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BRAIN MEDULLA OBLONGATA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Medulla oblongata
MEDULLA OBLONGATA - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
HPA Brain:127.6 nTPM
FANTOM5:31.1 Scaled Tags Per Million
Allen mouse:1.7 Expression energy

MEDULLA OBLONGATA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

127.6
Sample id Sample description nTPM
Area postrema
nTPM: 68.3
2306 Male, age 80, both hemispheres 101.5
2799 Male, age 61, both hemispheres 51.9
2054 Male, age 76, both hemispheres 51.5
Dorsal medullary reticular nucleus
nTPM: 109.2
2373 Male, age 61, both hemispheres 132.0
2088 Male, age 76, both hemispheres 102.3
2040 Female, age 85, both hemispheres 93.3
Dorsal motor vagal complex
nTPM: 76.7
2185 Male, age 76, both hemispheres 125.0
2000 Male, age 74, unknown 88.4
2643 Male, age 74, both hemispheres 81.3
2797 Male, age 61, both hemispheres 80.2
2133 Female, age 91, both hemispheres 63.9
2807 Female, age 85, both hemispheres 62.4
2844 Male, age 55, unknown 59.7
2813 Female, age 72, unknown 52.8
Gigantocellular reticular nuclei, medullary
nTPM: 90.8
2314 Male, age 61, both hemispheres 144.3
2022 Male, age 76, right hemisphere 97.7
2387 Female, age 91, both hemispheres 93.0
1876 Female, age 85, both hemispheres 92.1
2310 Male, age 80, both hemispheres 77.4
2462 Male, age 74, both hemispheres 40.5
Gigantocellular reticular nuclei, pars
nTPM: 88.2
2336 Male, age 61, both hemispheres 123.2
2330 Male, age 80, both hemispheres 84.6
2084 Female, age 85, both hemispheres 83.9
2706 Male, age 80, both hemispheres 76.2
2168 Male, age 76, both hemispheres 72.9
Inferior olive
nTPM: 98.1
2178 Male, age 61, both hemispheres 128.1
2628 Female, age 91, both hemispheres 104.8
2085 Female, age 85, both hemispheres 92.9
2563 Male, age 74, both hemispheres 88.7
2379 Male, age 80, both hemispheres 75.7
Lateral medullary reticular nucleus
nTPM: 104.2
2852 Male, age 80, both hemispheres 149.0
2374 Male, age 61, both hemispheres 113.6
2044 Male, age 76, both hemispheres 100.3
2305 Male, age 74, both hemispheres 97.9
2190 Female, age 85, both hemispheres 91.8
2804 Female, age 91, both hemispheres 72.4
Medial olivary nucleus
nTPM: 97.6
1943 Male, age 61, both hemispheres 157.7
2851 Male, age 80, both hemispheres 89.9
1962 Male, age 76, both hemispheres 86.4
2138 Female, age 91, both hemispheres 56.3
Medial vestibular nucleus
nTPM: 75.9
2624 Male, age 61, both hemispheres 99.8
2803 Female, age 91, both hemispheres 90.3
2093 Male, age 80, both hemispheres 85.8
2801 Male, age 74, both hemispheres 75.7
2743 Female, age 85, both hemispheres 59.2
2134 Male, age 76, both hemispheres 44.6
Motor hypoglossal nucleus
nTPM: 89.6
2182 Male, age 80, both hemispheres 136.9
2132 Female, age 85, both hemispheres 103.1
2125 Female, age 91, both hemispheres 100.0
2277 Male, age 76, both hemispheres 54.2
2461 Male, age 61, both hemispheres 53.9
Nucleus ambiguus
nTPM: 127.6
2071 Male, age 76, both hemispheres 130.1
2096 Female, age 85, both hemispheres 125.0
Nucleus cuneatus
nTPM: 99.3
2100 Male, age 76, both hemispheres 121.6
2562 Male, age 61, both hemispheres 110.0
2376 Male, age 61, both hemispheres 108.7
2805 Female, age 91, both hemispheres 101.3
2380 Male, age 80, both hemispheres 98.9
2564 Male, age 74, both hemispheres 92.5
2131 Male, age 76, both hemispheres 90.1
2381 Male, age 80, both hemispheres 89.5
2808 Female, age 85, both hemispheres 80.9
Nucleus gracilis
nTPM: 104.2
2382 Male, age 80, both hemispheres 121.1
2299 Female, age 85, both hemispheres 99.4
2627 Male, age 74, both hemispheres 92.1
Nucleus raphe obscurus
nTPM: 108.9
2800 Male, age 61, midline 112.3
2142 Male, age 76, midline 108.0
2845 Female, age 85, midline 106.4
Nucleus raphe pallidus
nTPM: 91.7
2145 Male, age 76, midline 103.0
1924 Male, age 61, midline 87.0
2183 Male, age 80, midline 85.2
Nucleus tractus solitarii
nTPM: 48.0
2307 Male, age 80, both hemispheres 63.9
2656 Male, age 76, both hemispheres 57.7
2191 Female, age 85, both hemispheres 46.5
2144 Female, age 91, right hemisphere 23.9
Parvicellular reticular nuclei
nTPM: 76.8
2119 Male, age 80, both hemispheres 81.7
2095 Male, age 76, both hemispheres 80.1
2558 Male, age 74, both hemispheres 68.7
Parvicellular reticular nuclei, medullary
nTPM: 79.4
2189 Female, age 91, both hemispheres 90.6
2181 Male, age 80, left hemisphere 74.8
2091 Female, age 85, both hemispheres 72.9
Peritrigeminal nucleus
nTPM: 85.0
2179 Male, age 61, both hemispheres 94.6
2067 Female, age 85, both hemispheres 80.8
2136 Male, age 76, both hemispheres 79.5
Prepositus hypoglossal nucleus
nTPM: 63.1
2855 Female, age 85, right hemisphere 66.8
2086 Male, age 80, both hemispheres 59.4
Spinal trigeminal nucleus, caudal
nTPM: 109.1
2312 Male, age 61, both hemispheres 148.0
2308 Male, age 80, both hemispheres 112.6
2447 Male, age 76, both hemispheres 112.5
2390 Female, age 91, both hemispheres 86.7
2642 Male, age 74, both hemispheres 85.6
Spinal trigeminal nucleus, interpolar
nTPM: 72.3
2389 Female, age 91, both hemispheres 89.7
2033 Male, age 80, both hemispheres 86.5
2625 Male, age 61, both hemispheres 72.7
2386 Female, age 85, both hemispheres 69.9
2066 Male, age 76, right hemisphere 42.6
Spinal vestibular nucleus
nTPM: 103.9
2748 Male, age 76, both hemispheres 140.5
2384 Male, age 74, both hemispheres 107.4
2780 Male, age 80, both hemispheres 105.6
2186 Female, age 91, both hemispheres 98.1
2806 Female, age 85, both hemispheres 87.2
2796 Male, age 61, both hemispheres 84.8
Superior vestibular nucleus
nTPM: 66.3
2015 Male, age 80, both hemispheres 80.2
2061 Male, age 76, both hemispheres 70.6
2383 Male, age 74, both hemispheres 48.1
Ventral medullary reticular nucleus
nTPM: 124.2
2060 Male, age 76, both hemispheres 131.9
2372 Male, age 61, both hemispheres 116.4
Ventrolateral medulla, A1-C1 cell groups
nTPM: 92.2
2180 Male, age 61, both hemispheres 109.9
2118 Male, age 80, both hemispheres 105.2
2302 Female, age 91, both hemispheres 85.9
1986 Male, age 76, both hemispheres 82.2
2741 Female, age 85, both hemispheres 77.5

MEDULLA OBLONGATA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

31.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Medulla oblongata
Scaled Tags Per Million: 31.1
FF:10038-101F2 18-64 years, mixed 49.7
FF:10174-103C3 60 years, female 23.7
FF:10155-103A2 76 years, female 20.0

MEDULLA OBLONGATA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

1.7
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 1.7
69447782 Antisense, RP_050419_02_A12, Mouse strain C57BL/6J (56 days, male) 1.7

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