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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
h
m
l
n
Cells in glomeruli:
High
Cells in tubules:
Low
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
682.1
nTPM
HPA:
44.0
nTPM
GTEx:
682.1
nTPM
FANTOM5:
1147.0
Scaled Tags Per Million
KIDNEY - Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
Antibody HPA004337
Cells in glomeruli
High
Cells in tubules
Low
KIDNEY - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Average nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
44.0
Female, age 58
Kidney sample 55 nTPM: 40.3
Cell types%
Cells in tubules:
60
Cells in glomeruli:
20
Fibroblasts:
5
Other cell types:
15
Female, age 67
Kidney sample 56 nTPM: 51
Cell types%
Cells in tubules:
70
Cells in glomeruli:
15
Fibroblasts:
10
Other cell types:
5
Female, age 55
Kidney sample 57 nTPM: 69
Cell types%
Cells in tubules:
80
Cells in glomeruli:
10
Fibroblasts:
5
Other cell types:
5
Male, age 46
Kidney sample 58 nTPM: 63.8
Cell types%
Cells in tubules:
60
Cells in glomeruli:
25
Fibroblasts:
5
Other cell types:
10
Female, age 57
Kidney sample 358 nTPM: 28.9
Cell types%
Cells in tubules:
60
Cells in glomeruli:
10
Fibroblasts:
10
Other cell types:
20
Male, age 78
Kidney sample 377 nTPM: 45
Cell types%
Cells in tubules:
65
Cells in glomeruli:
10
Fibroblasts:
5
Other cell types:
20
Male, age 73
Kidney sample 380 nTPM: 37.7
Cell types%
Cells in tubules:
60
Cells in glomeruli:
10
Fibroblasts:
10
Other cell types:
20
Female, age 59
Kidney sample 394 nTPM: 45.7
Cell types%
Cells in tubules:
65
Cells in glomeruli:
10
Fibroblasts:
10
Other cell types:
15
Female, age 48
Kidney sample 414 nTPM: 14.6
Cell types%
Cells in tubules:
60
Cells in glomeruli:
5
Fibroblasts:
10
Other cell types:
25
KIDNEY - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
682.1
GTEx sample id
Sample description
nTPM
Kidney - Cortex Average nTPM: 634.0
Samples: 85
Max nTPM: 1625.9
Min nTPM: 191.8
Std nTPM: 305.4
Median nTPM: 565.3
GTEX-1PWST-2226-SM-EVR3G
70-79 years, male
1625.9
GTEX-NPJ8-2226-SM-3TW8D
40-49 years, male
1507.8
GTEX-13RTJ-2226-SM-5S2Q1
60-69 years, male
1344.8
GTEX-14C39-2126-SM-664OH
40-49 years, male
1334.7
GTEX-11TTK-1926-SM-5PNW8
60-69 years, female
1297.9
GTEX-1CB4J-1926-SM-7MGX8
60-69 years, male
1267.1
GTEX-17F97-1926-SM-7IGM4
50-59 years, male
1181.1
GTEX-1A3MW-2226-SM-73KUX
60-69 years, female
1060.9
GTEX-1HB9E-1826-SM-D4P33
50-59 years, male
1053.9
GTEX-1HCU7-1826-SM-A9G2A
50-59 years, male
998.3
GTEX-QDVN-1626-SM-48TZC
50-59 years, male
956.5
GTEX-1C6VQ-2326-SM-7IGN1
50-59 years, male
951.1
GTEX-1GF9W-1326-SM-7P8PX
60-69 years, male
933.6
GTEX-1J1OQ-1426-SM-AHZ3P
40-49 years, female
933.1
GTEX-1GN1U-2126-SM-AHZ4J
50-59 years, female
925.7
GTEX-1JMQK-1926-SM-CJI3B
60-69 years, male
913.5
GTEX-1F48J-2226-SM-7MXTN
50-59 years, female
906.3
GTEX-13O1R-2526-SM-5N9FW
60-69 years, male
888.5
GTEX-ZVZP-0926-SM-5GIDB
50-59 years, male
878.6
GTEX-1R9PO-1626-SM-E6CPT
60-69 years, female
858.1
GTEX-1I1GP-1926-SM-CNNQU
50-59 years, male
811.2
GTEX-1JJ6O-2526-SM-AHZ3J
60-69 years, male
789.4
GTEX-1AX8Z-2326-SM-731CR
60-69 years, male
785.8
GTEX-1H3VY-1926-SM-9JGHJ
50-59 years, male
764.3
GTEX-ZC5H-1726-SM-5HL7X
40-49 years, female
717.9
GTEX-1E2YA-1626-SM-7MGXS
50-59 years, male
712.4
GTEX-1OJC4-2326-SM-DTXA5
50-59 years, female
711.9
GTEX-1399S-0526-SM-5IJG8
30-39 years, female
682.7
GTEX-1JMPZ-1226-SM-ARU8Y
30-39 years, male
678.9
GTEX-O5YV-1226-SM-EV795
60-69 years, female
675.4
GTEX-1MUQO-2526-SM-E9TJN
60-69 years, male
635.0
GTEX-QDT8-1726-SM-EYYV6
30-39 years, female
626.6
GTEX-ZE9C-1426-SM-4WKGM
60-69 years, male
622.1
GTEX-147F4-2626-SM-5Q5CS
50-59 years, male
610.2
GTEX-1GMR3-2426-SM-7MXV2
40-49 years, male
608.2
GTEX-1GTWX-1826-SM-9QEHG
60-69 years, male
607.4
GTEX-1JMLX-1526-SM-AHZ3N
50-59 years, male
599.9
GTEX-1QP6S-1526-SM-EXUSG
40-49 years, male
598.9
GTEX-14C5O-2026-SM-5YYB1
60-69 years, male
593.1
GTEX-1LG7Y-2726-SM-D5OVW
50-59 years, male
585.3
GTEX-12696-0926-SM-5FQTV
60-69 years, male
578.4
GTEX-REY6-1826-SM-EAZAT
60-69 years, male
569.4
GTEX-145MN-0326-SM-5QGQI
30-39 years, male
565.3
GTEX-ZLFU-0926-SM-5P9F8
40-49 years, male
546.1
GTEX-15CHQ-2126-SM-6871M
60-69 years, male
541.8
GTEX-1A8FM-2026-SM-7P8RN
50-59 years, female
540.6
GTEX-T5JC-1526-SM-4DM68
20-29 years, male
537.2
GTEX-11GS4-2326-SM-5A5KS
60-69 years, male
525.7
GTEX-1N2DW-1826-SM-EAZ54
50-59 years, male
523.2
GTEX-1IKK5-0926-SM-A9G2U
60-69 years, male
513.5
GTEX-12WSG-0826-SM-5EQ5A
50-59 years, female
512.8
GTEX-ZYFG-1626-SM-5GZYY
60-69 years, female
509.9
GTEX-1497J-0826-SM-5NQAJ
60-69 years, male
499.1
GTEX-S33H-1426-SM-EZ6L7
30-39 years, male
481.3
GTEX-11OF3-1326-SM-5N9FJ
60-69 years, male
478.1
GTEX-ZDXO-0226-SM-4WKH7
60-69 years, male
471.0
GTEX-16MT8-1926-SM-7EPGL
60-69 years, female
463.3
GTEX-QLQW-1626-SM-CMKFE
30-39 years, male
459.4
GTEX-1N2EF-1426-SM-EXUSH
60-69 years, male
438.9
GTEX-Y5V5-1226-SM-EYYVP
60-69 years, female
435.9
GTEX-1H3NZ-2126-SM-9WPQ6
60-69 years, male
428.7
GTEX-XPVG-0526-SM-4B65N
50-59 years, male
421.2
GTEX-ZYT6-2226-SM-5GIC9
30-39 years, male
421.2
GTEX-13112-2126-SM-5GCO4
50-59 years, male
416.9
GTEX-13OVI-1126-SM-5KLZF
60-69 years, female
412.8
GTEX-17F96-1926-SM-7MGWY
70-79 years, male
410.3
GTEX-P4QS-1126-SM-3NMD5
60-69 years, male
392.4
GTEX-1K9T9-1826-SM-CXZK2
50-59 years, female
384.0
GTEX-13OW6-1826-SM-5N9F9
50-59 years, male
383.7
GTEX-1JMQJ-1726-SM-E9U4V
50-59 years, male
371.7
GTEX-1GF9V-1926-SM-9JGHE
60-69 years, male
370.5
GTEX-1BAJH-1826-SM-731DA
70-79 years, male
347.2
GTEX-1IL2V-1826-SM-ARU7R
70-79 years, male
338.8
GTEX-15DYW-2026-SM-6AJBD
60-69 years, female
333.1
GTEX-RN64-1626-SM-48FD7
50-59 years, male
331.0
GTEX-Y5V6-2026-SM-5IFHO
60-69 years, male
320.3
GTEX-14E6D-2526-SM-5YYA9
50-59 years, male
302.5
GTEX-13NYB-1726-SM-5N9G2
40-49 years, male
285.3
GTEX-1HBPI-2026-SM-CE6RZ
50-59 years, male
281.7
GTEX-17HHY-2326-SM-7KFSR
50-59 years, male
278.0
GTEX-1KWVE-0826-SM-CXZKO
30-39 years, male
271.5
GTEX-13OVL-1826-SM-5KLZR
50-59 years, male
268.7
GTEX-1NV8Z-2226-SM-EXOJ2
60-69 years, male
267.5
GTEX-1EKGG-2226-SM-7IGOA
60-69 years, male
234.6
GTEX-T6MN-1826-SM-EXOHN
50-59 years, male
191.8
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Kidney - Medulla Average nTPM: 682.1
Samples: 4
Max nTPM: 1082.0
Min nTPM: 327.6
Std nTPM: 285.6
Median nTPM: 659.4
GTEX-T5JC-1626-SM-EZ6KW
20-29 years, male
1082.0
GTEX-RU72-1926-SM-EAZ3F
50-59 years, female
800.5
GTEX-TKQ2-0626-SM-EZ6LB
50-59 years, male
518.3
GTEX-R55E-2026-SM-EZ6L1
20-29 years, male
327.6
KIDNEY - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
The Human Protein Atlas project is funded
