HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
RNA expressioni
Consensus:600.9 nTPM
HPA Brain:746.3 nTPM
GTEx:600.9 nTPM
FANTOM5:1546.3 Scaled Tags Per Million
Pig:1287.0 nTPM
Mouse:1536.1 nTPM
Allen mouse:24.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA041264Antibody HPA041271
Glial cells Not detectedNot detected
Neuronal cells MediumNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 746.3
Sample id Sample description nTPM
Hippocampus
nTPM: 667.1
1898 Male, age 80, left hemisphere 771.9
2621 Female, age 67, right hemisphere 676.3
2148 Female, age 91, left hemisphere 662.0
2529 Female, age 94, left hemisphere 641.8
1855 Male, age 76, left hemisphere 634.8
1911 Female, age 85, right hemisphere 615.7
Dentate gyrus
nTPM: 669.3
2530 Female, age 94, left hemisphere 793.5
2010 Male, age 76, both hemispheres 727.9
2246 Female, age 85, both hemispheres 662.2
1927 Female, age 91, both hemispheres 650.3
2528 Male, age 74, both hemispheres 637.1
2531 Female, age 67, both hemispheres 544.6
Entorhinal gyrus
nTPM: 642.0
2764 Male, age 80, right hemisphere 759.7
2117 Female, age 91, right hemisphere 722.3
1938 Female, age 85, left hemisphere 718.0
1787 Male, age 76, left hemisphere 635.0
2613 Female, age 94, left hemisphere 573.1
2686 Male, age 75, right hemisphere 444.1
Hippocampus, CA1
nTPM: 746.3
2749 Male, age 80, left hemisphere 1176.2
2527 Male, age 74, both hemispheres 710.4
1873 Female, age 85, both hemispheres 683.3
2082 Female, age 91, right hemisphere 589.5
2045 Male, age 76, both hemispheres 571.9
Hippocampus, CA2
nTPM: 678.9
1963 Male, age 80, left hemisphere 798.2
2249 Male, age 74, both hemispheres 712.8
1892 Male, age 76, both hemispheres 695.9
2437 Female, age 94, left hemisphere 684.0
2113 Female, age 91, right hemisphere 599.1
1940 Female, age 85, left hemisphere 583.9
Hippocampus, CA3
nTPM: 668.5
2137 Male, age 80, left hemisphere 970.2
1867 Male, age 76, both hemispheres 740.0
2436 Male, age 74, both hemispheres 657.9
2861 Female, age 67, both hemispheres 581.4
1891 Female, age 85, both hemispheres 532.0
2620 Female, age 94, left hemisphere 529.7
Parahippocampal cortex
nTPM: 645.4
2245 Female, age 91, both hemispheres 809.3
2532 Female, age 72, left hemisphere 732.6
1933 Female, age 85, both hemispheres 726.6
2250 Female, age 67, right hemisphere 704.0
1850 Male, age 80, both hemispheres 683.7
1990 Female, age 91, right hemisphere 666.0
2018 Male, age 76, both hemispheres 647.7
2622 Female, age 67, right hemisphere 501.4
2692 Male, age 74, both hemispheres 496.5
2693 Female, age 94, both hemispheres 486.0
Perirhinal gyrus
nTPM: 740.8
1847 Female, age 91, left hemisphere 841.6
2521 Female, age 94, right hemisphere 830.2
1794 Male, age 80, right hemisphere 793.2
1841 Female, age 85, right hemisphere 691.8
2848 Male, age 76, right hemisphere 547.4
Subiculum
nTPM: 662.8
1977 Female, age 85, both hemispheres 716.2
1901 Male, age 80, both hemispheres 699.4
2438 Female, age 94, left hemisphere 687.6
2042 Male, age 76, both hemispheres 654.4
2619 Male, age 74, both hemispheres 640.5
2729 Female, age 91, right hemisphere 578.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 600.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 600.9
Samples: 197

Max nTPM: 1438.4
Min nTPM: 256.1
Std nTPM: 175.7
Median nTPM: 570.4
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 1438.4
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 1283.6
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 1113.1
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 1081.5
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 982.2
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 981.8
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 974.8
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 945.7
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 923.5
GTEX-P44H-0011-R1A-SM-3NM8J 40-49 years, male 917.5
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 911.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 1546.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 1546.3
FF:10169-103B7 60 years, female 2042.8
FF:10153-102I9 76 years, female 1049.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 1287.0
Pig sample Sample description nTPM
Subiculum
nTPM: 1121.9
Samples: 4

Max nTPM: 1472.3
Min nTPM: 936.6
Sample A Female 1472.3
Sample B Female 1031.8
Sample C Male 1047.0
Sample D Male 936.6
Dorsal hippocampus
nTPM: 1287.0
Samples: 4

Max nTPM: 1731.4
Min nTPM: 1061.2
Sample A Female 1731.4
Sample B Female 1209.5
Sample C Male 1145.7
Sample D Male 1061.2
Entorhinal cortex
nTPM: 1041.8
Samples: 4

Max nTPM: 1175.1
Min nTPM: 868.6
Sample A Female 1175.1
Sample B Female 1011.1
Sample C Male 1112.3
Sample D Male 868.6
Ventral hippocampus
nTPM: 1143.5
Samples: 4

Max nTPM: 1381.9
Min nTPM: 813.1
Sample A Female 1161.3
Sample B Female 813.1
Sample C Male 1381.9
Sample D Male 1217.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 1536.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 1422.1
Samples: 4

Max nTPM: 1681.2
Min nTPM: 1282.2
Sample A Male 1327.7
Sample B Male 1282.2
Sample C Female 1397.4
Sample D Female 1681.2
Hippocampal formation
nTPM: 1536.1
Samples: 4

Max nTPM: 1619.3
Min nTPM: 1464.8
Sample A Male 1565.2
Sample B Male 1464.8
Sample C Female 1619.3
Sample D Female 1494.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 24.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 24.2
67792203 Antisense, RP_040920_01_D11, Mouse strain C57BL/6J (56 days, male) 24.2

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