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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:306.2 nTPM
HPA Brain:105.3 nTPM
GTEx:306.2 nTPM
FANTOM5:360.5 Scaled Tags Per Million
Mouse:993.3 nTPM
Allen mouse:2.9 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA042574
Glial cells Not detected
Neuronal cells Medium



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

105.3
Sample id Sample description nTPM
Caudate nucleus
nTPM: 93.8
2481 Female, age 94, left hemisphere 120.4
1781 Male, age 74, unknown 113.0
2846 Female, age 79, unknown 104.6
1857 Female, age 85, left hemisphere 95.6
1854 Male, age 80, left hemisphere 93.9
2290 Female, age 72, unknown 86.7
2288 Male, age 75, left hemisphere 81.5
2289 Male, age 61, right hemisphere 54.7
Globus pallidus, externus
nTPM: 90.2
2772 Female, age 79, unknown 139.2
1996 Male, age 80, right hemisphere 104.6
2395 Male, age 75, both hemispheres 97.5
2646 Male, age 61, right hemisphere 55.3
2567 Female, age 72, unknown 54.5
Globus pallidus, internus
nTPM: 92.5
2483 Female, age 94, right hemisphere 123.1
1818 Male, age 74, unknown 120.4
2287 Male, age 75, right hemisphere 113.9
2037 Male, age 80, right hemisphere 98.3
2778 Female, age 91, both hemispheres 84.4
2566 Female, age 72, unknown 57.6
2111 Female, age 85, right hemisphere 49.8
Nucleus accumbens
nTPM: 98.0
1856 Female, age 91, right hemisphere 141.0
2286 Male, age 75, left hemisphere 109.2
2698 Female, age 72, unknown 105.6
1783 Male, age 74, unknown 104.4
1806 Female, age 85, left hemisphere 98.4
2391 Female, age 94, left hemisphere 89.0
2824 Male, age 61, right hemisphere 76.3
2732 Male, age 80, right hemisphere 59.8
Nucleus basalis of Meynert
nTPM: 85.1
2821 Male, age 75, both hemispheres 116.0
2484 Female, age 94, left hemisphere 82.6
2393 Male, age 80, right hemisphere 81.3
2569 Male, age 61, both hemispheres 60.4
Nucleus of the diagonal band
nTPM: 105.3
1812 Female, age 91, both hemispheres 142.1
2775 Male, age 80, right hemisphere 130.8
2029 Male, age 61, right hemisphere 97.6
2195 Female, age 85, both hemispheres 92.4
1979 Male, age 74, unknown 63.7
Putamen
nTPM: 91.5
1838 Male, age 80, right hemisphere 113.9
1937 Female, age 91, right hemisphere 103.3
2482 Female, age 94, left hemisphere 102.5
2466 Female, age 79, unknown 96.1
1829 Male, age 74, unknown 84.5
2647 Male, age 75, left hemisphere 83.9
2489 Female, age 72, unknown 55.9
Septal nuclei
nTPM: 85.4
2031 Female, age 72, unknown 120.5
1960 Male, age 74, unknown 114.0
2009 Female, age 91, both hemispheres 106.5
2629 Female, age 94, right hemisphere 80.1
2059 Female, age 85, both hemispheres 61.2
2394 Male, age 61, left hemisphere 59.1
2199 Male, age 80, right hemisphere 56.2
Stria terminalis, bed nucleus
nTPM: 83.5
1974 Female, age 91, both hemispheres 119.7
2486 Female, age 94, both hemispheres 74.0
2201 Male, age 74, unknown 56.8

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

306.2
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 263.1
Samples: 246

Max nTPM: 734.1
Min nTPM: 118.4
Std nTPM: 94.6
Median nTPM: 247.4
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 734.1
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 712.1
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 691.0
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 600.8
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 564.6
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 530.8
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 509.1
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 466.2
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 455.1
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 449.9
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 449.6
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 435.8
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 435.4
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 428.5
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 424.7
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 417.4
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 409.5
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 409.3
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 402.4
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 398.9
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 391.6
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 389.3
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 372.6
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 368.3
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 365.4
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 365.4
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 364.5
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 363.2
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 356.6
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 355.8
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 355.6
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 353.5
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 350.9
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 347.2
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 346.1
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 342.1
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 341.0
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 336.7
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 334.8
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 334.6
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 332.7
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 329.2
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 326.6
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 325.6
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 324.7
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 319.7
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 316.9
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 313.3
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 310.0
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 309.7
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 309.6
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 309.4
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 306.4
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 304.6
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 304.4
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 303.0
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 302.3
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 299.7
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 299.4
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 298.7
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 298.7
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 298.2
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 297.7
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 297.4
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 297.1
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 294.4
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 293.2
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 292.5
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 291.6
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 289.7
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 288.7
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 287.3
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 286.3
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 286.1
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 283.7
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 283.3
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 283.1
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 281.3
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 279.9
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 279.3
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 278.8
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 278.8
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 277.6
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 277.5
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 277.0
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 275.8
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 275.0
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 274.2
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 272.0
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 271.2
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 269.9
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 269.8
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 269.6
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 268.1
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 267.6
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 266.5
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 266.4
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 266.1
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 264.5
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 261.8
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 261.4
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 261.2
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 261.1
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 258.9
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 258.6
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 258.3
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 257.6
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 256.0
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 255.9
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 255.8
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 255.5
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 254.0
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 253.5
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 253.5
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 251.3
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 250.3
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 250.2
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 249.4
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 249.1
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 248.0
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 247.8
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 247.8
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 247.6
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 247.2
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 246.5
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 246.4
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 245.9
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 245.4
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 244.5
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 244.3
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 242.8
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 242.2
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 241.6
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 241.5
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 241.0
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 239.6
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 238.2
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 238.2
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 238.1
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 237.6
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 236.7
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 236.1
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 235.8
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 234.9
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 233.2
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 233.0
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 232.0
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 228.9
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 228.8
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 228.8
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 228.7
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 227.7
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 227.4
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 226.9
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 224.6
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 223.4
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 223.0
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 222.6
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 222.3
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 221.5
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 221.4
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 221.4
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 220.8
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 220.6
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 220.4
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 219.6
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 217.6
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 215.0
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 213.1
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 212.4
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 210.3
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 208.6
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 206.8
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 206.0
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 205.5
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 204.7
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 203.5
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 203.4
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 203.3
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 202.2
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 201.4
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 201.0
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 200.9
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 198.8
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 197.8
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 197.6
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 196.4
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 195.8
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 194.2
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 192.6
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 192.4
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 192.2
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 191.8
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 191.8
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 191.6
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 191.2
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 190.1
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 189.5
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 189.5
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 189.3
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 186.3
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 185.7
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 183.6
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 183.5
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 183.1
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 180.5
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 179.5
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 179.0
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 178.6
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 178.3
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 177.2
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 176.1
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 174.1
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 173.6
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 173.5
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 172.5
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 171.0
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 170.4
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 169.3
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 169.3
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 169.1
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 168.8
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 168.7
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 168.6
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 168.2
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 166.6
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 164.8
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 161.9
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 161.1
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 159.5
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 159.0
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 158.4
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 156.6
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 153.4
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 151.8
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 149.9
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 148.5
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 148.3
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 148.1
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 147.0
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 145.6
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 144.6
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 137.7
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 137.7
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 135.5
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 118.4
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 306.2
Samples: 246

Max nTPM: 762.0
Min nTPM: 142.7
Std nTPM: 91.3
Median nTPM: 301.5
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 762.0
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 635.5
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 627.7
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 579.5
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 528.0
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 517.9
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 516.1
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 496.7
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 496.4
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 486.7
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 484.8
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 476.8
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 474.9
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 469.2
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 456.6
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 448.7
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 447.0
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 444.3
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 443.9
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 437.3
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 427.2
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 426.9
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 418.1
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 416.0
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 413.6
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 413.2
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 406.8
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 406.0
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 403.7
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 396.6
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 392.1
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 391.5
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 391.2
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 388.9
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 388.3
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 387.0
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 385.6
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 383.0
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 382.6
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 382.3
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 380.8
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 377.4
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 376.4
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 371.5
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 370.9
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 370.5
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 369.7
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 369.5
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 367.4
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 366.9
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 365.0
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 364.8
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 364.7
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 362.4
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 361.3
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 358.6
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 356.7
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 354.8
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 354.2
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 353.7
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 351.3
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 351.1
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 350.5
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 350.4
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 350.1
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 349.7
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 348.8
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 347.9
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 347.8
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 347.3
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 346.7
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 344.2
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 342.0
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 340.2
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 339.7
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 338.8
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 338.5
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 337.6
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 336.4
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 334.9
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 334.3
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 333.8
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 333.5
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 331.0
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 330.7
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 330.2
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 328.0
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 327.7
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 327.4
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 327.0
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 326.1
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 324.5
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 323.0
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 321.5
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 320.7
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 319.8
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 319.3
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 318.9
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 318.8
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 318.6
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 318.1
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 317.7
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 316.7
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 316.0
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 315.4
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 315.3
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 313.9
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 312.7
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 312.6
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 312.4
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 312.3
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 310.7
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 307.5
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 305.9
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 305.7
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 304.6
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 304.5
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 304.4
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 303.5
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 302.8
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 302.5
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 302.1
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 301.7
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 301.3
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 299.9
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 299.7
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 296.6
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 295.7
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 294.8
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 294.6
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 294.3
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 294.2
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 292.9
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 290.1
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 289.9
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 288.5
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 288.4
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 287.7
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 287.6
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 286.5
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 285.8
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 285.3
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 283.1
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 282.6
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 282.1
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 281.5
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 281.1
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 280.8
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 279.5
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 278.3
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 275.7
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 275.5
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 273.9
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 273.7
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 273.1
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 269.6
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 268.4
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 267.9
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 267.7
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 267.3
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 266.6
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 266.6
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 265.9
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 264.4
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 263.0
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 262.0
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 261.3
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 259.6
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 257.3
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 257.1
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 256.4
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 254.4
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 254.3
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 253.9
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 253.4
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 253.2
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 252.7
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 251.3
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 249.1
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 247.6
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 247.3
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 246.9
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 246.5
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 245.9
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 244.5
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 242.7
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 240.0
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 239.5
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 239.2
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 239.1
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 237.7
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 237.3
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 233.6
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 230.7
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 230.3
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 228.7
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 228.6
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 228.6
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 226.3
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 225.5
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 224.5
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 222.6
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 221.5
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 221.4
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 219.0
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 217.0
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 217.0
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 216.0
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 215.8
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 214.3
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 213.3
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 212.7
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 210.9
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 210.6
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 209.5
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 209.2
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 209.1
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 208.4
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 208.2
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 206.2
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 201.6
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 199.2
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 198.8
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 197.2
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 195.3
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 193.6
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 191.5
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 191.1
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 189.1
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 188.5
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 187.1
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 187.0
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 176.1
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 175.2
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 173.2
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 170.2
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 167.7
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 165.9
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 162.7
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 161.7
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 159.1
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 148.8
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 148.7
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 148.2
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 143.3
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 142.7
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Brain - Putamen (basal ganglia)
Average nTPM: 271.3
Samples: 205

Max nTPM: 524.9
Min nTPM: 120.7
Std nTPM: 80.4
Median nTPM: 255.2
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 524.9
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 522.7
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 506.3
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 491.1
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 471.7
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 470.9
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 458.4
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 456.9
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 452.5
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 443.1
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 434.7
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 432.5
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 407.2
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 403.3
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 401.0
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 399.1
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 396.2
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 394.8
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 390.4
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 389.7
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 387.1
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 387.0
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 385.8
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 379.7
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 369.5
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 366.1
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 365.5
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 360.1
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 359.0
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 358.9
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 357.6
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 352.3
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 351.8
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 349.6
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 346.6
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 344.4
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 341.4
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 338.4
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 337.8
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 335.5
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 333.2
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 332.2
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 329.5
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 327.7
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 326.1
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 324.7
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 322.2
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 319.0
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 318.8
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 318.4
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 317.9
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 314.0
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 313.0
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 311.5
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 310.0
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 305.1
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 303.8
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 303.7
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 303.5
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 303.4
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 303.3
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 303.0
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 301.0
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 298.8
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 297.4
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 295.5
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 295.3
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 294.9
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 293.8
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 289.9
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 289.7
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 289.2
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 288.2
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 287.0
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 283.4
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 282.9
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 282.8
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 281.7
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 280.7
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 280.3
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 280.3
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 280.0
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 276.8
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 274.7
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 274.5
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 272.0
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 270.7
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 269.6
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 268.7
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 268.5
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 268.2
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 267.4
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 266.9
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 265.9
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 264.1
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 262.8
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 262.2
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 259.1
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 259.1
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 258.4
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 256.8
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 255.5
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 255.2
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 254.7
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 254.2
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 253.9
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 253.3
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 253.0
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 253.0
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 252.9
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 251.6
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 250.1
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 250.0
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 249.2
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 248.8
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 248.1
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 244.2
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 243.6
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 242.5
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 242.0
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 242.0
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 241.6
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 241.4
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 240.3
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 239.0
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 236.5
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 236.3
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 235.6
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 233.8
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 232.8
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 232.4
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 231.4
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 230.5
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 230.2
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 229.6
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 227.7
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 227.4
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 225.7
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 223.8
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 223.2
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 220.3
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 219.4
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 218.9
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 218.4
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 217.1
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 215.3
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 214.9
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 214.4
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 212.6
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 212.5
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 211.9
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 210.7
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 210.3
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 208.2
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 206.3
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 205.8
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 205.0
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 204.4
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 204.3
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 204.0
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 203.3
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 202.3
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 201.3
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 199.9
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 199.7
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 198.9
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 197.7
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 197.7
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 196.5
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 196.2
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 195.9
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 195.9
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 195.2
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 195.0
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 194.7
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 194.4
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 193.6
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 191.3
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 191.2
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 191.1
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 190.7
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 190.3
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 189.8
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 186.0
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 184.2
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 183.1
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 180.0
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 179.1
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 178.9
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 174.7
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 174.1
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 173.4
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 172.6
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 168.3
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 167.4
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 166.6
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 163.6
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 162.8
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 162.0
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 161.0
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 156.8
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 149.8
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 145.1
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 143.6
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 120.7
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

360.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 299.1
FF:10164-103B2 76 years, female 299.1
Nucleus accumbens
Scaled Tags Per Million: 177.6
FF:10037-101F1 23-56 years, mixed 177.6
Putamen
Scaled Tags Per Million: 360.5
FF:10176-103C5 60 years, female 360.5
Globus pallidus
Scaled Tags Per Million: 267.7
FF:10175-103C4 60 years, female 311.5
FF:10161-103A8 76 years, female 223.9

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

993.3
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 912.5
Samples: 4

Max nTPM: 989.6
Min nTPM: 844.9
Sample A Male 844.9
Sample B Male 849.4
Sample C Female 966.1
Sample D Female 989.6
Septum
nTPM: 993.3
Samples: 4

Max nTPM: 1120.7
Min nTPM: 844.1
Sample A Male 844.1
Sample B Male 1120.7
Sample C Female 1111.1
Sample D Female 897.1
Ventral forebrain
nTPM: 936.5
Samples: 4

Max nTPM: 1094.6
Min nTPM: 853.9
Sample A Male 853.9
Sample B Male 881.1
Sample C Female 1094.6
Sample D Female 916.3

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

2.9
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 1.3
77340502 Antisense, RP_070116_02_D11, Mouse strain C57BL/6J (56 days, male) 1.5
71763912 Antisense, RP_050921_02_H02, Mouse strain C57BL/6J (56 days, male) 1.1
Pallidum
Expression energy: 2.9
77340502 Antisense, RP_070116_02_D11, Mouse strain C57BL/6J (56 days, male) 3.6
71763912 Antisense, RP_050921_02_H02, Mouse strain C57BL/6J (56 days, male) 2.1

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