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TISSUE PRIMARY DATA BASAL GANGLIA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:528.8 nTPM
HPA Brain:328.1 nTPM
GTEx:528.8 nTPM
FANTOM5:324.3 Scaled Tags Per Million
Pig:720.5 nTPM
Mouse:1039.3 nTPM
Allen mouse:4.2 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA055942
Glial cells Not detected
Neuronal cells Not detected


BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

328.1
Sample id Sample description nTPM
Caudate nucleus
nTPM: 300.9
2481 Female, age 94, left hemisphere 371.7
1857 Female, age 85, left hemisphere 331.9
1781 Male, age 74, unknown 320.0
1854 Male, age 80, left hemisphere 305.9
2290 Female, age 72, unknown 288.9
2288 Male, age 75, left hemisphere 284.8
2846 Female, age 79, unknown 262.1
2289 Male, age 61, right hemisphere 241.9
Globus pallidus, externus
nTPM: 328.1
2772 Female, age 79, unknown 420.9
1996 Male, age 80, right hemisphere 407.7
2395 Male, age 75, both hemispheres 293.7
2646 Male, age 61, right hemisphere 289.7
2567 Female, age 72, unknown 228.6
Globus pallidus, internus
nTPM: 309.2
2483 Female, age 94, right hemisphere 409.0
2287 Male, age 75, right hemisphere 350.4
1818 Male, age 74, unknown 345.8
2037 Male, age 80, right hemisphere 340.7
2778 Female, age 91, both hemispheres 302.1
2566 Female, age 72, unknown 224.7
2111 Female, age 85, right hemisphere 191.8
Nucleus accumbens
nTPM: 303.1
2286 Male, age 75, left hemisphere 366.4
1783 Male, age 74, unknown 343.9
1806 Female, age 85, left hemisphere 343.7
1856 Female, age 91, right hemisphere 323.1
2824 Male, age 61, right hemisphere 304.2
2698 Female, age 72, unknown 257.6
2732 Male, age 80, right hemisphere 243.3
2391 Female, age 94, left hemisphere 242.3
Nucleus basalis of Meynert
nTPM: 281.2
2569 Male, age 61, both hemispheres 324.1
2484 Female, age 94, left hemisphere 296.3
2821 Male, age 75, both hemispheres 258.4
2393 Male, age 80, right hemisphere 246.1
Nucleus of the diagonal band
nTPM: 274.1
1812 Female, age 91, both hemispheres 340.4
2775 Male, age 80, right hemisphere 312.6
2029 Male, age 61, right hemisphere 247.6
1979 Male, age 74, unknown 236.4
2195 Female, age 85, both hemispheres 233.6
Putamen
nTPM: 271.4
2466 Female, age 79, unknown 315.7
2482 Female, age 94, left hemisphere 310.7
1838 Male, age 80, right hemisphere 305.4
1937 Female, age 91, right hemisphere 293.6
1829 Male, age 74, unknown 242.1
2647 Male, age 75, left hemisphere 242.0
2489 Female, age 72, unknown 189.9
Septal nuclei
nTPM: 256.3
2031 Female, age 72, unknown 320.2
1960 Male, age 74, unknown 302.5
2009 Female, age 91, both hemispheres 265.8
2059 Female, age 85, both hemispheres 254.6
2199 Male, age 80, right hemisphere 251.0
2394 Male, age 61, left hemisphere 210.4
2629 Female, age 94, right hemisphere 189.4
Stria terminalis, bed nucleus
nTPM: 221.9
1974 Female, age 91, both hemispheres 280.5
2486 Female, age 94, both hemispheres 206.4
2201 Male, age 74, unknown 178.6

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

528.8
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 475.1
Samples: 246

Max nTPM: 1180.5
Min nTPM: 236.1
Std nTPM: 126.2
Median nTPM: 461.8
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 1180.5
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 1118.5
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 927.1
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 882.2
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 871.9
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 857.4
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 771.8
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 731.3
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 719.9
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 702.1
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 694.1
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 681.4
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 677.5
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 675.3
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 665.5
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 663.7
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 659.0
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 653.2
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 641.8
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 635.3
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 635.1
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 617.9
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 605.1
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 599.1
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 597.5
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 596.0
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 593.3
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 590.6
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 589.6
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 587.0
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 586.8
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 586.6
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 586.4
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 585.7
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 583.6
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 583.0
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 582.2
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 581.9
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 581.6
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 572.8
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 572.0
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 571.2
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 568.3
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 568.3
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 568.0
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 566.4
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 560.4
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 557.1
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 555.8
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 555.5
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 552.3
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 551.2
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 542.7
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 542.7
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 539.6
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 539.2
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 538.5
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 536.4
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 535.2
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 533.0
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 531.0
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 531.0
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 526.9
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 525.1
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 520.2
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 517.0
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 515.9
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 514.5
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 513.8
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 512.8
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 511.4
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 506.7
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 506.7
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 505.4
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 504.1
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 503.9
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 501.7
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 500.9
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 499.9
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 499.2
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 497.9
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 495.4
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 491.6
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 491.3
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 491.1
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 490.5
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 489.8
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 489.3
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 489.0
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 488.9
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 488.3
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 488.3
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 487.6
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 486.0
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 485.7
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 485.0
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 483.5
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 482.6
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 481.9
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 480.6
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 480.1
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 480.1
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 477.6
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 476.4
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 475.1
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 474.7
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 473.5
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 473.1
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 473.0
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 471.7
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 471.3
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 471.2
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 470.7
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 470.5
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 470.0
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 469.2
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 468.7
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 468.2
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 467.8
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 467.0
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 465.7
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 464.7
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 462.0
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 461.5
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 460.8
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 460.5
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 459.6
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 458.5
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 457.0
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 456.3
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 456.2
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 454.8
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 453.0
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 452.5
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 452.2
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 450.2
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 448.1
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 447.0
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 446.5
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 446.4
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 446.2
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 446.0
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 445.2
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 444.6
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 444.0
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 443.8
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 441.2
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 438.4
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 437.8
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 435.6
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 434.4
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 434.3
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 433.6
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 433.2
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 429.4
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 429.0
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 428.3
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 427.2
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 425.2
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 424.3
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 423.0
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 420.9
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 419.8
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 416.1
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 413.2
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 412.4
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 412.2
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 412.0
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 411.9
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 411.6
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 411.6
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 410.5
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 409.8
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 409.5
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 405.4
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 404.6
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 403.9
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 402.4
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 400.4
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 399.8
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 399.8
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 399.1
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 397.5
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 396.6
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 396.4
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 395.9
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 395.9
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 394.3
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 392.5
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 391.3
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 387.6
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 387.3
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 386.8
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 386.2
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 382.7
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 380.7
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 379.6
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 378.0
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 377.7
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 374.5
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 373.9
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 372.6
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 372.4
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 370.4
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 370.0
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 369.7
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 368.7
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 367.6
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 367.1
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 363.1
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 363.1
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 362.7
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 361.0
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 360.7
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 360.3
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 358.8
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 356.9
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 355.5
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 351.8
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 347.7
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 347.2
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 346.5
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 341.7
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 341.2
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 340.9
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 337.6
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 332.4
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 324.3
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 321.2
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 318.5
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 317.5
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 316.6
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 311.2
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 309.3
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 305.6
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 305.5
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 300.4
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 299.6
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 298.9
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 295.2
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 283.7
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 282.4
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 279.2
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 278.5
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 237.4
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 236.1
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 507.8
Samples: 246

Max nTPM: 1481.8
Min nTPM: 239.4
Std nTPM: 133.9
Median nTPM: 479.1
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 1481.8
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 1177.2
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 920.7
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 840.2
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 792.5
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 786.1
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 772.9
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 754.0
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 751.3
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 719.4
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 717.4
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 710.2
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 709.5
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 709.4
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 703.0
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 683.8
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 681.7
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 680.7
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 676.7
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 666.7
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 662.9
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 662.5
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 658.6
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 658.6
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 656.4
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 655.0
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 654.2
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 652.8
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 651.0
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 649.6
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 648.3
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 643.3
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 643.1
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 639.1
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 638.8
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 637.3
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 635.2
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 616.5
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 613.0
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 612.8
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 612.1
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 611.4
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 606.2
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 605.4
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 604.7
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 604.6
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 603.8
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 603.7
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 601.6
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 599.8
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 597.6
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 595.0
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 594.5
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 593.2
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 592.9
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 587.9
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 587.8
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 587.3
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 581.7
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 576.5
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 570.2
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 568.3
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 566.8
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 566.7
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 564.6
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 564.0
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 561.8
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 559.8
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 558.1
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 556.8
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 556.7
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 556.5
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 554.9
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 554.5
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 551.7
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 548.3
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 545.6
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 544.4
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 541.8
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 539.3
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 536.7
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 536.1
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 534.1
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 533.1
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 531.5
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 530.4
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 528.9
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 528.5
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 525.5
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 522.2
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 520.2
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 519.9
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 519.1
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 518.6
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 517.3
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 516.6
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 515.3
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 515.1
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 514.3
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 513.8
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 512.7
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 509.6
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 509.4
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 508.1
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 507.2
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 507.1
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 505.8
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 505.0
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 504.6
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 502.9
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 502.1
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 494.6
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 493.5
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 490.7
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 488.0
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 487.1
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 486.4
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 484.6
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 484.5
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 484.2
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 483.5
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 481.6
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 481.1
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 477.2
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 476.6
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 476.5
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 476.5
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 475.7
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 475.6
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 475.1
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 474.2
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 472.6
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 472.3
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 471.8
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 470.4
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 470.0
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 470.0
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 468.6
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 467.3
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 467.1
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 466.2
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 466.1
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 465.5
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 465.3
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 464.9
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 464.5
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 463.9
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 463.0
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 462.3
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 461.1
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 460.0
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 460.0
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 459.8
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 459.4
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 459.2
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 459.0
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 458.7
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 454.2
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 454.1
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 453.6
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 453.5
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 452.3
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 451.5
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 451.2
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 449.4
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 445.0
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 443.8
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 443.2
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 443.0
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 441.7
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 441.0
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 440.6
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 439.6
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 437.5
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 436.5
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 435.6
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 435.1
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 434.2
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 433.9
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 433.6
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 432.4
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 431.6
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 428.8
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 426.8
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 426.2
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 423.1
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 423.1
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 422.7
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 422.5
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 421.9
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 421.1
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 421.1
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 420.2
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 418.6
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 418.3
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 418.0
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 417.7
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 417.2
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 416.7
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 416.1
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 416.0
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 413.0
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 410.7
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 409.9
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 408.5
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 405.8
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 404.5
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 400.5
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 399.3
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 394.7
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 394.3
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 392.8
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 392.2
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 392.0
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 390.7
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 390.1
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 387.5
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 387.0
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 386.6
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 385.0
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 384.0
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 381.4
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 380.9
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 379.3
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 375.9
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 374.0
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 371.1
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 368.9
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 366.8
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 351.6
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 335.9
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 335.7
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 335.4
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 334.6
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 330.4
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 323.8
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 321.4
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 319.2
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 317.3
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 314.3
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 292.2
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 289.4
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 283.7
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 273.9
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 240.8
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 239.4
Show allShow less
Brain - Putamen (basal ganglia)
Average nTPM: 528.8
Samples: 205

Max nTPM: 1156.0
Min nTPM: 251.0
Std nTPM: 111.8
Median nTPM: 517.7
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 1156.0
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 907.0
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 837.1
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 820.6
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 782.8
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 769.7
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 749.4
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 744.4
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 736.7
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 735.8
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 720.1
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 713.9
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 712.0
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 708.1
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 697.9
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 691.0
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 685.6
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 680.3
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 676.5
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 670.4
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 653.0
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 651.9
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 650.8
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 639.4
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 635.0
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 634.2
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 633.0
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 632.3
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 632.3
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 627.6
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 624.2
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 621.6
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 617.0
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 616.8
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 615.9
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 614.8
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 610.3
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 604.9
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 603.2
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 603.0
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 602.8
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 599.3
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 598.3
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 595.3
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 594.5
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 588.6
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 587.3
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 586.7
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 585.9
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 585.9
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 584.0
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 583.2
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 578.2
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 573.4
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 572.4
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 572.1
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 571.4
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 569.7
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 567.8
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 567.1
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 566.9
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 566.8
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 566.5
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 564.9
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 564.0
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 564.0
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 563.7
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 563.2
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 562.4
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 561.3
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 561.1
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 560.5
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 559.4
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 558.9
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 558.1
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 555.8
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 552.8
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 551.4
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 550.8
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 550.0
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 549.5
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 547.9
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 545.4
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 544.3
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 543.4
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 542.2
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 541.4
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 540.5
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 539.2
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 532.3
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 527.4
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 524.6
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 524.5
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 523.1
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 522.7
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 521.5
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 521.4
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 520.9
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 519.5
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 519.3
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 518.8
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 517.7
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 517.7
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 517.7
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 515.6
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 514.7
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 514.5
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 513.2
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 512.0
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 510.9
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 509.6
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 508.8
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 508.3
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 508.0
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 507.1
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 506.5
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 505.0
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 503.6
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 502.3
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 501.0
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 498.8
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 498.5
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 497.9
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 495.9
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 493.2
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 491.6
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 489.7
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 489.5
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 488.4
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 486.7
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 486.5
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 483.9
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 483.7
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 479.7
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 479.3
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 478.6
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 478.0
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 477.8
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 477.6
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 475.9
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 475.6
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 475.5
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 475.1
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 473.2
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 473.1
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 470.7
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 468.3
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 468.0
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 465.0
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 464.9
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 464.7
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 463.5
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 462.3
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 460.9
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 459.0
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 458.4
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 458.0
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 456.2
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 455.2
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 453.8
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 453.5
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 449.1
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 448.3
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 446.2
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 443.0
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 442.3
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 441.4
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 433.2
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 432.6
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 432.1
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 431.9
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 430.5
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 430.1
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 429.3
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 428.2
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 424.3
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 421.0
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 417.5
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 417.3
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 412.6
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 411.9
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 407.3
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 406.0
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 404.8
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 404.5
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 401.3
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 399.9
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 399.7
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 396.5
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 396.3
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 393.8
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 393.5
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 390.9
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 389.8
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 389.2
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 381.1
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 379.9
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 378.5
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 358.7
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 330.3
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 324.2
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 315.0
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 292.9
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 271.9
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 251.0
Show allShow less

BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

324.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 238.5
FF:10164-103B2 76 years, female 238.5
Nucleus accumbens
Scaled Tags Per Million: 180.2
FF:10037-101F1 23-56 years, mixed 180.2
Putamen
Scaled Tags Per Million: 324.3
FF:10176-103C5 60 years, female 324.3
Globus pallidus
Scaled Tags Per Million: 295.1
FF:10175-103C4 60 years, female 375.1
FF:10161-103A8 76 years, female 215.1

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

720.5
Pig sample Sample description nTPM
Caudate
nTPM: 679.3
Samples: 4

Max nTPM: 799.4
Min nTPM: 587.4
Sample A Female 591.5
Sample B Female 738.7
Sample C Male 799.4
Sample D Male 587.4
Putamen
nTPM: 720.5
Samples: 4

Max nTPM: 1006.6
Min nTPM: 596.9
Sample A Female 611.9
Sample B Female 596.9
Sample C Male 1006.6
Sample D Male 666.7
Septum
nTPM: 569.3
Samples: 4

Max nTPM: 683.5
Min nTPM: 469.4
Sample A Female 683.5
Sample B Female 577.6
Sample C Male 469.4
Sample D Male 546.8
Ventral pallidum
nTPM: 593.1
Samples: 4

Max nTPM: 710.7
Min nTPM: 513.9
Sample A Female 606.0
Sample B Female 710.7
Sample C Male 541.7
Sample D Male 513.9

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1039.3
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 959.0
Samples: 4

Max nTPM: 1223.4
Min nTPM: 799.4
Sample A Male 931.6
Sample B Male 1223.4
Sample C Female 799.4
Sample D Female 881.5
Septum
nTPM: 1008.7
Samples: 4

Max nTPM: 1182.6
Min nTPM: 802.4
Sample A Male 881.7
Sample B Male 1168.2
Sample C Female 1182.6
Sample D Female 802.4
Ventral forebrain
nTPM: 1039.3
Samples: 4

Max nTPM: 1360.9
Min nTPM: 858.8
Sample A Male 1062.6
Sample B Male 858.8
Sample C Female 1360.9
Sample D Female 874.8

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

4.2
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 4.2
69568986 Antisense, RP_050426_03_C02, Mouse strain C57BL/6J (56 days, male) 4.2
Pallidum
Expression energy: 4.1
69568986 Antisense, RP_050426_03_C02, Mouse strain C57BL/6J (56 days, male) 4.1

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