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TISSUE PRIMARY DATA VAGINA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Vagina
Tissue proteome
Vagina
VAGINA - Expression summary
Protein expression
Vaginai

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Squamous epithelial cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:136.3 nTPM
GTEx:136.3 nTPM
FANTOM5:313.8 Scaled Tags Per Million

VAGINA - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA068431Antibody CAB012235
Squamous epithelial cells MediumMedium





VAGINA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

136.3
GTEx sample id Sample description nTPM
Vagina
Average nTPM: 136.3
Samples: 156

Max nTPM: 478.5
Min nTPM: 47.7
Std nTPM: 61.1
Median nTPM: 125.0
GTEX-131XG-2126-SM-5DUXG 50-59 years, female 478.5
GTEX-15ER7-2526-SM-7KUFW 20-29 years, female 403.4
GTEX-X8HC-2826-SM-46MWJ 50-59 years, female 368.2
GTEX-S4UY-1326-SM-4AD4X 40-49 years, female 290.6
GTEX-14AS3-1726-SM-5RQJV 40-49 years, female 278.1
GTEX-1A8FM-2426-SM-7IGPE 50-59 years, female 275.6
GTEX-11TTK-2726-SM-5GU58 60-69 years, female 271.4
GTEX-Y114-1926-SM-4TT8J 50-59 years, female 254.9
GTEX-11EM3-1826-SM-5A5KO 20-29 years, female 248.0
GTEX-X15G-1926-SM-4PQZQ 50-59 years, female 239.9
GTEX-1JN1M-2326-SM-ARZNG 60-69 years, female 231.9
GTEX-147F3-1526-SM-5SIAK 50-59 years, female 226.1
GTEX-S7SF-1426-SM-4AT5A 20-29 years, female 224.3
GTEX-RWS6-1726-SM-47JXP 60-69 years, female 223.7
GTEX-15SB6-1426-SM-7KUEM 50-59 years, female 211.9
GTEX-1117F-2526-SM-5GZY6 60-69 years, female 208.6
GTEX-WYVS-1426-SM-4ONCV 40-49 years, female 199.4
GTEX-QCQG-1226-SM-48U23 50-59 years, female 199.2
GTEX-1J8EW-2526-SM-CKZO2 60-69 years, female 195.5
GTEX-1ICG6-1626-SM-ARL81 70-79 years, female 194.2
GTEX-1LH75-1726-SM-DHXKZ 50-59 years, female 189.7
GTEX-PWN1-2526-SM-48TDS 40-49 years, female 183.1
GTEX-TML8-1126-SM-4DXSS 40-49 years, female 182.5
GTEX-1AMFI-1526-SM-73KVY 50-59 years, female 178.2
GTEX-ZV6S-1326-SM-59HJA 40-49 years, female 178.2
GTEX-17F9Y-2326-SM-7DUFP 70-79 years, female 170.0
GTEX-Q734-1426-SM-DTXFX 40-49 years, female 168.7
GTEX-ZQG8-1126-SM-51MRL 60-69 years, female 168.1
GTEX-WEY5-0826-SM-4LMIH 40-49 years, female 165.7
GTEX-18A7A-2826-SM-7LT8J 50-59 years, female 163.9
GTEX-UJHI-1326-SM-4IHJO 50-59 years, female 159.0
GTEX-ZE7O-2426-SM-57WD7 50-59 years, female 158.7
GTEX-1JMQL-2326-SM-CNNPV 50-59 years, female 158.1
GTEX-ZP4G-0826-SM-4WWF3 20-29 years, female 157.3
GTEX-N7MT-1926-SM-3LK5N 60-69 years, female 157.2
GTEX-Y8LW-1426-SM-5RQJJ 50-59 years, female 156.9
GTEX-ZVT3-2726-SM-5GU5X 60-69 years, female 156.8
GTEX-S4P3-1126-SM-4AD52 50-59 years, female 154.4
GTEX-ZC5H-2226-SM-4WAWS 40-49 years, female 154.2
GTEX-QVJO-2526-SM-CYPRA 60-69 years, female 151.9
GTEX-ZYY3-2626-SM-5N9DH 60-69 years, female 149.3
GTEX-U3ZN-0926-SM-4DXTU 30-39 years, female 148.2
GTEX-1HCU6-2326-SM-ACKXP 60-69 years, female 146.0
GTEX-146FH-2626-SM-5Q5E1 50-59 years, female 145.8
GTEX-TMMY-1926-SM-4DXUU 40-49 years, female 145.3
GTEX-13QBU-1726-SM-5IJFQ 40-49 years, female 145.0
GTEX-1GN1U-2426-SM-9KNTU 50-59 years, female 144.9
GTEX-13QIC-1826-SM-5J1MY 60-69 years, female 144.6
GTEX-113JC-1926-SM-5N9GE 50-59 years, female 144.4
GTEX-17JCI-2526-SM-7DHLB 60-69 years, female 143.0
GTEX-ZGAY-2226-SM-4YCCX 40-49 years, female 141.8
GTEX-11VI4-0726-SM-5GU5B 40-49 years, female 138.7
GTEX-12ZZX-1926-SM-5EGKC 40-49 years, female 138.7
GTEX-15UF6-2126-SM-6M46Z 70-79 years, female 138.6
GTEX-145LS-2526-SM-5TDC9 60-69 years, female 137.5
GTEX-W5WG-1026-SM-4LMIF 50-59 years, female 137.3
GTEX-NPJ7-2526-SM-EV79A 60-69 years, female 135.6
GTEX-SN8G-2626-SM-EXUQT 50-59 years, female 135.1
GTEX-1J1OQ-1826-SM-CL53R 40-49 years, female 134.2
GTEX-PLZ4-2726-SM-3P61A 50-59 years, female 132.0
GTEX-1R9JW-1426-SM-DTX9K 30-39 years, female 131.8
GTEX-P78B-2226-SM-3P5ZZ 40-49 years, female 131.5
GTEX-11P81-2126-SM-5HL6N 30-39 years, female 131.3
GTEX-1HFI7-1126-SM-A96S5 50-59 years, female 131.0
GTEX-Y3IK-2226-SM-4YCD4 50-59 years, female 130.9
GTEX-11DXX-1726-SM-5H11T 60-69 years, female 130.6
GTEX-13N11-1526-SM-5L3FL 50-59 years, female 130.2
GTEX-PX3G-2526-SM-48TZV 20-29 years, female 130.0
GTEX-1LNCM-1026-SM-E9U5D 50-59 years, female 130.0
GTEX-YJ8O-1226-SM-5P9JE 40-49 years, female 129.9
GTEX-T2IS-1926-SM-4DM74 20-29 years, female 129.8
GTEX-1PIEJ-1926-SM-EVYB7 20-29 years, female 129.2
GTEX-12WSJ-1326-SM-5GCOB 40-49 years, female 128.2
GTEX-TSE9-2526-SM-4DXUS 60-69 years, female 127.9
GTEX-12WSD-2926-SM-5LZUH 60-69 years, female 126.6
GTEX-1399U-1526-SM-5J2N7 50-59 years, female 125.6
GTEX-18D9A-1026-SM-7KFRU 30-39 years, female 125.3
GTEX-1399S-2326-SM-5K7YV 30-39 years, female 125.0
GTEX-1EWIQ-2326-SM-7IGNF 70-79 years, female 125.0
GTEX-SE5C-1126-SM-4BRWZ 40-49 years, female 123.6
GTEX-XUZC-1226-SM-4BRVJ 30-39 years, female 123.0
GTEX-P4PP-2526-SM-3P61P 30-39 years, female 122.2
GTEX-ZLWG-1126-SM-4WWFQ 50-59 years, female 121.5
GTEX-183WM-2126-SM-7LG4I 70-79 years, female 121.4
GTEX-OHPN-2426-SM-E9TI5 60-69 years, female 119.9
GTEX-XV7Q-1626-SM-4BRWC 40-49 years, female 119.4
GTEX-14DAQ-2326-SM-5S2QX 60-69 years, female 118.6
GTEX-13OVI-0926-SM-5J1MI 60-69 years, female 118.0
GTEX-PWCY-1726-SM-48TD3 20-29 years, female 117.8
GTEX-OHPK-2526-SM-3MJH9 50-59 years, female 116.5
GTEX-131YS-2426-SM-5J2OD 60-69 years, female 116.4
GTEX-1NUQO-1826-SM-E6CQU 20-29 years, female 115.9
GTEX-RU1J-1426-SM-46MUV 20-29 years, female 113.5
GTEX-YFC4-2926-SM-5IFJ8 40-49 years, female 112.2
GTEX-13PL7-2726-SM-5L3GB 60-69 years, female 112.0
GTEX-WRHU-2926-SM-4MVNQ 50-59 years, female 111.3
GTEX-14BMU-1926-SM-5S2QC 20-29 years, female 111.1
GTEX-1GF9U-1926-SM-7P8TZ 40-49 years, female 110.2
GTEX-1C475-0526-SM-793AC 40-49 years, female 110.0
GTEX-11I78-2026-SM-5987C 50-59 years, female 109.0
GTEX-16NPV-2526-SM-6M483 50-59 years, female 108.9
GTEX-S341-1226-SM-4AD5S 40-49 years, female 108.8
GTEX-1S5ZU-2626-SM-E9TII 20-29 years, female 107.9
GTEX-146FR-2426-SM-5NQAU 60-69 years, female 107.0
GTEX-1HBPM-2726-SM-9WYUA 60-69 years, female 106.6
GTEX-1IDJU-1026-SM-AHZ2U 60-69 years, female 106.2
GTEX-1I4MK-1726-SM-ARL7O 50-59 years, female 105.4
GTEX-11GSP-2226-SM-5HL5Q 60-69 years, female 105.2
GTEX-1F48J-2526-SM-7P8TU 50-59 years, female 103.1
GTEX-15DYW-2926-SM-6PANA 60-69 years, female 101.9
GTEX-14A5I-2726-SM-5SIB3 50-59 years, female 101.6
GTEX-13PVR-1426-SM-5S2PW 60-69 years, female 101.5
GTEX-1GMR8-2526-SM-7RHI9 50-59 years, female 101.0
GTEX-ZTPG-2226-SM-57WF9 20-29 years, female 100.4
GTEX-ZAK1-2426-SM-EXOHM 50-59 years, female 99.8
GTEX-T6MO-1226-SM-4DM5S 40-49 years, female 99.2
GTEX-14PJ6-1626-SM-6872D 60-69 years, female 99.1
GTEX-QDT8-2526-SM-48TYX 30-39 years, female 99.1
GTEX-XUW1-0326-SM-4BOOR 50-59 years, female 98.1
GTEX-1HBPH-2926-SM-9WPNX 40-49 years, female 98.0
GTEX-1GN1W-1526-SM-7P8TG 50-59 years, female 97.8
GTEX-13W3W-2326-SM-5LU4Y 60-69 years, female 95.0
GTEX-1CAMS-2326-SM-793CR 40-49 years, female 93.5
GTEX-1JN76-1526-SM-CNPPF 20-29 years, female 93.4
GTEX-1LVAM-1926-SM-E6CIM 50-59 years, female 93.2
GTEX-1HCUA-1026-SM-A9SMI 50-59 years, female 92.9
GTEX-11XUK-1326-SM-5EQM4 40-49 years, female 92.8
GTEX-11EMC-1926-SM-5A5JU 60-69 years, female 91.4
GTEX-1QP28-1426-SM-EVR4E 50-59 years, female 91.3
GTEX-15SHU-2926-SM-7KUKT 40-49 years, female 90.2
GTEX-1I1GT-1226-SM-B2LVK 60-69 years, female 89.6
GTEX-14PJM-2926-SM-69LOE 50-59 years, female 87.9
GTEX-ZXES-0626-SM-5E45P 30-39 years, female 87.2
GTEX-1LVAN-1626-SM-CNPQ7 50-59 years, female 86.9
GTEX-1LGOU-1126-SM-D3LAI 20-29 years, female 86.7
GTEX-14H4A-2426-SM-664OQ 40-49 years, female 85.3
GTEX-1F5PL-1826-SM-7P8PP 40-49 years, female 85.0
GTEX-ZVT2-0626-SM-5GICR 50-59 years, female 84.3
GTEX-15SDE-1726-SM-6LPJS 50-59 years, female 83.9
GTEX-14PN3-1626-SM-6AJAV 60-69 years, female 83.2
GTEX-1HCU8-2026-SM-9YFLE 60-69 years, female 83.1
GTEX-14JG6-0726-SM-69LQH 30-39 years, female 82.8
GTEX-13U4I-2026-SM-5LU3L 40-49 years, female 82.7
GTEX-13D11-1326-SM-5IJFY 50-59 years, female 82.4
GTEX-ZZPU-2226-SM-5EGIV 50-59 years, female 81.2
GTEX-1QCLZ-2226-SM-DTX7R 60-69 years, female 78.0
GTEX-14PKU-1326-SM-6871B 40-49 years, female 76.7
GTEX-1QPFJ-1626-SM-DTX7X 30-39 years, female 73.9
GTEX-145ME-1426-SM-5RQJS 40-49 years, female 73.6
GTEX-1MCYP-1326-SM-EV7AD 20-29 years, female 73.6
GTEX-ZYVF-0326-SM-5GIES 50-59 years, female 71.4
GTEX-1IE54-2626-SM-CMKFY 40-49 years, female 67.4
GTEX-16NGA-1626-SM-72D6M 40-49 years, female 62.0
GTEX-1LGRB-2126-SM-COH48 50-59 years, female 60.8
GTEX-OHPL-2526-SM-3MJGT 60-69 years, female 59.2
GTEX-1MCC2-1126-SM-EVYD6 30-39 years, female 47.7
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VAGINA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

313.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Vagina
Scaled Tags Per Million: 313.8
FF:10204-103F6 68 years, female 313.8

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