We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
NDUFB1
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE & INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCT & INT

  • NDUFB1
BRAIN SPINAL CORD Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
SPINAL CORD - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:333.2 nTPM
HPA Brain:111.6 nTPM
GTEx:333.2 nTPM
FANTOM5:96.6 Scaled Tags Per Million
Pig:66.3 nTPM

SPINAL CORD - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

111.6
Sample id Sample description nTPM
Cervical spinal cord, central gray
nTPM: 99.7
1981 Female, age 72, midline 123.4
2048 Male, age 55, midline 114.7
2565 Male, age 75, midline 110.9
2816 Male, age 47, midline 78.9
2194 Female, age 79, both hemispheres 70.3
Cervical spinal cord, dorsal horn
nTPM: 111.6
2173 Female, age 72, unknown 140.0
2069 Male, age 47, both hemispheres 115.9
1877 Male, age 55, unknown 114.2
2296 Male, age 66, both hemispheres 110.1
2721 Male, age 90, both hemispheres 99.3
2297 Male, age 75, both hemispheres 89.8
Cervical spinal cord, ventral horn
nTPM: 99.4
2098 Female, age 72, unknown 120.8
2480 Male, age 75, both hemispheres 113.8
2809 Male, age 90, both hemispheres 112.6
2295 Male, age 66, both hemispheres 92.7
2820 Female, age 79, both hemispheres 79.1
2068 Male, age 55, unknown 77.7

SPINAL CORD - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

333.2
GTEx sample id Sample description nTPM
Brain - Spinal cord (cervical c-1)
Average nTPM: 333.2
Samples: 159

Max nTPM: 714.2
Min nTPM: 149.4
Std nTPM: 92.7
Median nTPM: 317.4
GTEX-1LVA9-0011-R9a-SM-EYYWF 50-59 years, male 714.2
GTEX-1EKGG-0011-R9a-SM-CMKFV 60-69 years, male 701.7
GTEX-14E7W-0011-R9a-SM-62LE6 70-79 years, male 586.3
GTEX-1H3O1-0011-R9b-SM-CM2SQ 60-69 years, male 580.5
GTEX-1IGQW-0011-R9b-SM-D4P25 60-69 years, male 575.3
GTEX-1A8G7-0011-R9b-SM-7IGQH 60-69 years, male 520.4
GTEX-1GN2E-0011-R9b-SM-9WG7F 60-69 years, male 506.4
GTEX-13FTY-0011-R9b-SM-5KM2U 40-49 years, female 504.7
GTEX-PWO3-0011-R9A-SM-EVR2V 60-69 years, female 498.2
GTEX-1HGF4-0011-R9a-SM-ADEH9 60-69 years, male 489.1
GTEX-1JJ6O-0011-R9a-SM-EYYXP 60-69 years, male 481.8
GTEX-1J8EW-0011-R9b-SM-D4P2F 60-69 years, female 472.1
GTEX-1LB8K-0011-R9a-SM-EZ6MP 50-59 years, male 466.3
GTEX-1CB4H-0011-R9a-SM-CKZNL 60-69 years, female 464.9
GTEX-11ZUS-0011-R9b-SM-5BC76 30-39 years, male 454.6
GTEX-1KANB-0011-R9b-SM-EZ6MO 50-59 years, male 447.5
GTEX-1GZ4I-0011-R9b-SM-B2LY8 50-59 years, male 444.6
GTEX-11WQK-0011-R9b-SM-5BC6N 50-59 years, male 441.9
GTEX-1HFI6-0011-R9b-SM-CMKH4 40-49 years, male 438.4
GTEX-1IY9M-0011-R9b-SM-D3L8J 60-69 years, male 437.0
GTEX-1OJC4-0011-R9a-SM-EZ6N1 50-59 years, female 434.3
GTEX-11GSP-0011-R9b-SM-5NQ77 60-69 years, female 433.0
GTEX-1H1DF-0011-R9b-SM-CM2RN 40-49 years, female 432.6
GTEX-131YS-0011-R9b-SM-5EQLY 60-69 years, female 424.5
GTEX-11EMC-0011-R9b-SM-DO921 60-69 years, female 424.4
GTEX-11ZTS-0011-R9b-SM-DO93Q 60-69 years, female 420.5
GTEX-1J8JJ-0011-R9a-SM-ACKVF 60-69 years, female 417.5
GTEX-1JN1M-0011-R9a-SM-EZ6MR 60-69 years, female 412.5
GTEX-1192X-0011-R9b-SM-DO934 50-59 years, male 410.8
GTEX-T6MN-0011-R9A-SM-32QOZ 50-59 years, male 408.2
GTEX-11ZVC-0011-R9a-SM-57WC5 50-59 years, female 401.2
GTEX-1I19N-0011-R9a-SM-CMKHN 70-79 years, male 400.2
GTEX-1GF9V-0011-R9a-SM-CL53K 60-69 years, male 398.4
GTEX-1ICLZ-0011-R9a-SM-ARL7E 60-69 years, male 398.1
GTEX-1HBPH-0011-R9a-SM-CMKH3 40-49 years, female 394.8
GTEX-13NYB-0011-R9b-SM-5MR5P 40-49 years, male 391.4
GTEX-131XW-0011-R9a-SM-5N9EO 50-59 years, female 385.2
GTEX-1HSMO-0011-R9b-SM-CM2T2 60-69 years, male 381.0
GTEX-13X6I-0011-R9b-SM-5PNZJ 60-69 years, male 380.1
GTEX-13CIG-0011-R9a-SM-5K7VU 50-59 years, male 379.4
GTEX-1H1DG-0011-R9b-SM-ACKVB 70-79 years, male 377.9
GTEX-1I1CD-0011-R9a-SM-CMKHB 60-69 years, female 373.8
GTEX-13FLV-0011-R9b-SM-5L3DA 50-59 years, male 371.2
GTEX-QVUS-0011-R9A-SM-3GIJA 60-69 years, female 369.8
GTEX-1MJK2-0011-R9b-SM-EZ6MZ 50-59 years, male 368.7
GTEX-11DZ1-0011-R9a-SM-DO933 50-59 years, male 366.9
GTEX-XLM4-0011-R9A-SM-4AT45 60-69 years, male 366.1
GTEX-1I1GS-0011-R9b-SM-CMKHF 60-69 years, male 364.0
GTEX-1H3NZ-0011-R9a-SM-ADEH7 60-69 years, male 362.8
GTEX-1HBPI-0011-R9b-SM-ARL76 50-59 years, male 361.2
GTEX-1JMLX-0011-R9a-SM-EYYXM 50-59 years, male 357.8
GTEX-1LSNL-0011-R9b-SM-EYYWK 50-59 years, male 357.3
GTEX-1RQEC-0011-R9a-SM-EZ6N3 60-69 years, male 355.1
GTEX-1BAJH-0011-R9b-SM-7EPIQ 70-79 years, male 354.0
GTEX-YJ89-0011-R9a-SM-4SOK7 60-69 years, male 349.4
GTEX-1CAV2-0011-R9b-SM-9WG5M 40-49 years, female 349.2
GTEX-1EH9U-0011-R9b-SM-9WG5T 60-69 years, male 347.9
GTEX-1GN1U-0011-R9b-SM-CMKFW 50-59 years, female 345.5
GTEX-1C6VQ-0011-R9a-SM-7SB85 50-59 years, male 345.0
GTEX-1C6VS-0011-R9b-SM-9WG5W 60-69 years, male 344.5
GTEX-14BIM-0011-R9a-SM-6LLJL 60-69 years, female 339.6
GTEX-1F52S-0011-R9a-SM-9WG62 60-69 years, female 338.8
GTEX-1EU9M-0011-R9a-SM-9WG61 60-69 years, male 338.7
GTEX-1CAMQ-0011-R9a-SM-9WG5Z 40-49 years, male 338.0
GTEX-13CZV-0011-R9a-SM-5LZXT 60-69 years, male 337.4
GTEX-1I1HK-0011-R9a-SM-CMKHK 60-69 years, male 337.4
GTEX-1IDJH-0011-R9a-SM-ADEIN 70-79 years, male 334.5
GTEX-1B8L1-0011-R9b-SM-9WG5U 60-69 years, male 333.9
GTEX-1HR98-0011-R9b-SM-ARL79 60-69 years, male 333.7
GTEX-ZE9C-0011-R9a-SM-4WWCY 60-69 years, male 333.2
GTEX-1F6I4-0011-R9a-SM-CMKFU 60-69 years, male 333.2
GTEX-QVJO-0011-R9A-SM-2S1QH 60-69 years, female 332.6
GTEX-1LVAO-0011-R9a-SM-EZ6MY 60-69 years, male 331.6
GTEX-13N1W-0011-R9b-SM-5MR4R 70-79 years, male 328.6
GTEX-16NPV-0011-R9b-SM-79ONF 50-59 years, female 326.7
GTEX-12126-0011-R9b-SM-5BC6P 20-29 years, male 326.0
GTEX-15DDE-0011-R9b-SM-6M46U 50-59 years, female 323.8
GTEX-ZVZQ-0011-R9a-SM-51MRH 60-69 years, female 323.3
GTEX-145LU-0011-R9b-SM-5SI66 50-59 years, male 318.2
GTEX-12WSC-0011-R9a-SM-5GU4U 50-59 years, male 317.4
GTEX-13SLX-0011-R9b-SM-5SI6X 50-59 years, female 315.1
GTEX-1R46S-0011-R9a-SM-EZ6N7 60-69 years, female 314.5
GTEX-13OVJ-0011-R9b-SM-5L3GD 50-59 years, female 313.6
GTEX-NL4W-0011-R9a-SM-2I3G1 50-59 years, male 312.5
GTEX-11ONC-0011-R9b-SM-5NQ8J 60-69 years, male 310.6
GTEX-13NYS-0011-R9b-SM-5MR44 60-69 years, male 310.6
GTEX-13O1R-0011-R9b-SM-5KM33 60-69 years, male 310.4
GTEX-1GZ2Q-0011-R9a-SM-9WG7A 40-49 years, male 305.5
GTEX-1F88F-0011-R9b-SM-9WG7L 60-69 years, female 303.6
GTEX-1GN73-0011-R9a-SM-CKZO5 60-69 years, male 303.4
GTEX-139T4-0011-R9b-SM-5HL6S 50-59 years, female 303.3
GTEX-RU72-0011-R9A-SM-2TF67 50-59 years, female 300.5
GTEX-14E6C-0011-R9a-SM-6EU33 40-49 years, male 300.2
GTEX-12WSD-0011-R9a-SM-5GU6W 60-69 years, female 294.8
GTEX-1H23P-0011-R9a-SM-CM2T1 60-69 years, male 293.8
GTEX-13SLW-0011-R9a-SM-5O9BT 70-79 years, male 292.4
GTEX-13PL6-0011-R9b-SM-5O9CH 40-49 years, female 290.0
GTEX-11UD2-0011-R9b-SM-DO926 50-59 years, male 287.7
GTEX-13PLJ-0011-R9b-SM-5O9DV 60-69 years, female 287.6
GTEX-1GF9W-0011-R9b-SM-9WG7J 60-69 years, male 287.4
GTEX-14BMV-0011-R9b-SM-5ZZUA 50-59 years, male 285.2
GTEX-1I1GV-0011-R9b-SM-ARZLE 60-69 years, male 284.7
GTEX-13NZA-0011-R9b-SM-5MR5I 60-69 years, male 283.8
GTEX-148VJ-0011-R9b-SM-5SI77 70-79 years, male 283.2
GTEX-13VXU-0011-R9b-SM-5SI73 50-59 years, male 281.2
GTEX-ZF28-0011-R9a-SM-4WWDY 60-69 years, male 281.2
GTEX-NPJ8-0011-R9a-SM-2YUN5 40-49 years, male 280.7
GTEX-15ER7-0011-R9b-SM-6PALF 20-29 years, female 280.1
GTEX-1EWIQ-0011-R9a-SM-ARL8L 70-79 years, female 279.5
GTEX-1B933-0011-R9a-SM-79OOR 50-59 years, female 279.1
GTEX-13RTJ-0011-R9a-SM-5Q5AY 60-69 years, male 278.3
GTEX-1H1ZS-0011-R9a-SM-CM2SO 70-79 years, male 278.2
GTEX-ZAB4-0011-R9a-SM-4SOKG 40-49 years, male 277.6
GTEX-139UW-0011-R9b-SM-5LZYT 60-69 years, male 277.4
GTEX-14PN4-0011-R9a-SM-6LLH9 50-59 years, male 276.1
GTEX-1H2FU-0011-R9b-SM-CE6S4 60-69 years, female 274.3
GTEX-1IKJJ-0011-R9a-SM-ARZLI 60-69 years, male 274.1
GTEX-TSE9-0011-R9A-SM-3DB7Q 60-69 years, female 271.3
GTEX-13OW5-0011-R9b-SM-5O9CL 60-69 years, male 270.8
GTEX-QDT8-0011-R9A-SM-CYPRD 30-39 years, female 270.7
GTEX-14BIN-0011-R9a-SM-5SI76 50-59 years, female 268.8
GTEX-Q2AG-0011-R9A-SM-2HMJ6 40-49 years, female 267.6
GTEX-1GZHY-0011-R9a-SM-9WG5R 50-59 years, female 266.9
GTEX-13PVQ-0011-R9b-SM-5LU3B 50-59 years, male 266.4
GTEX-OXRO-0011-R9A-SM-3NB1X 60-69 years, female 264.5
GTEX-14JIY-0011-R9a-SM-6EU34 60-69 years, male 263.3
GTEX-147GR-0011-R9a-SM-5S2UY 60-69 years, male 261.4
GTEX-13OVL-0011-R9a-SM-5P9GX 50-59 years, male 260.9
GTEX-WL46-0011-R9A-SM-3MJFP 50-59 years, male 258.7
GTEX-YFC4-0011-R9a-SM-4SOK4 40-49 years, female 255.6
GTEX-1HBPM-0011-R9b-SM-ARL7C 60-69 years, female 253.0
GTEX-NPJ7-0011-R9a-SM-2TC5R 60-69 years, female 252.6
GTEX-12WSH-0011-R9b-SM-5LZUG 50-59 years, male 249.0
GTEX-14ABY-0011-R9a-SM-5PNZK 50-59 years, male 246.1
GTEX-14PJO-0011-R9b-SM-62LE9 60-69 years, male 246.0
GTEX-1A32A-0011-R9b-SM-7MGXD 50-59 years, female 244.0
GTEX-13JUV-0011-R9a-SM-5LZX3 40-49 years, female 243.5
GTEX-15G19-0011-R9b-SM-7KUEE 60-69 years, male 240.8
GTEX-1GTWX-0011-R9a-SM-ADEH4 60-69 years, male 240.4
GTEX-14BIL-0011-R9a-SM-5SI7A 50-59 years, male 239.9
GTEX-13N2G-0011-R9b-SM-5MR4E 60-69 years, male 238.4
GTEX-13S7M-0011-R9a-SM-5O9DW 60-69 years, female 238.1
GTEX-XMD1-0011-R9A-SM-4AT49 60-69 years, male 237.2
GTEX-15DCD-0011-R9b-SM-7KUED 70-79 years, female 236.2
GTEX-15DYW-0011-R9b-SM-6PALB 60-69 years, female 233.4
GTEX-16Z82-0011-R9a-SM-7DUFA 60-69 years, male 231.8
GTEX-13QJC-0011-R9b-SM-5PNX3 60-69 years, female 231.4
GTEX-1J1OQ-0011-R9b-SM-ARZMK 40-49 years, female 231.0
GTEX-13FXS-0011-R9a-SM-5K7UI 50-59 years, male 224.7
GTEX-17EVQ-0011-R9b-SM-79OJY 70-79 years, male 223.0
GTEX-T5JC-0011-R9A-SM-32PLV 20-29 years, male 216.6
GTEX-15EO6-0011-R9a-SM-6PALG 50-59 years, male 214.8
GTEX-OHPN-0011-R9A-SM-5TDEJ 60-69 years, female 213.3
GTEX-14PJM-0011-R9b-SM-6EU35 50-59 years, female 211.1
GTEX-R55E-0011-R9A-SM-2TC6C 20-29 years, male 210.6
GTEX-18464-0011-R9a-SM-731BK 50-59 years, male 202.0
GTEX-16XZZ-0011-R9b-SM-7DHKX 60-69 years, male 188.1
GTEX-15CHQ-0011-R9a-SM-6LLHX 60-69 years, male 183.5
GTEX-RNOR-0011-R9A-SM-2TF52 50-59 years, female 149.4
Show allShow less

SPINAL CORD - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

96.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Spinal cord
Scaled Tags Per Million: 96.6
FF:10181-103D1 60 years, female 119.0
FF:10159-103A6 76 years, female 74.3

SPINAL CORD - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

66.3
Pig sample Sample description nTPM
Dorsal spinal cord
nTPM: 57.9
Samples: 4

Max nTPM: 67.3
Min nTPM: 52.6
Sample A Female 52.6
Sample B Female 58.0
Sample C Male 67.3
Sample D Male 53.8
Ventral spinal cord
nTPM: 66.3
Samples: 4

Max nTPM: 80.7
Min nTPM: 55.5
Sample A Female 55.5
Sample B Female 72.9
Sample C Male 80.7
Sample D Male 56.1

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org