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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:677.8 nTPM
HPA Brain:584.9 nTPM
GTEx:677.8 nTPM
FANTOM5:1111.3 Scaled Tags Per Million
Mouse:1295.6 nTPM
Allen mouse:0.1 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA053761Antibody CAB033687Antibody CAB037077
Glial cells Not detectedNot detectedLow
Neuronal cells Not detectedMediumHigh





BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

584.9
Sample id Sample description nTPM
Caudate nucleus
nTPM: 503.6
1781 Male, age 74, unknown 550.4
2481 Female, age 94, left hemisphere 545.7
2288 Male, age 75, left hemisphere 534.8
2846 Female, age 79, unknown 528.9
1857 Female, age 85, left hemisphere 518.5
2290 Female, age 72, unknown 512.0
1854 Male, age 80, left hemisphere 477.6
2289 Male, age 61, right hemisphere 361.0
Globus pallidus, externus
nTPM: 492.4
2395 Male, age 75, both hemispheres 636.7
2772 Female, age 79, unknown 585.9
1996 Male, age 80, right hemisphere 538.9
2646 Male, age 61, right hemisphere 357.7
2567 Female, age 72, unknown 342.5
Globus pallidus, internus
nTPM: 501.9
2287 Male, age 75, right hemisphere 646.2
2778 Female, age 91, both hemispheres 537.4
2483 Female, age 94, right hemisphere 499.4
2037 Male, age 80, right hemisphere 480.3
1818 Male, age 74, unknown 477.2
2111 Female, age 85, right hemisphere 442.0
2566 Female, age 72, unknown 431.1
Nucleus accumbens
nTPM: 497.4
1856 Female, age 91, right hemisphere 559.9
2391 Female, age 94, left hemisphere 541.1
2286 Male, age 75, left hemisphere 534.3
2698 Female, age 72, unknown 527.2
1806 Female, age 85, left hemisphere 511.8
1783 Male, age 74, unknown 494.0
2824 Male, age 61, right hemisphere 413.5
2732 Male, age 80, right hemisphere 397.3
Nucleus basalis of Meynert
nTPM: 443.8
2821 Male, age 75, both hemispheres 533.9
2484 Female, age 94, left hemisphere 454.5
2393 Male, age 80, right hemisphere 434.2
2569 Male, age 61, both hemispheres 352.6
Nucleus of the diagonal band
nTPM: 584.9
1812 Female, age 91, both hemispheres 653.2
2195 Female, age 85, both hemispheres 616.2
2029 Male, age 61, right hemisphere 615.9
2775 Male, age 80, right hemisphere 612.3
1979 Male, age 74, unknown 427.1
Putamen
nTPM: 458.7
2482 Female, age 94, left hemisphere 522.8
2466 Female, age 79, unknown 520.6
1937 Female, age 91, right hemisphere 472.6
1829 Male, age 74, unknown 441.1
1838 Male, age 80, right hemisphere 441.1
2647 Male, age 75, left hemisphere 412.8
2489 Female, age 72, unknown 400.0
Septal nuclei
nTPM: 575.6
1960 Male, age 74, unknown 748.5
2031 Female, age 72, unknown 679.6
2629 Female, age 94, right hemisphere 613.0
2059 Female, age 85, both hemispheres 556.7
2009 Female, age 91, both hemispheres 553.3
2199 Male, age 80, right hemisphere 447.7
2394 Male, age 61, left hemisphere 430.6
Stria terminalis, bed nucleus
nTPM: 547.1
1974 Female, age 91, both hemispheres 665.7
2486 Female, age 94, both hemispheres 557.5
2201 Male, age 74, unknown 418.1

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

677.8
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 623.7
Samples: 246

Max nTPM: 1166.7
Min nTPM: 329.7
Std nTPM: 130.2
Median nTPM: 618.0
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 1166.7
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 1104.0
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 948.4
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 924.9
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 922.1
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 921.0
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 916.8
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 890.2
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 881.1
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 877.1
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 876.5
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 862.2
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 858.3
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 840.3
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 836.8
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 834.0
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 827.8
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 823.2
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 823.0
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 812.2
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 811.1
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 807.9
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 803.7
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 793.9
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 791.0
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 789.6
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 784.6
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 782.0
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 780.5
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 780.4
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 778.0
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 777.8
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 763.2
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 761.5
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 758.9
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 758.4
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 757.1
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 755.7
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 753.8
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 753.2
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 748.6
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 746.4
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 736.5
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 733.3
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 733.3
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 731.0
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 729.9
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 729.9
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 727.0
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 726.3
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 723.3
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 719.6
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 714.8
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 713.0
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 712.0
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 710.6
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 707.5
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 703.5
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 703.2
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 700.8
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 699.5
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 697.5
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 693.7
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 692.6
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 690.9
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 690.2
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 689.8
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 686.6
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 685.8
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 685.0
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 682.4
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 681.5
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 679.8
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 676.2
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 675.4
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 674.7
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 674.1
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 672.6
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 668.4
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 668.4
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 668.2
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 665.7
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 664.4
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 660.5
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 658.0
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 655.9
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 655.8
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 655.1
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 654.5
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 651.2
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 651.0
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 650.1
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 648.1
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 646.2
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 645.2
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 645.0
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 643.7
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 642.2
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 641.2
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 638.7
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 637.6
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 635.8
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 635.8
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 635.5
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 634.9
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 634.1
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 633.5
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 631.8
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 631.1
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 629.7
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 629.6
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 627.1
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 626.8
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 625.6
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 625.5
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 625.5
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 625.0
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 624.9
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 623.0
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 621.6
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 620.3
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 620.3
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 618.0
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 618.0
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 614.0
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 612.3
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 609.7
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 609.3
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 606.5
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 605.9
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 604.5
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 603.7
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 602.1
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 602.0
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 601.0
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 600.9
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 596.8
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 595.1
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 594.8
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 594.1
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 590.8
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 590.7
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 588.9
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 588.4
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 588.0
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 586.8
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 586.3
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 585.7
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 585.3
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 585.0
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 584.8
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 579.7
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 579.7
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 577.7
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 572.9
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 572.7
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 571.6
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 566.1
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 565.3
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 564.6
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 562.8
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 562.2
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 559.3
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 559.2
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 558.6
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 555.6
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 555.5
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 550.2
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 549.7
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 547.9
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 547.1
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 546.8
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 546.7
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 545.6
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 545.5
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 545.3
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 544.3
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 543.6
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 543.2
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 542.1
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 541.0
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 536.4
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 536.0
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 535.9
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 535.5
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 534.1
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 533.6
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 529.7
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 529.5
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 527.5
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 526.8
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 526.2
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 526.1
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 525.3
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 520.5
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 517.5
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 515.8
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 514.0
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 511.1
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 510.3
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 509.5
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 507.4
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 505.0
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 503.6
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 503.3
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 503.2
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 500.1
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 499.8
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 495.2
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 494.8
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 494.3
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 493.2
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 493.1
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 492.2
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 488.2
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 485.1
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 476.1
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 473.9
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 473.7
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 470.3
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 468.9
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 466.9
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 466.2
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 462.2
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 462.0
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 454.7
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 453.8
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 451.8
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 448.7
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 446.3
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 444.9
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 443.5
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 441.6
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 431.1
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 430.7
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 418.2
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 412.2
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 408.6
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 407.4
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 399.1
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 395.1
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 392.7
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 388.4
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 374.7
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 349.0
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 329.7
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 658.8
Samples: 246

Max nTPM: 1264.2
Min nTPM: 336.8
Std nTPM: 125.0
Median nTPM: 658.0
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 1264.2
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 1020.5
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 1006.6
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 962.5
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 950.6
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 929.9
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 915.8
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 884.9
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 869.7
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 855.5
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 851.1
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 849.2
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 841.7
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 840.0
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 836.4
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 834.4
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 833.6
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 832.5
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 830.9
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 829.0
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 828.5
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 823.3
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 819.4
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 815.9
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 813.1
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 807.2
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 806.7
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 802.3
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 798.0
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 798.0
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 797.8
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 796.2
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 795.2
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 793.5
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 792.6
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 789.9
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 787.2
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 786.9
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 784.7
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 784.3
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 783.7
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 780.2
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 777.4
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 776.5
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 772.4
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 772.3
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 772.1
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 768.6
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 767.9
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 760.0
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 759.5
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 753.6
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 753.3
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 751.6
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 746.4
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 745.6
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 743.5
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 742.6
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 742.4
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 737.4
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 734.3
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 733.2
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 732.9
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 732.2
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 732.0
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 730.6
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 730.2
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 726.2
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 726.0
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 723.3
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 722.9
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 722.8
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 721.8
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 721.2
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 721.0
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 720.8
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 719.9
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 718.8
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 714.8
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 712.1
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 711.7
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 711.2
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 708.4
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 707.9
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 703.3
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 700.2
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 699.1
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 698.3
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 697.4
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 695.8
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 695.7
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 695.0
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 694.9
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 694.4
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 692.5
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 690.5
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 690.1
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 683.7
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 683.3
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 682.7
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 680.2
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 679.1
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 678.6
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 677.5
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 677.2
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 676.8
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 676.2
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 674.3
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 673.6
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 673.2
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 672.9
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 672.9
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 670.9
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 669.8
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 669.5
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 668.7
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 668.0
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 664.7
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 660.8
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 659.7
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 659.3
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 658.5
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 658.1
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 657.9
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 656.8
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 652.4
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 651.9
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 650.4
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 649.1
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 648.3
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 647.5
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 641.9
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 639.8
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 638.7
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 636.6
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 634.7
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 633.9
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 633.8
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 629.5
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 626.5
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 626.0
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 623.2
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 622.1
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 621.7
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 620.2
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 620.1
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 617.4
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 616.4
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 615.8
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 614.9
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 614.7
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 613.4
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 612.8
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 609.4
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 608.8
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 608.3
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 608.2
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 607.4
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 606.3
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 605.5
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 602.1
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 600.9
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 597.9
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 597.9
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 596.2
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 595.9
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 595.3
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 594.9
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 594.3
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 588.7
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 588.4
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 587.9
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 587.4
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 584.4
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 584.3
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 583.9
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 580.0
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 580.0
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 578.7
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 576.8
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 576.3
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 572.9
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 570.3
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 568.4
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 567.9
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 567.5
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 567.3
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 565.9
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 563.4
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 559.3
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 559.1
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 557.5
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 554.8
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 554.3
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 553.8
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 553.6
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 552.6
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 552.1
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 550.8
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 550.0
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 549.5
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 549.0
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 547.7
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 547.2
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 546.0
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 545.1
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 541.6
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 538.6
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 538.0
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 536.9
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 533.3
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 528.2
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 527.7
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 526.2
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 522.9
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 516.4
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 516.4
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 515.8
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 515.2
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 515.0
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 514.1
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 512.7
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 510.3
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 509.2
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 507.1
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 503.8
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 503.6
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 501.9
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 496.8
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 494.1
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 493.7
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 491.7
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 490.4
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 487.0
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 460.7
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 454.7
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 453.2
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 444.1
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 443.8
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 443.4
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 439.9
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 417.7
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 403.7
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 395.6
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 338.5
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 336.8
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Brain - Putamen (basal ganglia)
Average nTPM: 677.8
Samples: 205

Max nTPM: 1022.8
Min nTPM: 415.1
Std nTPM: 119.9
Median nTPM: 667.7
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 1022.8
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 992.1
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 986.8
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 971.1
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 963.2
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 961.5
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 950.2
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 932.9
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 930.8
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 919.3
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 916.8
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 916.6
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 900.7
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 895.9
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 880.9
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 878.1
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 853.4
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 847.8
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 842.1
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 841.2
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 838.3
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 835.0
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 834.5
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 834.0
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 808.6
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 808.6
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 808.4
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 808.0
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 806.8
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 803.7
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 801.2
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 800.8
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 799.3
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 797.6
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 784.8
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 783.7
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 781.4
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 775.8
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 774.0
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 771.9
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 767.3
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 765.6
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 763.2
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 762.4
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 755.3
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 754.1
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 753.9
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 753.5
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 749.6
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 749.5
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 748.4
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 746.8
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 745.9
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 745.4
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 744.2
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 740.5
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 740.0
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 739.0
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 738.2
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 736.0
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 731.4
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 731.2
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 730.6
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 725.8
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 724.8
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 723.5
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 722.5
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 721.7
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 721.5
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 718.3
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 716.5
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 711.3
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 705.7
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 705.4
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 704.3
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 701.5
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 700.9
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 698.4
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 696.4
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 693.9
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 692.0
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 688.4
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 686.0
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 685.6
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 685.4
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 684.1
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 683.9
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 683.7
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 680.2
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 679.6
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 678.8
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 677.8
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 677.7
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 677.2
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 676.0
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 675.8
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 675.3
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 673.1
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 672.9
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 671.8
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 671.0
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 670.4
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 667.7
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 666.5
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 664.8
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 663.6
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 662.4
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 661.1
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 658.2
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 658.0
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 657.9
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 656.8
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 652.0
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 652.0
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 648.8
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 647.9
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 647.7
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 647.2
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 646.3
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 645.7
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 642.3
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 642.3
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 641.3
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 639.6
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 639.0
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 635.6
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 632.4
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 631.9
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 631.7
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 631.5
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 631.2
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 630.5
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 629.2
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 625.9
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 624.2
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 622.8
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 620.9
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 617.4
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 616.1
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 615.7
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 614.9
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 614.4
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 612.0
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 611.6
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 610.9
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 609.8
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 609.6
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 606.4
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 606.1
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 600.5
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 600.1
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 596.6
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 594.5
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 593.2
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 592.6
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 591.0
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 589.4
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 586.2
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 586.1
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 585.9
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 582.8
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 581.4
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 581.2
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 578.1
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 577.4
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 572.3
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 571.3
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 567.9
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 567.8
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 566.8
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 565.7
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 564.0
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 562.1
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 561.9
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 558.4
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 557.7
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 557.2
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 556.9
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 556.5
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 555.9
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 553.4
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 550.2
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 548.4
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 546.8
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 538.9
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 536.1
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 534.9
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 528.7
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 526.5
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 522.8
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 519.8
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 519.6
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 513.1
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 511.6
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 511.1
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 496.8
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 492.9
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 490.8
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 471.5
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 451.7
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 439.8
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 438.1
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 423.5
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 419.9
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 415.1
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

1111.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 723.7
FF:10164-103B2 76 years, female 723.7
Nucleus accumbens
Scaled Tags Per Million: 1111.3
FF:10037-101F1 23-56 years, mixed 1111.3
Putamen
Scaled Tags Per Million: 912.5
FF:10176-103C5 60 years, female 912.5
Globus pallidus
Scaled Tags Per Million: 664.8
FF:10161-103A8 76 years, female 785.7
FF:10175-103C4 60 years, female 543.8

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1295.6
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 1295.7
Samples: 4

Max nTPM: 1372.4
Min nTPM: 1216.1
Sample A Male 1241.9
Sample B Male 1216.1
Sample C Female 1352.2
Sample D Female 1372.4
Septum
nTPM: 1229.1
Samples: 4

Max nTPM: 1335.7
Min nTPM: 1160.5
Sample A Male 1160.5
Sample B Male 1335.7
Sample C Female 1246.3
Sample D Female 1173.7
Ventral forebrain
nTPM: 1258.4
Samples: 4

Max nTPM: 1378.7
Min nTPM: 1174.2
Sample A Male 1174.2
Sample B Male 1189.3
Sample C Female 1378.7
Sample D Female 1291.2

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.1
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 0.1
70719651 Antisense, RP_050426_02_D11, Mouse strain C57BL/6J (56 days, male) 0.1
Pallidum
Expression energy: 0.0
70719651 Antisense, RP_050426_02_D11, Mouse strain C57BL/6J (56 days, male) 0.0

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