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ANXA2
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TISSUE PRIMARY DATA SMALL INTESTINE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Small intestine
Tissue proteome
Intestine
SMALL INTESTINE - Expression summary
Protein expression
Small intestinei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glandular cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:473.4 nTPM
HPA:473.4 nTPM
GTEx:429.8 nTPM
FANTOM5:75.1 Scaled Tags Per Million

SMALL INTESTINE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA046964Antibody HPA061798Antibody CAB004311
Glandular cells MediumMediumNot detected


SMALL INTESTINE - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Average nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

473.4
overview
Male, age 65
Small intestine sample 232
nTPM: 493.3
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40

overview
Male, age 39
Small intestine sample 233
nTPM: 483.3
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55

overview
Male, age 68
Small intestine sample 234
nTPM: 394.1
Cell types%
Glandular cells:
30

Smooth muscle cells:
15

Other cell types:
55

N/A
Male, age 85
Small intestine sample 235
nTPM: 523

SMALL INTESTINE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

429.8
GTEx sample id Sample description nTPM
Small Intestine - Terminal Ileum
Average nTPM: 429.8
Samples: 187

Max nTPM: 1220.9
Min nTPM: 72.5
Std nTPM: 201.7
Median nTPM: 379.5
GTEX-13W3W-2026-SM-5K7UL 60-69 years, female 1220.9
GTEX-YFCO-1326-SM-664NV 40-49 years, male 961.5
GTEX-111YS-1426-SM-5GID8 60-69 years, male 936.9
GTEX-1CAMS-2426-SM-7DHMV 40-49 years, female 919.4
GTEX-14DAR-1426-SM-5RQIR 50-59 years, male 889.0
GTEX-ZTX8-0526-SM-59HLD 20-29 years, male 874.0
GTEX-13X6H-1826-SM-7EWCZ 50-59 years, female 851.5
GTEX-1J8Q3-2526-SM-CNNQ4 60-69 years, male 819.7
GTEX-13FTW-2026-SM-5IJE2 40-49 years, male 806.6
GTEX-145LT-1026-SM-5LU9O 40-49 years, male 786.0
GTEX-1122O-1326-SM-5H11F 60-69 years, female 776.8
GTEX-133LE-1426-SM-5IFH1 20-29 years, female 764.4
GTEX-WY7C-1826-SM-4ONCE 50-59 years, male 753.8
GTEX-WFG8-1626-SM-4LVMB 20-29 years, male 742.2
GTEX-16MTA-1526-SM-6LPJB 50-59 years, male 741.8
GTEX-15G1A-1726-SM-6LPI4 30-39 years, male 740.0
GTEX-14XAO-1926-SM-6ETZO 60-69 years, female 736.8
GTEX-XGQ4-1326-SM-4GIDU 50-59 years, male 735.9
GTEX-14PKV-2026-SM-6AJ9A 20-29 years, female 726.9
GTEX-ZLV1-1126-SM-4WWBW 60-69 years, female 726.6
GTEX-14PJ6-1726-SM-6AJBN 60-69 years, female 716.6
GTEX-1AMFI-1926-SM-731F2 50-59 years, female 713.6
GTEX-XUZC-1426-SM-4BRV3 30-39 years, female 706.9
GTEX-ZPCL-1726-SM-57WEO 60-69 years, female 703.9
GTEX-ZA64-1226-SM-5HL7B 20-29 years, male 700.1
GTEX-13PL7-2626-SM-5IFH4 60-69 years, female 694.4
GTEX-Y5LM-1626-SM-4VDTB 40-49 years, female 682.3
GTEX-1GMR2-1026-SM-7MKHJ 50-59 years, male 680.8
GTEX-131XG-1726-SM-5LZUR 50-59 years, female 663.2
GTEX-13D11-0726-SM-5LZZB 50-59 years, female 657.8
GTEX-11DXX-1626-SM-5H11H 60-69 years, female 641.0
GTEX-ZTSS-0926-SM-59865 40-49 years, male 638.3
GTEX-16AAH-1426-SM-7KFTR 50-59 years, male 627.0
GTEX-YB5E-1526-SM-5IFIE 40-49 years, male 620.7
GTEX-ZZ64-0526-SM-5GZXM 20-29 years, male 619.7
GTEX-ZLWG-1626-SM-DNZZ1 50-59 years, female 618.6
GTEX-WHSB-1026-SM-4M1XN 50-59 years, male 617.6
GTEX-1CAMR-0826-SM-7MKFK 20-29 years, male 615.3
GTEX-11EQ9-1326-SM-5985X 30-39 years, male 609.8
GTEX-ZVT2-2126-SM-5NQ93 50-59 years, female 608.9
GTEX-14PJ3-1326-SM-664O7 50-59 years, male 596.7
GTEX-YEC4-1726-SM-4W21E 40-49 years, male 588.2
GTEX-ZDTT-1726-SM-5HL69 60-69 years, male 582.9
GTEX-144GM-1026-SM-79OKU 20-29 years, male 579.3
GTEX-1KXAM-2026-SM-DHXKI 60-69 years, male 574.4
GTEX-ZYFG-2026-SM-5E43Y 60-69 years, female 571.1
GTEX-1MUQO-2426-SM-EAZ5A 60-69 years, male 565.5
GTEX-XBED-1426-SM-4AT4G 60-69 years, male 562.9
GTEX-131XF-1326-SM-5GCMQ 60-69 years, male 562.1
GTEX-ZXES-1526-SM-5NQ95 30-39 years, female 557.4
GTEX-ZVZP-1826-SM-5GZXB 50-59 years, male 548.5
GTEX-1JN76-1126-SM-C1YRL 20-29 years, female 540.2
GTEX-WQUQ-2426-SM-4MVNW 60-69 years, male 538.9
GTEX-1BAJH-2526-SM-7IGOT 70-79 years, male 528.3
GTEX-16NGA-1126-SM-7KFSY 40-49 years, female 523.7
GTEX-YF7O-1826-SM-5IFIU 50-59 years, male 520.9
GTEX-Y9LG-1626-SM-5IFHM 30-39 years, male 519.1
GTEX-1QP2A-2426-SM-EXOJA 50-59 years, male 518.6
GTEX-1R7EU-1326-SM-E6CQ6 60-69 years, male 516.9
GTEX-14PKU-1626-SM-6871C 40-49 years, female 504.5
GTEX-ZPIC-2326-SM-57WDW 40-49 years, female 503.3
GTEX-ZG7Y-1926-SM-DNZZ5 50-59 years, male 501.3
GTEX-15EU6-1826-SM-7PC1W 50-59 years, male 487.2
GTEX-14PJN-0826-SM-686ZL 30-39 years, male 487.0
GTEX-X5EB-1626-SM-4E3IV 40-49 years, male 472.6
GTEX-11I78-1126-SM-5A5K5 50-59 years, female 468.9
GTEX-139YR-2226-SM-5IFFW 50-59 years, male 468.5
GTEX-1L5NE-1826-SM-EV79T 50-59 years, male 468.3
GTEX-1R7EV-1226-SM-DTX82 40-49 years, male 452.5
GTEX-139T6-1026-SM-5IJGC 50-59 years, male 450.3
GTEX-1399R-2026-SM-5K7WN 30-39 years, male 444.8
GTEX-13113-1226-SM-5EGHT 60-69 years, female 440.8
GTEX-14PN3-2026-SM-68729 60-69 years, female 437.5
GTEX-1JK1U-1226-SM-CNNPN 60-69 years, male 436.2
GTEX-1JMQK-2426-SM-CXZJU 60-69 years, male 432.0
GTEX-XAJ8-0526-SM-47JYK 40-49 years, male 431.0
GTEX-1192X-2526-SM-59868 50-59 years, male 425.2
GTEX-1R9K4-2326-SM-E6CRB 60-69 years, male 421.9
GTEX-13RTK-0826-SM-5Q5C6 20-29 years, male 418.8
GTEX-13NYB-1826-SM-5J1N3 40-49 years, male 415.8
GTEX-1399S-2026-SM-5KM4B 30-39 years, female 410.4
GTEX-1399U-2126-SM-5IFEZ 50-59 years, female 409.4
GTEX-ZVP2-1726-SM-5GU5P 50-59 years, male 405.7
GTEX-11P82-0826-SM-5P9GU 20-29 years, male 404.0
GTEX-1J8QM-1026-SM-C1YQA 60-69 years, female 401.1
GTEX-1MGNQ-2326-SM-EV7BG 40-49 years, male 400.3
GTEX-ZTPG-2626-SM-57WFX 20-29 years, female 398.8
GTEX-13O21-1026-SM-5IJDU 50-59 years, male 397.7
GTEX-Y111-2226-SM-4SOJB 50-59 years, male 397.0
GTEX-XXEK-1026-SM-4BRUW 50-59 years, male 391.2
GTEX-Y3IK-1726-SM-4YCCR 50-59 years, female 389.0
GTEX-1NSGN-2126-SM-DPRYN 50-59 years, male 388.2
GTEX-1B8KE-1726-SM-7IGMN 50-59 years, male 384.8
GTEX-14PK6-1626-SM-6871I 70-79 years, female 379.5
GTEX-18A66-2526-SM-7KFTZ 60-69 years, male 377.8
GTEX-111CU-1326-SM-5NQ8L 50-59 years, male 371.5
GTEX-13CF3-1226-SM-5LZXN 60-69 years, female 369.7
GTEX-WFJO-0926-SM-4LVM2 30-39 years, male 368.3
GTEX-1QPFJ-2626-SM-DPRZU 30-39 years, female 365.7
GTEX-ZP4G-1626-SM-57WGD 20-29 years, female 365.1
GTEX-11P7K-1626-SM-5GU63 30-39 years, male 362.3
GTEX-VJYA-0926-SM-4KL1N 60-69 years, male 359.6
GTEX-XMK1-1826-SM-4B66F 40-49 years, male 356.2
GTEX-1B8KZ-1126-SM-7IGLX 50-59 years, male 353.9
GTEX-1C64O-2526-SM-79ONO 60-69 years, male 350.0
GTEX-1R9PM-1626-SM-DPRY9 20-29 years, male 349.6
GTEX-13QBU-1926-SM-5IJEW 40-49 years, female 349.0
GTEX-14E6E-1626-SM-5RQI7 30-39 years, male 348.0
GTEX-ZF29-1626-SM-4WKFJ 60-69 years, female 345.0
GTEX-WH7G-1626-SM-4LVMY 40-49 years, male 344.0
GTEX-13O61-1326-SM-5KM31 60-69 years, male 343.8
GTEX-Z9EW-0926-SM-5CVMM 40-49 years, male 343.6
GTEX-11DXZ-1326-SM-5H11X 50-59 years, male 343.2
GTEX-ZEX8-1826-SM-57WBH 50-59 years, male 340.1
GTEX-1AX8Z-2526-SM-731E3 60-69 years, male 337.2
GTEX-12WSK-1526-SM-5CVNO 40-49 years, female 333.3
GTEX-12BJ1-1926-SM-5HL9Z 60-69 years, male 330.5
GTEX-1K9T9-2726-SM-D4P3E 50-59 years, female 328.8
GTEX-UPK5-2026-SM-4JBIM 40-49 years, male 328.5
GTEX-1OKEX-1126-SM-DTXEB 60-69 years, male 327.6
GTEX-13OVI-1926-SM-5IJCG 60-69 years, female 325.1
GTEX-1C475-1426-SM-793CH 40-49 years, female 321.8
GTEX-11XUK-1426-SM-5EQMG 40-49 years, female 315.7
GTEX-11NSD-1726-SM-5N9C3 20-29 years, male 315.2
GTEX-WRHK-1026-SM-4MVOD 20-29 years, female 314.8
GTEX-ZLFU-1526-SM-4WWBT 40-49 years, male 314.4
GTEX-Y114-1426-SM-4TT6W 50-59 years, female 312.6
GTEX-14BMU-1426-SM-5TDE5 20-29 years, female 307.3
GTEX-1I1GT-1826-SM-ARZLW 60-69 years, female 307.0
GTEX-13111-1426-SM-5DUW3 50-59 years, male 299.6
GTEX-1CB4F-1826-SM-7MGXI 60-69 years, male 297.8
GTEX-1QCLZ-2126-SM-EWRNC 60-69 years, female 294.9
GTEX-11VI4-1626-SM-5EQKO 40-49 years, female 290.8
GTEX-1PDJ9-1826-SM-E9U66 20-29 years, male 290.6
GTEX-117YX-0326-SM-5GICL 50-59 years, male 287.3
GTEX-1JJE9-2226-SM-CXZJM 70-79 years, male 273.7
GTEX-1RAZA-1826-SM-DTXA2 20-29 years, male 273.1
GTEX-11TUW-1926-SM-5BC58 60-69 years, male 271.1
GTEX-17KNJ-1626-SM-718AL 50-59 years, male 271.0
GTEX-WFG7-1726-SM-4LVME 20-29 years, male 271.0
GTEX-14C39-1826-SM-5ZZW4 40-49 years, male 269.2
GTEX-1GL5R-2026-SM-7MKHP 50-59 years, male 264.2
GTEX-145ME-0926-SM-5O9AR 40-49 years, female 263.7
GTEX-1EMGI-2826-SM-7IGMR 60-69 years, male 263.2
GTEX-1HSMQ-2226-SM-C1YRD 50-59 years, male 262.8
GTEX-13FH7-1226-SM-5IJFK 50-59 years, female 262.1
GTEX-ZQG8-2526-SM-57WEQ 60-69 years, female 261.8
GTEX-1F75I-2526-SM-9WPOZ 40-49 years, male 261.7
GTEX-1IKOE-1926-SM-ARU7V 30-39 years, female 256.7
GTEX-Y5V5-1826-SM-4VDS5 60-69 years, female 249.1
GTEX-17MFQ-1026-SM-7KFSZ 20-29 years, male 248.3
GTEX-15DZA-0826-SM-6AJBF 30-39 years, female 247.3
GTEX-X15G-1426-SM-4PQZK 50-59 years, female 247.3
GTEX-1R9K5-2026-SM-E6CPS 50-59 years, male 246.6
GTEX-1497J-1926-SM-5TDCC 60-69 years, male 245.5
GTEX-1S5ZA-1326-SM-EV7BB 20-29 years, male 241.0
GTEX-WFON-1526-SM-4LVMP 40-49 years, male 239.5
GTEX-1PIEJ-1526-SM-E6CP8 20-29 years, female 236.5
GTEX-1QW4Y-1226-SM-EWRMY 30-39 years, male 228.9
GTEX-16A39-1426-SM-6LLI6 30-39 years, female 228.2
GTEX-Y3I4-1326-SM-4TT8Z 50-59 years, male 225.5
GTEX-1OJC3-1626-SM-E9U65 20-29 years, male 221.7
GTEX-1H1DE-1426-SM-9JGHV 20-29 years, male 221.3
GTEX-ZF2S-1726-SM-57WFT 50-59 years, female 221.0
GTEX-1LH75-1926-SM-DIPGD 50-59 years, female 218.4
GTEX-1QP28-1726-SM-E6CRK 50-59 years, female 215.0
GTEX-17HHE-1726-SM-79OKT 50-59 years, male 212.8
GTEX-VUSG-1726-SM-4KKZL 50-59 years, male 212.2
GTEX-1S82Z-1826-SM-E9TIK 30-39 years, female 211.9
GTEX-WYJK-1526-SM-4ONCW 50-59 years, male 211.5
GTEX-1RAZR-1826-SM-E6CRE 40-49 years, male 210.7
GTEX-1RAZQ-2226-SM-DPRZR 30-39 years, male 206.8
GTEX-18QFQ-1626-SM-72D7H 30-39 years, male 204.6
GTEX-148VJ-2226-SM-5NQ9M 70-79 years, male 203.6
GTEX-1GMR3-2726-SM-7MKFB 40-49 years, male 202.0
GTEX-1LGOU-1426-SM-D3L8N 20-29 years, female 192.2
GTEX-1R9JW-1926-SM-EVR4J 30-39 years, female 191.4
GTEX-1H11D-2526-SM-9JGGU 40-49 years, male 189.9
GTEX-183FY-1626-SM-793D8 20-29 years, male 179.6
GTEX-1LBAC-1526-SM-CXZKU 20-29 years, male 161.9
GTEX-WEY5-1526-SM-4LMJF 40-49 years, female 159.8
GTEX-ZQUD-0926-SM-57WE3 30-39 years, male 150.6
GTEX-XPVG-1726-SM-4B65W 50-59 years, male 143.5
GTEX-ZAB5-1526-SM-5HL9P 50-59 years, male 142.5
GTEX-ZC5H-2326-SM-4WAYT 40-49 years, female 135.9
GTEX-11LCK-1926-SM-5A5KE 30-39 years, male 119.3
GTEX-131XE-0926-SM-5HL7J 50-59 years, male 72.5
Show allShow less

SMALL INTESTINE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

75.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Small intestine
Scaled Tags Per Million: 75.1
FF:10024-101D6 15,40,85 years, mixed 75.1

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