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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
643.0
nTPM
FANTOM5:
1156.2
Scaled Tags Per Million
Allen mouse:
0.1
Expression energy
PONS - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
643.0
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 532.8
2188
Female, age 91, both hemispheres
588.2
2301
Female, age 85, both hemispheres
551.1
2090
Male, age 80, both hemispheres
546.4
1984
Male, age 76, both hemispheres
445.6
Dorsal cochlear nucleus nTPM: 515.2
2187
Female, age 91, both hemispheres
593.8
2802
Male, age 74, right hemisphere
515.9
2370
Male, age 61, both hemispheres
503.9
2378
Male, age 80, both hemispheres
491.4
2058
Male, age 76, both hemispheres
471.0
Dorsal tegmental nucleus nTPM: 551.9
2358
Male, age 61, both hemispheres
699.5
2083
Male, age 80, both hemispheres
564.1
2326
Male, age 74, both hemispheres
511.0
1936
Male, age 76, left hemisphere
432.9
Dorsolateral tegmental area nTPM: 533.2
2337
Male, age 61, both hemispheres
709.0
2654
Male, age 80, both hemispheres
557.8
2751
Female, age 85, both hemispheres
514.5
2360
Male, age 74, both hemispheres
460.2
2141
Male, age 76, both hemispheres
424.6
Kolliker-Fuse nucleus nTPM: 570.2
2163
Male, age 80, both hemispheres
598.5
2793
Female, age 91, left hemisphere
585.0
2315
Male, age 76, right hemisphere
527.2
Lateral lemniscal nuclei nTPM: 520.3
2169
Male, age 76, both hemispheres
600.6
2746
Female, age 85, left hemisphere
564.1
2453
Male, age 74, right hemisphere
520.6
2320
Female, age 91, left hemisphere
463.6
2036
Male, age 80, both hemispheres
452.7
Lateral parabrachial nucleus nTPM: 541.7
2139
Female, age 85, right hemisphere
619.9
2013
Male, age 80, both hemispheres
553.5
2792
Male, age 76, both hemispheres
539.6
2790
Male, age 61, both hemispheres
453.9
Lateral vestibular nucleus nTPM: 557.6
2311
Male, age 80, both hemispheres
563.4
2184
Male, age 76, both hemispheres
551.8
Locus coeruleus nTPM: 570.0
2123
Female, age 91, both hemispheres
722.6
2014
Male, age 55, unknown
607.6
2720
Male, age 74, both hemispheres
604.0
1980
Male, age 76, both hemispheres
550.7
2162
Male, age 80, both hemispheres
528.6
2317
Female, age 72, unknown
504.9
2788
Male, age 74, unknown
471.9
Medial parabrachial nucleus nTPM: 529.6
2170
Female, age 91, both hemispheres
643.9
2854
Male, age 80, both hemispheres
558.0
2156
Male, age 61, both hemispheres
488.0
2786
Male, age 76, both hemispheres
483.9
2463
Female, age 85, right hemisphere
474.4
Medial periolivary nuclei nTPM: 569.8
2171
Female, age 85, both hemispheres
663.5
2063
Male, age 76, both hemispheres
619.7
2791
Male, age 74, right hemisphere
549.1
2081
Male, age 80, both hemispheres
543.1
2458
Female, age 91, both hemispheres
473.6
Motor facial nucleus nTPM: 551.6
2365
Male, age 74, right hemisphere
642.3
2062
Male, age 76, both hemispheres
631.3
2697
Female, age 85, both hemispheres
583.0
2126
Male, age 61, both hemispheres
540.6
2327
Male, age 80, both hemispheres
469.1
2795
Female, age 91, both hemispheres
443.5
Motor trigeminal nucleus nTPM: 515.0
2335
Male, age 61, both hemispheres
584.3
2560
Male, age 74, both hemispheres
547.4
2079
Male, age 80, both hemispheres
540.6
2309
Male, age 76, both hemispheres
455.6
2321
Female, age 91, both hemispheres
447.0
Nuclei of the trapezoid body nTPM: 588.6
2159
Male, age 61, both hemispheres
696.5
2735
Female, age 85, both hemispheres
624.1
1983
Male, age 76, both hemispheres
621.2
2166
Male, age 80, both hemispheres
557.2
2368
Female, age 91, both hemispheres
443.9
Nucleus raphe magnus nTPM: 587.2
2160
Male, age 61, both hemispheres
759.1
2172
Female, age 85, both hemispheres
645.9
2455
Male, age 74, both hemispheres
587.8
2051
Male, age 76, both hemispheres
534.5
2328
Male, age 80, both hemispheres
512.7
2459
Female, age 91, both hemispheres
482.9
Paramedian reticular nucleus nTPM: 540.8
2050
Female, age 85, both hemispheres
613.7
2057
Male, age 80, both hemispheres
569.9
2313
Male, age 61, both hemispheres
530.8
2052
Male, age 76, both hemispheres
448.8
Pedunculopontine tegmental nucleus nTPM: 545.2
2338
Male, age 61, both hemispheres
648.1
2334
Male, age 80, both hemispheres
537.6
1921
Female, age 85, both hemispheres
450.1
Pontine nuclei nTPM: 643.0
1863
Male, age 55, unknown
780.6
2787
Female, age 85, both hemispheres
762.2
2727
Male, age 61, right hemisphere
698.0
2109
Female, age 72, unknown
627.9
2454
Male, age 74, left hemisphere
601.1
1968
Male, age 76, left hemisphere
585.9
2115
Male, age 80, left hemisphere
566.9
2319
Female, age 91, both hemispheres
521.7
Pontine raphe nucleus nTPM: 519.8
2122
Female, age 85, midline
571.9
2853
Male, age 76, midline
467.7
Posteroventral cochlear nucleus nTPM: 523.8
2070
Male, age 76, both hemispheres
557.0
2135
Female, age 91, both hemispheres
533.1
2752
Female, age 85, both hemispheres
531.5
2341
Male, age 80, both hemispheres
528.4
2371
Male, age 61, both hemispheres
469.0
Principal sensory trigeminal nucleus nTPM: 580.9
2158
Male, age 61, both hemispheres
743.7
2367
Female, age 91, left hemisphere
535.1
2008
Male, age 80, left hemisphere
532.1
2324
Male, age 76, both hemispheres
512.9
Reticular pontine nucleus, caudal nTPM: 532.3
2092
Male, age 76, both hemispheres
594.8
2559
Male, age 74, both hemispheres
549.7
2332
Male, age 80, right hemisphere
493.1
2457
Female, age 91, both hemispheres
491.8
Reticular pontine nucleus, oral nTPM: 532.7
2361
Male, age 74, both hemispheres
593.6
2012
Female, age 85, both hemispheres
530.5
1939
Male, age 80, both hemispheres
517.3
2167
Male, age 76, both hemispheres
513.4
2366
Female, age 91, both hemispheres
508.9
Reticulotegmental nucleus nTPM: 515.2
2452
Male, age 74, both hemispheres
531.7
2322
Female, age 91, both hemispheres
527.3
2333
Male, age 80, both hemispheres
506.5
2325
Male, age 76, both hemispheres
495.4
Spinal trigeminal nucleus, oral nTPM: 520.1
2164
Male, age 80, both hemispheres
552.5
2737
Female, age 85, both hemispheres
515.7
1978
Male, age 76, both hemispheres
492.1
Subcoeruleus area nTPM: 502.9
1958
Male, age 80, both hemispheres
547.9
2323
Female, age 91, left hemisphere
528.7
2369
Female, age 85, left hemisphere
495.8
2089
Male, age 76, left hemisphere
493.5
2451
Male, age 74, both hemispheres
448.8
Superior olive nTPM: 569.2
2364
Male, age 74, right hemisphere
666.4
1875
Female, age 85, both hemispheres
596.8
2020
Male, age 76, both hemispheres
548.0
2561
Female, age 91, both hemispheres
527.2
2329
Male, age 80, right hemisphere
507.5
Ventral periolivary nuclei nTPM: 535.9
2130
Female, age 85, both hemispheres
588.1
2165
Male, age 80, both hemispheres
571.8
2023
Male, age 76, both hemispheres
542.4
2794
Female, age 91, left hemisphere
441.6
Ventrolateral tegmental area, A5 NE cell group nTPM: 536.1
2359
Male, age 61, both hemispheres
568.0
2449
Male, age 74, both hemispheres
552.4
2161
Male, age 80, both hemispheres
545.6
2840
Female, age 85, both hemispheres
544.1
1959
Male, age 76, both hemispheres
541.8
2456
Female, age 91, both hemispheres
464.9
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.
The Human Protein Atlas project is funded
