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TRMT112
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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:70.8 nTPM
HPA Brain:56.4 nTPM
GTEx:70.8 nTPM
FANTOM5:86.8 Scaled Tags Per Million
Pig:100.8 nTPM
Mouse:39.6 nTPM
Allen mouse:0.8 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA039901Antibody HPA040006
Glial cells Not detectedMedium
Neuronal cells MediumMedium




BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

56.4
Sample id Sample description nTPM
Caudate nucleus
nTPM: 50.6
2481 Female, age 94, left hemisphere 62.4
2846 Female, age 79, unknown 55.7
1857 Female, age 85, left hemisphere 51.2
1854 Male, age 80, left hemisphere 49.5
1781 Male, age 74, unknown 49.1
2290 Female, age 72, unknown 48.5
2288 Male, age 75, left hemisphere 48.0
2289 Male, age 61, right hemisphere 40.3
Globus pallidus, externus
nTPM: 56.4
2395 Male, age 75, both hemispheres 74.0
2772 Female, age 79, unknown 67.8
1996 Male, age 80, right hemisphere 59.3
2646 Male, age 61, right hemisphere 43.6
2567 Female, age 72, unknown 37.2
Globus pallidus, internus
nTPM: 55.4
2287 Male, age 75, right hemisphere 73.0
2483 Female, age 94, right hemisphere 61.8
2778 Female, age 91, both hemispheres 59.1
2037 Male, age 80, right hemisphere 53.4
1818 Male, age 74, unknown 50.3
2566 Female, age 72, unknown 49.7
2111 Female, age 85, right hemisphere 40.5
Nucleus accumbens
nTPM: 54.3
2391 Female, age 94, left hemisphere 71.5
2698 Female, age 72, unknown 66.0
2286 Male, age 75, left hemisphere 58.5
1856 Female, age 91, right hemisphere 55.6
2824 Male, age 61, right hemisphere 50.4
1806 Female, age 85, left hemisphere 45.5
1783 Male, age 74, unknown 44.8
2732 Male, age 80, right hemisphere 42.1
Nucleus basalis of Meynert
nTPM: 50.5
2821 Male, age 75, both hemispheres 65.3
2484 Female, age 94, left hemisphere 48.4
2393 Male, age 80, right hemisphere 46.8
2569 Male, age 61, both hemispheres 41.5
Nucleus of the diagonal band
nTPM: 55.4
1812 Female, age 91, both hemispheres 67.7
2775 Male, age 80, right hemisphere 62.2
2195 Female, age 85, both hemispheres 50.4
2029 Male, age 61, right hemisphere 48.8
1979 Male, age 74, unknown 47.8
Putamen
nTPM: 46.2
2482 Female, age 94, left hemisphere 68.7
1937 Female, age 91, right hemisphere 53.3
2466 Female, age 79, unknown 45.6
2647 Male, age 75, left hemisphere 42.4
1838 Male, age 80, right hemisphere 41.4
1829 Male, age 74, unknown 39.1
2489 Female, age 72, unknown 32.8
Septal nuclei
nTPM: 52.1
2031 Female, age 72, unknown 68.4
1960 Male, age 74, unknown 62.6
2009 Female, age 91, both hemispheres 52.6
2629 Female, age 94, right hemisphere 50.6
2199 Male, age 80, right hemisphere 43.8
2394 Male, age 61, left hemisphere 43.6
2059 Female, age 85, both hemispheres 43.3
Stria terminalis, bed nucleus
nTPM: 50.1
1974 Female, age 91, both hemispheres 65.6
2201 Male, age 74, unknown 44.5
2486 Female, age 94, both hemispheres 40.4

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

70.8
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 66.1
Samples: 246

Max nTPM: 127.3
Min nTPM: 29.2
Std nTPM: 15.9
Median nTPM: 64.3
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 127.3
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 126.6
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 125.5
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 122.8
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 120.4
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 115.9
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 105.8
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 100.8
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 98.5
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 98.3
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 97.2
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 94.3
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 93.6
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 93.2
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 92.4
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 92.1
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 91.9
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 90.9
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 88.3
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 87.8
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 85.1
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 85.0
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 85.0
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 84.8
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 84.1
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 83.8
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 83.8
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 83.2
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 82.4
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 81.6
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 81.6
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 80.9
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 80.7
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 79.8
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 79.6
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 79.6
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 79.4
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 78.8
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 78.7
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 78.5
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 78.1
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 78.0
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 77.8
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 77.7
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 77.4
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 77.4
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 77.3
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 77.2
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 77.1
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 76.6
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 76.5
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 76.3
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 76.3
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 76.2
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 76.0
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 75.8
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 75.7
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 75.1
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 74.8
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 74.8
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 74.6
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 74.2
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 74.1
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 73.4
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 73.3
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 73.3
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 72.9
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 72.8
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 72.8
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 72.8
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 72.5
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 72.0
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 72.0
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 71.8
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 71.6
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 71.5
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 71.0
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 70.9
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 70.7
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 70.4
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 70.1
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 69.2
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 69.1
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 69.0
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 69.0
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 69.0
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 68.8
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 68.8
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 68.6
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 68.6
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 68.5
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 68.2
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 68.0
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 68.0
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 67.4
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 67.2
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 67.1
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 67.0
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 66.8
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 66.8
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 66.5
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 66.5
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 66.3
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 66.1
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 66.0
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 66.0
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 65.9
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 65.8
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 65.7
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 65.6
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 65.5
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 65.5
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 65.4
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 65.4
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 65.3
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 65.3
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 65.1
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 65.0
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 64.9
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 64.8
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 64.7
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 64.6
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 64.5
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 64.2
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 64.1
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 64.0
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 64.0
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 63.8
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 63.7
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 63.7
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 63.5
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 63.4
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 63.0
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 62.4
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 62.4
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 62.0
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 62.0
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 61.9
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 61.8
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 61.6
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 61.6
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 61.6
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 61.4
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 61.2
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 61.2
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 61.2
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 61.0
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 61.0
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 61.0
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 60.9
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 60.6
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 60.5
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 60.3
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 60.1
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 60.0
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 59.9
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 59.7
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 59.7
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 59.7
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 59.3
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 59.1
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 59.1
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 58.8
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 58.6
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 58.6
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 58.4
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 58.4
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 58.3
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 58.3
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 58.2
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 58.2
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 58.2
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 57.9
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 57.7
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 57.7
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 57.5
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 57.4
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 57.2
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 57.2
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 57.1
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 57.1
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 57.0
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 56.9
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 56.3
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 56.2
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 56.2
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 56.1
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 55.8
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 55.8
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 55.4
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 55.3
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 54.9
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 54.8
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 54.8
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 54.4
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 54.4
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 54.3
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 54.2
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 54.0
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 53.9
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 53.7
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 53.3
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 52.9
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 52.5
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 52.3
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 52.2
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 52.0
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 51.8
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 51.7
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 51.6
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 51.5
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 51.4
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 51.4
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 51.3
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 51.2
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 50.7
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 50.6
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 50.2
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 50.2
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 50.2
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 49.8
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 49.6
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 49.6
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 49.0
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 49.0
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 47.8
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 47.7
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 46.9
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 46.4
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 46.0
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 45.9
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 45.8
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 45.7
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 45.6
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 45.0
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 43.8
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 42.8
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 41.6
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 41.5
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 37.8
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 37.0
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 36.3
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 35.4
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 34.2
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 30.2
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 29.2
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 70.8
Samples: 246

Max nTPM: 143.4
Min nTPM: 34.4
Std nTPM: 18.2
Median nTPM: 68.8
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 143.4
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 142.3
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 133.6
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 132.8
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 121.8
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 119.8
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 117.8
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 109.6
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 108.1
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 107.3
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 106.7
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 104.0
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 103.9
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 100.1
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 99.9
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 99.9
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 99.8
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 97.3
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 97.2
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 97.1
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 95.1
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 95.0
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 94.9
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 92.8
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 91.8
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 91.5
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 91.5
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 91.1
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 90.4
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 90.4
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 89.7
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 89.3
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 89.2
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 88.9
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 88.7
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 88.3
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 88.2
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 88.0
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 87.9
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 87.0
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 86.6
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 85.8
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 85.6
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 85.5
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 85.2
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 84.4
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 83.6
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 83.5
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 83.4
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 83.3
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 83.3
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 82.7
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 82.5
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 82.4
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 81.4
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 81.3
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 81.3
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 81.1
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 80.9
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 80.8
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 80.5
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 80.4
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 80.3
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 79.9
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 79.5
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 79.4
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 79.3
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 79.0
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 79.0
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 78.8
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 78.6
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 78.2
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 78.1
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 78.1
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 77.5
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 77.2
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 77.2
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 77.0
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 76.7
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 76.7
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 76.5
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 76.5
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 76.2
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 76.1
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 75.6
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 75.1
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 75.0
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 74.5
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 74.4
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 74.3
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 74.3
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 74.1
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 74.0
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 73.9
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 73.6
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 73.4
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 73.4
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 72.8
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 72.7
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 72.4
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 72.3
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 72.1
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 71.3
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 71.2
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 71.2
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 71.2
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 71.1
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 71.0
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 71.0
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 70.8
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 70.5
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 70.5
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 70.1
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 70.0
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 70.0
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 70.0
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 69.9
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 69.8
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 69.6
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 69.3
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 69.3
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 68.9
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 68.8
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 68.8
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 68.8
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 68.7
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 68.6
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 68.6
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 68.4
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 68.2
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 68.1
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 67.6
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 67.4
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 67.4
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 67.2
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 67.2
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 67.0
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 67.0
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 66.8
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 66.6
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 66.4
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 66.0
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 65.9
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 65.9
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 65.4
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 65.2
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 65.1
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 64.8
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 64.6
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 64.5
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 64.3
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 64.0
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 63.9
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 63.6
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 63.2
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 63.0
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 63.0
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 62.3
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 61.9
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 61.9
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 61.6
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 61.6
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 61.4
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 61.0
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 61.0
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 60.8
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 60.8
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 60.7
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 60.3
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 60.1
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 59.8
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 59.7
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 59.6
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 59.5
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 59.5
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 59.4
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 59.1
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 58.9
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 58.4
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 58.4
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 58.2
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 58.0
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 57.9
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 57.3
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 57.2
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 57.0
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 57.0
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 56.8
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 56.4
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 56.3
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 56.2
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 55.6
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 55.4
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 55.2
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 55.0
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 54.5
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 54.4
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 54.4
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 54.3
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 54.3
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 54.3
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 54.3
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 54.1
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 53.8
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 53.7
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 53.6
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 53.6
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 53.5
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 53.5
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 53.5
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 53.4
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 53.3
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 53.2
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 52.7
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 52.7
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 52.0
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 51.9
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 51.9
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 51.6
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 51.5
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 51.3
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 51.2
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 51.0
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 50.7
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 50.6
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 50.5
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 50.1
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 50.1
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 49.3
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 48.8
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 48.6
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 48.1
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 47.9
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 47.3
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 45.8
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 45.4
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 44.8
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 44.2
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 43.7
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 43.6
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 43.0
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 40.6
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 40.4
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 39.1
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 38.1
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 34.4
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Brain - Putamen (basal ganglia)
Average nTPM: 70.4
Samples: 205

Max nTPM: 161.8
Min nTPM: 38.0
Std nTPM: 16.0
Median nTPM: 67.7
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 161.8
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 123.8
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 112.3
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 109.0
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 105.7
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 103.0
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 101.6
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 101.2
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 100.5
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 98.3
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 97.2
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 97.0
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 95.6
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 95.2
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 94.1
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 93.6
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 93.6
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 92.7
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 91.6
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 90.7
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 89.9
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 89.2
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 89.2
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 89.1
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 89.1
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 89.0
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 87.5
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 86.8
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 86.7
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 86.7
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 86.2
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 85.7
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 85.7
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 85.5
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 85.1
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 83.9
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 83.3
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 83.3
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 83.2
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 83.0
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 82.5
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 82.3
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 82.1
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 82.0
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 81.8
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 81.6
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 81.3
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 81.3
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 81.3
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 80.9
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 80.2
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 80.1
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 80.0
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 79.8
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 79.1
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 79.0
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 78.7
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 78.3
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 78.2
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 77.1
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 76.4
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 76.1
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 75.9
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 75.8
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 75.7
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 75.5
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 75.3
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 75.1
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 74.7
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 74.5
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 74.5
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 74.5
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 74.3
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 73.6
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 73.3
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 73.1
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 72.7
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 72.6
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 72.2
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 72.1
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 72.1
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 72.0
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 71.9
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 71.2
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 70.9
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 70.7
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 70.4
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 70.3
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 70.1
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 69.9
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 69.9
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 69.9
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 69.2
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 69.1
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 69.1
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 69.1
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 68.5
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 68.2
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 68.1
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 67.9
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 67.8
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 67.7
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 67.7
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 67.5
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 67.2
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 66.9
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 66.9
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 66.6
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 66.2
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 66.1
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 66.0
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 65.9
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 65.9
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 65.7
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 65.6
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 65.6
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 65.6
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 65.6
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 65.0
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 64.7
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 64.5
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 64.5
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 64.4
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 64.3
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 64.3
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 64.3
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 64.1
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 64.0
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 64.0
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 63.6
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 63.3
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 63.2
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 62.8
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 62.4
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 62.2
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 62.0
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 61.9
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 61.8
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 61.7
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 61.5
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 61.3
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 60.8
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 60.6
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 60.5
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 60.4
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 60.2
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 60.2
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 60.1
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 59.9
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 59.6
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 59.5
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 59.4
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 59.4
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 59.3
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 58.9
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 58.7
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 58.6
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 58.5
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 58.4
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 58.4
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 58.4
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 58.3
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 58.1
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 58.0
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 57.6
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 56.8
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 56.8
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 56.7
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 56.1
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 55.5
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 55.5
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 55.4
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 55.3
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 55.0
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 54.8
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 54.5
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 54.3
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 54.2
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 54.2
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 54.1
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 54.1
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 54.0
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 53.8
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 53.5
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 53.2
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 53.1
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 53.0
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 52.9
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 52.4
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 52.2
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 51.8
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 51.5
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 51.2
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 51.2
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 50.8
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 50.3
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 50.0
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 49.3
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 49.3
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 49.0
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 45.6
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 43.3
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 40.7
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 40.2
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 38.0
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

86.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 83.3
FF:10164-103B2 76 years, female 83.3
Nucleus accumbens
Scaled Tags Per Million: 86.8
FF:10037-101F1 23-56 years, mixed 86.8
Putamen
Scaled Tags Per Million: 84.4
FF:10176-103C5 60 years, female 84.4
Globus pallidus
Scaled Tags Per Million: 83.3
FF:10175-103C4 60 years, female 93.3
FF:10161-103A8 76 years, female 73.3

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

100.8
Pig sample Sample description nTPM
Caudate
nTPM: 79.8
Samples: 4

Max nTPM: 97.0
Min nTPM: 60.0
Sample A Female 83.3
Sample B Female 97.0
Sample C Male 78.7
Sample D Male 60.0
Putamen
nTPM: 85.9
Samples: 4

Max nTPM: 97.5
Min nTPM: 70.2
Sample A Female 94.8
Sample B Female 70.2
Sample C Male 97.5
Sample D Male 81.2
Septum
nTPM: 100.9
Samples: 4

Max nTPM: 118.1
Min nTPM: 85.3
Sample A Female 118.1
Sample B Female 99.5
Sample C Male 100.5
Sample D Male 85.3
Ventral pallidum
nTPM: 81.1
Samples: 4

Max nTPM: 102.9
Min nTPM: 67.9
Sample A Female 82.0
Sample B Female 102.9
Sample C Male 71.7
Sample D Male 67.9

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

39.6
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 25.1
Samples: 4

Max nTPM: 30.9
Min nTPM: 20.2
Sample A Male 25.4
Sample B Male 30.9
Sample C Female 23.7
Sample D Female 20.2
Septum
nTPM: 39.6
Samples: 4

Max nTPM: 43.7
Min nTPM: 31.8
Sample A Male 43.7
Sample B Male 39.8
Sample C Female 42.9
Sample D Female 31.8
Ventral forebrain
nTPM: 31.7
Samples: 4

Max nTPM: 34.8
Min nTPM: 29.7
Sample A Male 29.7
Sample B Male 34.8
Sample C Female 31.0
Sample D Female 31.2

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.8
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 0.6
71654121 Antisense, RP_050927_03_D04, Mouse strain C57BL/6J (56 days, male) 0.6
Pallidum
Expression energy: 0.8
71654121 Antisense, RP_050927_03_D04, Mouse strain C57BL/6J (56 days, male) 0.8

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