, left hemisphere 408.9
2861 Female, age 67, both hemispheres 348.6
2620 Female, age 94, left hemisphere 270.9
2436 Male, age 74, both hemispheres 205.0
1867 Male, age 76, both hemispheres 173.7
1891 Female, age 85, both hemispheres 159.2
Parahippocampal cortex
nTPM: 220.3
2245 Female, age 91, both hemispheres 390.6
2622 Female, age 67, right hemisphere 264.1
2250 Female, age 67, right hemisphere 216.9
2532 Female, age 72, left hemisphere 205.4
1850 Male, age 80, both hemispheres 204.0
2693 Female, age 94, both hemispheres 202.2
2018 Male, age 76, both hemispheres 192.8
1933 Female, age 85, both hemispheres 185.7
2692 Male, age 74, both hemispheres 178.8
1990 Female, age 91, right hemisphere 162.7
Perirhinal gyrus
nTPM: 224.6
1847 Female, age 91, left hemisphere 281.5
2521 Female, age 94, right hemisphere 251.6
1794 Male, age 80, right hemisphere 220.6
1841 Female, age 85, right hemisphere 212.0
2848 Male, age 76, right hemisphere 157.2
Subiculum
nTPM: 154.4
1901 Male, age 80, both hemispheres 188.8
2042 Male, age 76, both hemispheres 172.6
2729 Female, age 91, right hemisphere 151.3
2619 Male, age 74, both hemispheres 145.9
1977 Female, age 85, both hemispheres 144.1
2438 Female, age 94, left hemisphere 123.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 127.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 127.8
Samples: 197

Max nTPM: 661.6
Min nTPM: 4.5
Std nTPM: 96.8
Median nTPM: 104.2
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 661.6
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 456.5
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 388.9
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 382.6
GTEX-11EI6-0011-R1a-SM-DO93L 60-69 years, male 362.5
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 356.5
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 347.2
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 340.4
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 338.5
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 338.1
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 333.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 21.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 21.0
FF:10169-103B7 60 years, female 28.0
FF:10153-102I9 76 years, female 14.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 176.2
Pig sample Sample description nTPM
Subiculum
nTPM: 112.6
Samples: 4

Max nTPM: 152.1
Min nTPM: 92.0
Sample A Female 152.1
Sample B Female 96.2
Sample C Male 110.1
Sample D Male 92.0
Dorsal hippocampus
nTPM: 86.3
Samples: 4

Max nTPM: 103.6
Min nTPM: 65.5
Sample A Female 102.8
Sample B Female 103.6
Sample C Male 73.1
Sample D Male 65.5
Entorhinal cortex
nTPM: 176.2
Samples: 4

Max nTPM: 200.9
Min nTPM: 150.2
Sample A Female 197.4
Sample B Female 150.2
Sample C Male 200.9
Sample D Male 156.1
Ventral hippocampus
nTPM: 101.8
Samples: 4

Max nTPM: 134.4
Min nTPM: 71.1
Sample A Female 82.3
Sample B Female 71.1
Sample C Male 134.4
Sample D Male 119.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 63.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 63.6
Samples: 4

Max nTPM: 75.1
Min nTPM: 53.0
Sample A Male 61.4
Sample B Male 64.8
Sample C Female 53.0
Sample D Female 75.1
Hippocampal formation
nTPM: 55.8
Samples: 4

Max nTPM: 60.6
Min nTPM: 51.5
Sample A Male 51.7
Sample B Male 60.6
Sample C Female 59.3
Sample D Female 51.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 14.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 14.6
73573223 Antisense, RP_051121_03_E06, Mouse strain C57BL/6J (56 days, male) 14.6
74640881 Antisense, RP_051121_03_E06, Mouse strain C57BL/6J (56 days, male) 12.7

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