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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:240.1 nTPM
HPA Brain:184.9 nTPM
GTEx:240.1 nTPM
FANTOM5:254.6 Scaled Tags Per Million
Pig:127.1 nTPM
Mouse:443.5 nTPM
Allen mouse:7.9 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA027526
Glial cells Not detected
Neuronal cells Medium



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

184.9
Sample id Sample description nTPM
Caudate nucleus
nTPM: 184.9
2481 Female, age 94, left hemisphere 225.2
2846 Female, age 79, unknown 197.7
2288 Male, age 75, left hemisphere 196.6
1781 Male, age 74, unknown 187.4
1857 Female, age 85, left hemisphere 183.8
1854 Male, age 80, left hemisphere 176.1
2290 Female, age 72, unknown 171.5
2289 Male, age 61, right hemisphere 141.0
Globus pallidus, externus
nTPM: 180.2
2772 Female, age 79, unknown 258.9
1996 Male, age 80, right hemisphere 208.3
2395 Male, age 75, both hemispheres 160.8
2646 Male, age 61, right hemisphere 151.1
2567 Female, age 72, unknown 121.8
Globus pallidus, internus
nTPM: 177.3
2287 Male, age 75, right hemisphere 229.5
1818 Male, age 74, unknown 217.0
2483 Female, age 94, right hemisphere 203.5
2037 Male, age 80, right hemisphere 186.7
2778 Female, age 91, both hemispheres 160.7
2566 Female, age 72, unknown 134.0
2111 Female, age 85, right hemisphere 109.5
Nucleus accumbens
nTPM: 178.5
1856 Female, age 91, right hemisphere 241.4
2286 Male, age 75, left hemisphere 205.3
2698 Female, age 72, unknown 180.3
1806 Female, age 85, left hemisphere 177.1
2391 Female, age 94, left hemisphere 173.6
2824 Male, age 61, right hemisphere 168.5
1783 Male, age 74, unknown 165.7
2732 Male, age 80, right hemisphere 115.8
Nucleus basalis of Meynert
nTPM: 170.7
2484 Female, age 94, left hemisphere 184.4
2393 Male, age 80, right hemisphere 172.6
2821 Male, age 75, both hemispheres 166.5
2569 Male, age 61, both hemispheres 159.2
Nucleus of the diagonal band
nTPM: 183.2
1812 Female, age 91, both hemispheres 202.7
2029 Male, age 61, right hemisphere 197.6
2775 Male, age 80, right hemisphere 191.4
2195 Female, age 85, both hemispheres 182.8
1979 Male, age 74, unknown 141.4
Putamen
nTPM: 178.8
2466 Female, age 79, unknown 200.3
2482 Female, age 94, left hemisphere 195.4
1937 Female, age 91, right hemisphere 191.9
1838 Male, age 80, right hemisphere 187.2
1829 Male, age 74, unknown 179.9
2647 Male, age 75, left hemisphere 164.4
2489 Female, age 72, unknown 132.7
Septal nuclei
nTPM: 169.9
2031 Female, age 72, unknown 216.7
1960 Male, age 74, unknown 211.8
2009 Female, age 91, both hemispheres 186.9
2629 Female, age 94, right hemisphere 156.8
2059 Female, age 85, both hemispheres 149.2
2199 Male, age 80, right hemisphere 140.7
2394 Male, age 61, left hemisphere 127.2
Stria terminalis, bed nucleus
nTPM: 165.1
1974 Female, age 91, both hemispheres 205.1
2486 Female, age 94, both hemispheres 145.7
2201 Male, age 74, unknown 144.6

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

240.1
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 221.7
Samples: 246

Max nTPM: 473.1
Min nTPM: 112.1
Std nTPM: 65.4
Median nTPM: 211.0
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 473.1
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 466.4
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 454.1
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 447.4
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 438.7
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 431.7
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 428.7
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 395.3
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 377.4
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 375.0
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 367.9
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 355.7
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 349.1
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 330.0
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 326.7
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 326.5
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 326.4
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 321.6
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 303.4
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 302.2
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 301.9
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 301.3
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 297.2
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 296.0
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 295.7
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 294.7
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 292.5
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 289.8
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 289.8
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 288.8
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 286.4
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 286.2
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 283.5
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 281.6
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 279.0
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 277.4
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 277.2
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 275.9
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 275.6
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 272.6
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 271.4
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 270.4
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 268.5
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 267.5
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 267.3
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 266.2
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 266.1
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 266.0
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 263.5
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 261.7
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 258.9
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 258.7
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 258.1
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 256.2
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 256.0
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 255.2
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 254.1
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 253.9
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 253.8
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 252.8
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 251.4
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 251.0
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 250.9
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 249.4
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 248.8
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 248.7
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 247.2
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 245.6
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 245.1
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 244.7
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 244.5
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 243.2
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 242.8
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 242.3
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 241.2
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 241.0
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 240.9
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 240.6
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 240.4
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 240.2
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 239.6
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 238.7
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 238.5
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 237.6
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 237.2
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 236.2
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 236.2
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 236.2
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 235.9
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 234.5
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 233.0
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 231.0
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 230.5
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 230.2
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 229.7
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 229.5
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 229.4
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 228.1
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 227.8
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 227.4
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 227.2
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 225.3
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 225.2
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 224.0
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 222.6
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 222.4
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 221.8
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 220.7
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 220.7
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 220.5
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 220.3
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 220.1
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 220.1
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 219.0
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 218.8
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 217.2
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 217.1
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 215.1
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 214.9
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 214.0
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 211.4
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 211.3
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 211.1
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 210.9
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 210.9
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 210.2
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 210.1
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 209.6
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 209.2
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 207.6
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 207.1
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 206.8
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 205.7
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 205.0
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 203.8
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 203.6
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 202.5
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 202.2
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 201.5
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 201.4
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 201.3
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 200.8
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 200.3
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 199.3
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 198.8
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 198.7
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 198.6
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 198.0
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 197.8
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 197.4
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 196.7
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 194.7
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 194.5
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 193.3
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 192.6
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 192.4
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 192.2
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 192.1
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 191.7
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 191.0
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 190.7
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 189.5
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 189.0
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 188.9
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 188.0
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 187.9
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 187.6
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 187.3
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 186.5
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 185.3
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 184.9
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 184.6
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 182.9
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 182.8
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 182.2
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 182.1
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 181.7
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 181.6
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 181.4
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 180.4
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 179.0
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 178.3
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 177.9
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 176.9
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 175.7
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 174.4
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 173.6
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 173.4
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 172.4
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 171.8
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 171.7
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 171.1
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 170.4
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 168.5
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 167.9
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 166.4
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 165.5
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 165.5
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 164.6
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 164.4
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 164.3
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 164.2
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 164.1
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 163.3
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 162.6
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 162.5
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 160.9
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 160.9
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 160.9
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 160.5
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 160.2
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 160.0
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 159.8
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 159.2
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 158.6
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 158.5
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 158.2
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 157.7
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 156.0
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 155.9
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 155.8
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 155.6
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 153.7
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 151.8
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 151.2
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 151.1
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 149.3
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 149.0
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 147.9
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 147.3
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 146.9
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 143.3
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 142.5
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 136.5
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 136.2
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 135.4
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 133.5
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 132.4
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 130.9
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 129.0
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 122.8
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 120.4
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 119.8
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 119.0
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 114.9
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 112.1
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 235.2
Samples: 246

Max nTPM: 446.0
Min nTPM: 127.1
Std nTPM: 57.3
Median nTPM: 227.2
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 446.0
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 398.4
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 393.5
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 386.3
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 382.5
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 379.8
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 378.3
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 376.8
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 370.3
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 364.4
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 353.5
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 351.1
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 350.9
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 340.8
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 339.7
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 331.3
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 331.2
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 329.7
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 320.6
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 320.0
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 318.9
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 314.0
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 313.5
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 311.7
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 308.2
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 308.2
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 307.2
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 306.8
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 305.0
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 300.5
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 300.0
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 297.9
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 296.8
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 294.2
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 292.0
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 291.0
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 291.0
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 289.4
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 288.5
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 287.9
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 286.9
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 286.8
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 284.8
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 284.3
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 284.2
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 283.7
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 283.5
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 283.0
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 280.1
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 279.5
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 279.4
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 279.2
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 279.1
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 278.7
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 277.0
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 275.4
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 274.4
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 273.8
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 273.4
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 272.5
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 271.0
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 266.2
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 265.3
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 264.4
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 263.1
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 262.8
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 262.5
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 260.7
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 259.9
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 259.8
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 259.6
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 259.3
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 258.9
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 258.3
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 257.9
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 256.7
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 255.9
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 255.9
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 255.4
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 255.1
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 254.3
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 253.3
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 253.2
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 250.7
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 250.2
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 249.4
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 248.9
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 248.2
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 245.7
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 245.5
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 245.1
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 244.5
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 243.9
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 243.0
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 243.0
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 242.9
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 242.1
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 241.0
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 239.9
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 239.8
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 239.5
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 239.0
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 237.8
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 236.7
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 236.4
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 235.7
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 235.4
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 235.4
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 235.4
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 234.0
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 233.8
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 232.6
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 232.6
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 232.4
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 232.1
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 231.4
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 230.6
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 229.8
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 229.7
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 229.1
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 228.9
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 228.7
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 227.5
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 226.8
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 225.2
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 225.1
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 225.1
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 225.0
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 224.7
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 224.4
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 222.1
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 221.4
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 220.5
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 220.5
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 219.8
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 219.8
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 219.6
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 219.4
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 219.3
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 219.1
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 218.6
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 218.5
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 218.4
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 218.0
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 217.4
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 217.3
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 217.2
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 215.9
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 215.7
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 215.4
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 214.0
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 213.8
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 213.8
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 213.6
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 212.2
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 211.6
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 211.2
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 210.8
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 210.5
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 209.9
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 209.5
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 208.8
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 208.7
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 208.4
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 207.7
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 207.2
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 206.4
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 204.5
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 203.8
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 203.5
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 203.1
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 201.6
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 201.3
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 200.9
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 200.6
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 200.1
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 200.1
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 199.8
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 198.6
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 198.2
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 197.7
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 197.7
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 196.0
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 195.6
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 194.8
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 194.3
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 194.2
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 192.0
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 191.4
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 191.3
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 190.9
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 190.7
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 190.5
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 189.8
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 189.7
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 189.0
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 188.6
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 187.5
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 186.2
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 185.8
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 185.5
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 185.1
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 184.2
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 183.1
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 183.0
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 182.9
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 182.8
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 182.3
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 182.2
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 178.6
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 178.1
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 176.9
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 176.5
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 175.9
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 174.9
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 174.7
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 173.1
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 172.0
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 171.4
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 170.1
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 169.3
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 168.9
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 168.8
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 167.6
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 167.5
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 165.3
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 163.2
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 162.9
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 157.1
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 156.4
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 154.2
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 153.3
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 153.1
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 152.2
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 152.2
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 146.8
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 146.1
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 144.2
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 141.4
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 140.0
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 138.3
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 136.7
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 134.8
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 134.3
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 132.8
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 127.1
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Brain - Putamen (basal ganglia)
Average nTPM: 240.1
Samples: 205

Max nTPM: 411.7
Min nTPM: 123.9
Std nTPM: 57.9
Median nTPM: 234.2
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 411.7
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 395.2
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 391.2
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 390.6
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 390.0
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 385.7
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 372.8
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 363.1
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 356.4
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 353.8
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 353.2
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 347.5
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 345.0
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 344.2
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 338.8
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 335.9
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 331.7
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 329.1
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 328.1
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 327.9
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 326.2
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 321.9
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 318.9
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 314.9
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 310.7
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 308.2
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 308.2
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 308.0
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 303.8
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 303.5
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 299.9
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 299.8
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 298.8
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 297.6
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 296.4
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 296.2
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 291.9
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 291.3
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 291.0
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 290.7
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 289.1
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 288.5
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 287.5
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 287.0
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 286.3
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 286.3
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 284.2
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 282.1
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 279.7
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 278.7
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 277.3
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 275.8
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 275.7
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 273.4
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 269.3
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 267.9
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 267.1
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 265.8
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 264.1
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 262.9
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 262.8
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 260.6
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 260.2
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 259.0
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 258.0
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 257.1
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 256.4
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 256.2
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 254.1
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 253.6
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 252.1
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 252.1
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 251.9
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 250.3
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 250.3
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 248.7
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 246.7
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 245.3
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 243.4
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 243.0
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 242.7
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 242.6
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 242.1
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 241.3
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 240.7
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 240.6
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 240.3
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 240.1
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 239.9
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 239.9
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 239.5
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 239.2
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 238.8
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 237.3
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 236.3
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 236.0
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 235.9
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 235.5
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 235.4
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 235.1
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 234.8
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 234.6
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 234.2
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 233.3
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 232.8
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 232.7
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 231.6
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 228.4
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 227.5
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 227.5
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 224.5
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 223.7
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 222.9
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 222.8
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 222.7
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 221.6
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 221.4
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 220.7
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 220.1
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 219.6
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 219.4
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 218.2
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 217.5
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 216.7
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 216.2
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 216.1
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 215.5
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 215.3
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 214.3
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 213.2
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 213.1
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 213.1
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 213.1
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 211.6
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 211.4
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 211.0
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 210.9
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 210.6
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 208.9
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 208.3
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 207.9
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 206.2
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 206.1
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 206.0
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 206.0
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 205.1
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 204.0
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 202.6
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 201.0
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 200.0
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 199.9
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 199.9
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 198.7
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 198.4
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 198.1
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 196.9
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 196.2
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 195.9
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 195.8
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 194.9
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 194.6
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 194.5
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 193.8
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 191.9
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 191.1
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 190.6
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 190.6
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 188.0
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 187.6
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 187.5
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 187.2
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 186.9
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 186.8
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 186.4
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 185.4
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 183.1
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 182.4
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 181.6
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 181.5
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 177.1
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 175.6
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 174.3
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 173.9
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 173.0
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 172.4
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 171.7
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 169.8
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 169.0
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 167.4
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 167.3
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 167.2
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 165.5
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 164.9
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 163.9
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 161.5
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 156.5
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 155.8
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 153.5
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 152.6
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 151.4
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 148.8
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 146.5
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 133.5
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 129.8
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 123.9
Show allShow less

BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

254.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 188.6
FF:10164-103B2 76 years, female 188.6
Nucleus accumbens
Scaled Tags Per Million: 210.3
FF:10037-101F1 23-56 years, mixed 210.3
Putamen
Scaled Tags Per Million: 241.5
FF:10176-103C5 60 years, female 241.5
Globus pallidus
Scaled Tags Per Million: 254.6
FF:10175-103C4 60 years, female 361.7
FF:10161-103A8 76 years, female 147.5

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

127.1
Pig sample Sample description nTPM
Caudate
nTPM: 103.1
Samples: 4

Max nTPM: 133.2
Min nTPM: 86.9
Sample A Female 92.9
Sample B Female 99.3
Sample C Male 133.2
Sample D Male 86.9
Putamen
nTPM: 127.2
Samples: 4

Max nTPM: 191.1
Min nTPM: 102.6
Sample A Female 104.6
Sample B Female 102.6
Sample C Male 191.1
Sample D Male 110.3
Septum
nTPM: 99.4
Samples: 4

Max nTPM: 108.0
Min nTPM: 88.2
Sample A Female 98.2
Sample B Female 88.2
Sample C Male 108.0
Sample D Male 103.2
Ventral pallidum
nTPM: 101.9
Samples: 4

Max nTPM: 125.1
Min nTPM: 74.7
Sample A Female 93.7
Sample B Female 113.9
Sample C Male 125.1
Sample D Male 74.7

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

443.5
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 399.7
Samples: 4

Max nTPM: 415.9
Min nTPM: 390.7
Sample A Male 415.9
Sample B Male 390.7
Sample C Female 398.9
Sample D Female 393.2
Septum
nTPM: 443.5
Samples: 4

Max nTPM: 489.0
Min nTPM: 401.4
Sample A Male 401.4
Sample B Male 489.0
Sample C Female 478.5
Sample D Female 405.2
Ventral forebrain
nTPM: 441.3
Samples: 4

Max nTPM: 499.0
Min nTPM: 411.1
Sample A Male 411.1
Sample B Male 432.5
Sample C Female 499.0
Sample D Female 422.6

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

7.9
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 7.5
70445676 Antisense, RP_050614_04_D01, Mouse strain C57BL/6J (56 days, male) 7.5
Pallidum
Expression energy: 7.9
70445676 Antisense, RP_050614_04_D01, Mouse strain C57BL/6J (56 days, male) 7.9

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