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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
321.9
nTPM
GTEx:
321.9
nTPM
FANTOM5:
118.1
Scaled Tags Per Million
Pig:
137.4
nTPM
Mouse:
246.5
nTPM
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
321.9
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 321.9
Samples: 105
Max nTPM: 526.4
Min nTPM: 186.0
Std nTPM: 68.3
Median nTPM:
491_1
89 years, female
526.4
2_1
77 years, female
477.9
490_1
67 years, female
475.3
89_1
63 years, male
447.9
162_1
79 years, female
447.8
413_1
59 years, female
438.6
501_1
88 years, male
430.6
139_1
64 years, female
425.6
308_1
70 years, female
423.3
149_1
88 years, male
416.3
119_1
70 years, female
412.7
495_1
57 years, female
410.2
4_1
88 years, female
410.1
35_1
74 years, female
404.3
315_1
62 years, female
402.7
137_1
83 years, male
402.5
117_1
61 years, male
398.4
120_1
70 years, female
398.1
414_1
84 years, female
390.1
43_1
64 years, female
387.7
17_1
71 years, male
387.6
311_1
78 years, male
379.5
447_1
81 years, male
376.5
42_1
85 years, male
374.3
307_1
66 years, female
374.3
415_1
77 years, female
371.5
142_1
61 years, female
369.3
237_1
82 years, male
365.4
81_1
67 years, male
364.0
109_1
81 years, female
360.0
145_1
84 years, male
356.8
384_1
83 years, male
356.3
153_1
70 years, female
355.3
313_1
79 years, female
353.7
348_1
84 years, male
353.1
466_1
57 years, female
351.5
99_1
64 years, male
350.7
324_1
76 years, male
347.8
375_1
74 years, female
346.1
6_1
73 years, female
346.0
9_1
66 years, female
343.7
126_1
63 years, male
335.0
32_1
67 years, male
334.9
115_1
83 years, male
331.4
396_1
62 years, male
330.3
265_1
87 years, male
329.6
266_1
85 years, male
327.1
314_1
67 years, male
326.7
389_1
86 years, female
324.6
322_1
76 years, male
320.5
316_1
62 years, male
320.2
18_1
88 years, male
319.1
173_1
67 years, male
312.2
379_1
60 years, male
310.7
254_1
77 years, female
309.9
217_1
76 years, male
308.9
468_1
89 years, male
307.7
41_1
94 years, female
303.1
347_1
72 years, male
303.0
317_1
60 years, male
301.6
377_1
82 years, female
300.3
480_1
63 years, male
299.4
518_1
75 years, female
298.8
386_1
76 years, male
297.7
319_1
81 years, male
293.1
246_1
77 years, male
287.5
526_1
61 years, male
287.0
264_1
73 years, female
285.0
243_1
75 years, male
281.8
229_1
69 years, female
280.4
295_1
61 years, female
279.3
321_1
62 years, female
278.8
499_1
55 years, female
277.7
189_1
76 years, male
276.5
506_1
65 years, male
275.0
355_1
70 years, female
274.3
351_1
91 years, male
273.6
405_1
91 years, male
269.5
350_1
84 years, female
269.0
251_1
78 years, male
262.4
353_1
82 years, female
260.7
394_1
75 years, female
258.0
288_1
66 years, female
257.4
404_1
82 years, female
257.3
349_1
83 years, male
256.3
320_1
89 years, female
253.8
503_1
68 years, male
252.5
335_1
73 years, female
252.3
452_1
88 years, female
251.9
376_1
75 years, female
248.9
177_1
74 years, male
245.7
291_1
76 years, male
245.4
218_1
71 years, female
239.4
286_1
68 years, female
239.3
356_1
87 years, female
238.0
292_1
71 years, male
237.5
352_1
62 years, male
234.9
354_1
81 years, female
234.7
517_1
88 years, male
231.8
318_1
68 years, male
228.8
406_1
79 years, male
226.7
293_1
68 years, female
217.1
425_1
59 years, female
216.3
172_1
72 years, female
211.8
163_1
78 years, male
186.0
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.