PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:421.7 nTPM
FANTOM5:39.9 Scaled Tags Per Million
Pig:145.5 nTPM
Mouse:1031.6 nTPM
Allen mouse:0.5 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 421.7
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 342.8
2188 Female, age 91, both hemispheres 403.1
2301 Female, age 85, both hemispheres 366.4
2090 Male, age 80, both hemispheres 354.2
1984 Male, age 76, both hemispheres 247.5
Area postrema
nTPM: 398.6
2799 Male, age 61, both hemispheres 514.3
2306 Male, age 80, both hemispheres 431.9
2054 Male, age 76, both hemispheres 249.5
Dorsal cochlear nucleus
nTPM: 344.8
2802 Male, age 74, right hemisphere 403.1
2378 Male, age 80, both hemispheres 376.5
2187 Female, age 91, both hemispheres 371.8
2370 Male, age 61, both hemispheres 322.1
2058 Male, age 76, both hemispheres 250.4
Dorsal medullary reticular nucleus
nTPM: 280.6
2373 Male, age 61, both hemispheres 334.2
2040 Female, age 85, both hemispheres 277.2
2088 Male, age 76, both hemispheres 230.3
Dorsal motor vagal complex
nTPM: 362.1
2797 Male, age 61, both hemispheres 556.5
2643 Male, age 74, both hemispheres 426.1
2807 Female, age 85, both hemispheres 406.5
2813 Female, age 72, unknown 373.3
2133 Female, age 91, both hemispheres 300.5
2185 Male, age 76, both hemispheres 296.0
2844 Male, age 55, unknown 270.3
2000 Male, age 74, unknown 267.3
Dorsal tegmental nucleus
nTPM: 359.1
2358 Male, age 61, both hemispheres 487.0
2326 Male, age 74, both hemispheres 351.9
2083 Male, age 80, both hemispheres 341.6
1936 Male, age 76, left hemisphere 255.9
Dorsolateral tegmental area
nTPM: 319.5
2337 Male, age 61, both hemispheres 394.7
2654 Male, age 80, both hemispheres 368.3
2751 Female, age 85, both hemispheres 311.5
2360 Male, age 74, both hemispheres 265.9
2141 Male, age 76, both hemispheres 257.4
Gigantocellular reticular nuclei, medullary
nTPM: 299.5
2314 Male, age 61, both hemispheres 374.2
2387 Female, age 91, both hemispheres 325.4
1876 Female, age 85, both hemispheres 309.8
2310 Male, age 80, both hemispheres 283.6
2022 Male, age 76, right hemisphere 268.8
2462 Male, age 74, both hemispheres 235.5
Gigantocellular reticular nuclei, pars
nTPM: 263.4
2336 Male, age 61, both hemispheres 298.2
2706 Male, age 80, both hemispheres 276.8
2084 Female, age 85, both hemispheres 274.6
2330 Male, age 80, both hemispheres 251.5
2168 Male, age 76, both hemispheres 215.9
Inferior olive
nTPM: 368.2
2628 Female, age 91, both hemispheres 417.0
2178 Male, age 61, both hemispheres 370.7
2563 Male, age 74, both hemispheres 360.9
2379 Male, age 80, both hemispheres 358.9
2085 Female, age 85, both hemispheres 333.3
Kolliker-Fuse nucleus
nTPM: 339.6
2793 Female, age 91, left hemisphere 370.0
2315 Male, age 76, right hemisphere 363.4
2163 Male, age 80, both hemispheres 285.4
Lateral lemniscal nuclei
nTPM: 240.5
2169 Male, age 76, both hemispheres 276.4
2320 Female, age 91, left hemisphere 239.6
2746 Female, age 85, left hemisphere 234.2
2453 Male, age 74, right hemisphere 233.6
2036 Male, age 80, both hemispheres 218.6
Lateral medullary reticular nucleus
nTPM: 359.4
2374 Male, age 61, both hemispheres 414.1
2190 Female, age 85, both hemispheres 407.0
2804 Female, age 91, both hemispheres 391.2
2852 Male, age 80, both hemispheres 384.9
2305 Male, age 74, both hemispheres 292.0
2044 Male, age 76, both hemispheres 267.0
Lateral parabrachial nucleus
nTPM: 342.5
2792 Male, age 76, both hemispheres 439.8
2013 Male, age 80, both hemispheres 344.2
2790 Male, age 61, both hemispheres 309.4
2139 Female, age 85, right hemisphere 276.4
Lateral vestibular nucleus
nTPM: 309.2
2311 Male, age 80, both hemispheres 375.2
2184 Male, age 76, both hemispheres 243.2
Locus coeruleus
nTPM: 267.9
2720 Male, age 74, both hemispheres 341.8
2788 Male, age 74, unknown 306.6
2162 Male, age 80, both hemispheres 303.1
2123 Female, age 91, both hemispheres 260.5
2317 Female, age 72, unknown 236.5
2014 Male, age 55, unknown 216.9
1980 Male, age 76, both hemispheres 210.0
Medial olivary nucleus
nTPM: 421.7
2851 Male, age 80, both hemispheres 465.5
1962 Male, age 76, both hemispheres 442.4
1943 Male, age 61, both hemispheres 427.3
2138 Female, age 91, both hemispheres 351.7
Medial parabrachial nucleus
nTPM: 322.5
2170 Female, age 91, both hemispheres 396.2
2854 Male, age 80, both hemispheres 364.8
2786 Male, age 76, both hemispheres 298.3
2156 Male, age 61, both hemispheres 282.9
2463 Female, age 85, right hemisphere 270.4
Medial periolivary nuclei
nTPM: 261.2
2458 Female, age 91, both hemispheres 309.3
2081 Male, age 80, both hemispheres 282.1
2063 Male, age 76, both hemispheres 263.1
2791 Male, age 74, right hemisphere 245.6
2171 Female, age 85, both hemispheres 206.0
Medial vestibular nucleus
nTPM: 310.5
2624 Male, age 61, both hemispheres 384.5
2803 Female, age 91, both hemispheres 356.6
2801 Male, age 74, both hemispheres 340.0
2743 Female, age 85, both hemispheres 281.8
2093 Male, age 80, both hemispheres 273.5
2134 Male, age 76, both hemispheres 226.9
Motor facial nucleus
nTPM: 270.2
2795 Female, age 91, both hemispheres 328.5
2697 Female, age 85, both hemispheres 326.2
2365 Male, age 74, right hemisphere 284.9
2126 Male, age 61, both hemispheres 264.9
2062 Male, age 76, both hemispheres 217.9
2327 Male, age 80, both hemispheres 198.6
Motor hypoglossal nucleus
nTPM: 323.7
2182 Male, age 80, both hemispheres 422.2
2461 Male, age 61, both hemispheres 350.0
2132 Female, age 85, both hemispheres 328.1
2125 Female, age 91, both hemispheres 295.6
2277 Male, age 76, both hemispheres 222.7
Motor trigeminal nucleus
nTPM: 281.6
2335 Male, age 61, both hemispheres 300.7
2321 Female, age 91, both hemispheres 295.1
2560 Male, age 74, both hemispheres 294.9
2309 Male, age 76, both hemispheres 284.3
2079 Male, age 80, both hemispheres 232.9
Nuclei of the trapezoid body
nTPM: 243.5
1983 Male, age 76, both hemispheres 298.2
2166 Male, age 80, both hemispheres 269.5
2368 Female, age 91, both hemispheres 247.5
2159 Male, age 61, both hemispheres 222.8
2735 Female, age 85, both hemispheres 179.6
Nucleus ambiguus
nTPM: 266.3
2071 Male, age 76, both hemispheres 357.1
2096 Female, age 85, both hemispheres 175.4
Nucleus cuneatus
nTPM: 336.1
2808 Female, age 85, both hemispheres 439.7
2380 Male, age 80, both hemispheres 395.8
2805 Female, age 91, both hemispheres 377.2
2381 Male, age 80, both hemispheres 371.7
2562 Male, age 61, both hemispheres 336.5
2564 Male, age 74, both hemispheres 328.4
2376 Male, age 61, both hemispheres 324.5
2100 Male, age 76, both hemispheres 231.0
2131 Male, age 76, both hemispheres 220.2
Nucleus gracilis
nTPM: 421.1
2382 Male, age 80, both hemispheres 469.6
2627 Male, age 74, both hemispheres 403.9
2299 Female, age 85, both hemispheres 389.7
Nucleus raphe magnus
nTPM: 246.6
2051 Male, age 76, both hemispheres 291.9
2459 Female, age 91, both hemispheres 276.6
2455 Male, age 74, both hemispheres 258.5
2328 Male, age 80, both hemispheres 244.7
2172 Female, age 85, both hemispheres 213.7
2160 Male, age 61, both hemispheres 194.0
Nucleus raphe obscurus
nTPM: 379.0
2845 Female, age 85, midline 408.2
2800 Male, age 61, midline 378.1
2142 Male, age 76, midline 350.8
Nucleus raphe pallidus
nTPM: 399.5
1924 Male, age 61, midline 476.1
2145 Male, age 76, midline 361.5
2183 Male, age 80, midline 360.8
Nucleus tractus solitarii
nTPM: 305.0
2144 Female, age 91, right hemisphere 376.8
2191 Female, age 85, both hemispheres 369.1
2307 Male, age 80, both hemispheres 245.1
2656 Male, age 76, both hemispheres 229.2
Paramedian reticular nucleus
nTPM: 309.3
2052 Male, age 76, both hemispheres 442.1
2313 Male, age 61, both hemispheres 281.4
2057 Male, age 80, both hemispheres 258.3
2050 Female, age 85, both hemispheres 255.2
Parvicellular reticular nuclei
nTPM: 279.8
2095 Male, age 76, both hemispheres 311.1
2119 Male, age 80, both hemispheres 285.8
2558 Male, age 74, both hemispheres 242.5
Parvicellular reticular nuclei, medullary
nTPM: 289.1
2189 Female, age 91, both hemispheres 305.8
2181 Male, age 80, left hemisphere 288.7
2091 Female, age 85, both hemispheres 272.9
Pedunculopontine tegmental nucleus
nTPM: 326.5
2338 Male, age 61, both hemispheres 430.4
2334 Male, age 80, both hemispheres 328.9
1921 Female, age 85, both hemispheres 220.3
Peritrigeminal nucleus
nTPM: 331.7
2067 Female, age 85, both hemispheres 380.4
2136 Male, age 76, both hemispheres 330.7
2179 Male, age 61, both hemispheres 284.0
Pontine nuclei
nTPM: 254.6
2319 Female, age 91, both hemispheres 304.1
2454 Male, age 74, left hemisphere 279.9
1863 Male, age 55, unknown 273.7
2109 Female, age 72, unknown 259.8
1968 Male, age 76, left hemisphere 254.0
2115 Male, age 80, left hemisphere 253.5
2787 Female, age 85, both hemispheres 237.4
2727 Male, age 61, right hemisphere 174.2
Pontine raphe nucleus
nTPM: 244.8
2853 Male, age 76, midline 269.5
2122 Female, age 85, midline 220.1
Posteroventral cochlear nucleus
nTPM: 347.1
2341 Male, age 80, both hemispheres 465.5
2135 Female, age 91, both hemispheres 372.6
2371 Male, age 61, both hemispheres 362.5
2070 Male, age 76, both hemispheres 291.0
2752 Female, age 85, both hemispheres 244.1
Prepositus hypoglossal nucleus
nTPM: 320.9
2855 Female, age 85, right hemisphere 340.2
2086 Male, age 80, both hemispheres 301.6
Principal sensory trigeminal nucleus
nTPM: 235.0
2367 Female, age 91, left hemisphere 303.0
2324 Male, age 76, both hemispheres 238.6
2158 Male, age 61, both hemispheres 209.7
2008 Male, age 80, left hemisphere 188.7
Reticular pontine nucleus, caudal
nTPM: 318.1
2457 Female, age 91, both hemispheres 437.5
2559 Male, age 74, both hemispheres 338.0
2092 Male, age 76, both hemispheres 310.3
2332 Male, age 80, right hemisphere 186.5
Reticular pontine nucleus, oral
nTPM: 307.5
2366 Female, age 91, both hemispheres 362.6
2361 Male, age 74, both hemispheres 323.8
2167 Male, age 76, both hemispheres 311.4
1939 Male, age 80, both hemispheres 309.8
2012 Female, age 85, both hemispheres 229.9
Reticulotegmental nucleus
nTPM: 277.8
2452 Male, age 74, both hemispheres 327.0
2322 Female, age 91, both hemispheres 289.7
2333 Male, age 80, both hemispheres 263.9
2325 Male, age 76, both hemispheres 230.4
Spinal trigeminal nucleus, caudal
nTPM: 312.5
2642 Male, age 74, both hemispheres 359.4
2308 Male, age 80, both hemispheres 327.7
2312 Male, age 61, both hemispheres 320.2
2390 Female, age 91, both hemispheres 309.5
2447 Male, age 76, both hemispheres 245.6
Spinal trigeminal nucleus, interpolar
nTPM: 304.0
2389 Female, age 91, both hemispheres 318.6
2625 Male, age 61, both hemispheres 310.5
2386 Female, age 85, both hemispheres 310.2
2033 Male, age 80, both hemispheres 304.1
2066 Male, age 76, right hemisphere 276.6
Spinal trigeminal nucleus, oral
nTPM: 261.2
2164 Male, age 80, both hemispheres 293.7
1978 Male, age 76, both hemispheres 270.5
2737 Female, age 85, both hemispheres 219.4
Spinal vestibular nucleus
nTPM: 343.2
2796 Male, age 61, both hemispheres 401.9
2384 Male, age 74, both hemispheres 395.9
2806 Female, age 85, both hemispheres 357.0
2780 Male, age 80, both hemispheres 322.3
2186 Female, age 91, both hemispheres 296.5
2748 Male, age 76, both hemispheres 285.8
Subcoeruleus area
nTPM: 288.1
2451 Male, age 74, both hemispheres 343.8
2369 Female, age 85, left hemisphere 324.4
1958 Male, age 80, both hemispheres 277.6
2323 Female, age 91, left hemisphere 263.9
2089 Male, age 76, left hemisphere 230.6
Superior olive
nTPM: 273.2
2020 Male, age 76, both hemispheres 341.6
2561 Female, age 91, both hemispheres 306.4
2364 Male, age 74, right hemisphere 259.6
1875 Female, age 85, both hemispheres 233.2
2329 Male, age 80, right hemisphere 225.2
Superior vestibular nucleus
nTPM: 334.4
2383 Male, age 74, both hemispheres 397.4
2015 Male, age 80, both hemispheres 339.5
2061 Male, age 76, both hemispheres 266.3
Ventral medullary reticular nucleus
nTPM: 317.3
2372 Male, age 61, both hemispheres 370.9
2060 Male, age 76, both hemispheres 263.8
Ventral periolivary nuclei
nTPM: 265.5
2023 Male, age 76, both hemispheres 314.5
2794 Female, age 91, left hemisphere 279.6
2165 Male, age 80, both hemispheres 263.5
2130 Female, age 85, both hemispheres 204.6
Ventrolateral medulla, A1-C1 cell groups
nTPM: 340.9
2118 Male, age 80, both hemispheres 367.5
2302 Female, age 91, both hemispheres 352.6
2180 Male, age 61, both hemispheres 340.6
2741 Female, age 85, both hemispheres 323.2
1986 Male, age 76, both hemispheres 320.5
Ventrolateral tegmental area, A5 NE cell group
nTPM: 294.8
2840 Female, age 85, both hemispheres 344.1
2359 Male, age 61, both hemispheres 320.2
2161 Male, age 80, both hemispheres 308.4
1959 Male, age 76, both hemispheres 284.0
2456 Female, age 91, both hemispheres 271.6
2449 Male, age 74, both hemispheres 240.5

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 39.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 31.6
FF:10165-103B3 76 years, female 36.7
FF:10182-103D2 60 years, female 26.5
Medulla oblongata
Scaled Tags Per Million: 39.9
FF:10174-103C3 60 years, female 68.9
FF:10155-103A2 76 years, female 28.4
FF:10038-101F2 18-64 years, mixed 22.4
Pons
Scaled Tags Per Million: 22.4
FF:10033-101E6 18-54 years, mixed 22.4

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 145.5
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 145.5
Samples: 4

Max nTPM: 173.2
Min nTPM: 115.7
Sample A Female 124.4
Sample B Female 115.7
Sample C Male 168.6
Sample D Male 173.2
Pons
nTPM: 145.4
Samples: 4

Max nTPM: 176.8
Min nTPM: 112.4
Sample A Female 133.1
Sample B Female 112.4
Sample C Male 176.8
Sample D Male 159.3

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 1031.6
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 1031.6
Samples: 4

Max nTPM: 1093.5
Min nTPM: 982.9
Sample A Male 1049.8
Sample B Male 1000.1
Sample C Female 982.9
Sample D Female 1093.5

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 0.5
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 0.5
71763583 Antisense, RP_050921_02_C07, Mouse strain C57BL/6J (56 days, male) 0.5
Pons
Expression energy: 0.3
71763583 Antisense, RP_050921_02_C07, Mouse strain C57BL/6J (56 days, male) 0.3

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