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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
390.4
nTPM
FANTOM5:
215.0
Scaled Tags Per Million
Allen mouse:
5.1
Expression energy
PONS - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
390.4
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 299.8
2188
Female, age 91, both hemispheres
332.8
2301
Female, age 85, both hemispheres
298.7
2090
Male, age 80, both hemispheres
291.9
1984
Male, age 76, both hemispheres
275.5
Dorsal cochlear nucleus nTPM: 301.5
2187
Female, age 91, both hemispheres
347.4
2802
Male, age 74, right hemisphere
338.6
2058
Male, age 76, both hemispheres
284.3
2378
Male, age 80, both hemispheres
275.1
2370
Male, age 61, both hemispheres
262.1
Dorsal tegmental nucleus nTPM: 319.2
2083
Male, age 80, both hemispheres
370.6
2358
Male, age 61, both hemispheres
318.0
2326
Male, age 74, both hemispheres
304.5
1936
Male, age 76, left hemisphere
283.7
Dorsolateral tegmental area nTPM: 315.3
2654
Male, age 80, both hemispheres
376.2
2751
Female, age 85, both hemispheres
343.6
2141
Male, age 76, both hemispheres
313.8
2337
Male, age 61, both hemispheres
285.5
2360
Male, age 74, both hemispheres
257.5
Kolliker-Fuse nucleus nTPM: 336.1
2163
Male, age 80, both hemispheres
374.7
2793
Female, age 91, left hemisphere
342.9
2315
Male, age 76, right hemisphere
290.8
Lateral lemniscal nuclei nTPM: 301.2
2169
Male, age 76, both hemispheres
399.8
2746
Female, age 85, left hemisphere
305.2
2453
Male, age 74, right hemisphere
294.1
2320
Female, age 91, left hemisphere
253.8
2036
Male, age 80, both hemispheres
252.9
Lateral parabrachial nucleus nTPM: 313.6
2139
Female, age 85, right hemisphere
350.4
2792
Male, age 76, both hemispheres
318.3
2013
Male, age 80, both hemispheres
302.7
2790
Male, age 61, both hemispheres
283.1
Lateral vestibular nucleus nTPM: 344.2
2184
Male, age 76, both hemispheres
345.9
2311
Male, age 80, both hemispheres
342.5
Locus coeruleus nTPM: 383.8
2014
Male, age 55, unknown
426.2
2123
Female, age 91, both hemispheres
425.1
2788
Male, age 74, unknown
421.5
2720
Male, age 74, both hemispheres
414.3
2162
Male, age 80, both hemispheres
355.6
2317
Female, age 72, unknown
342.4
1980
Male, age 76, both hemispheres
301.3
Medial parabrachial nucleus nTPM: 333.2
2170
Female, age 91, both hemispheres
395.6
2854
Male, age 80, both hemispheres
394.7
2156
Male, age 61, both hemispheres
297.8
2786
Male, age 76, both hemispheres
296.8
2463
Female, age 85, right hemisphere
281.1
Medial periolivary nuclei nTPM: 328.9
2171
Female, age 85, both hemispheres
408.4
2063
Male, age 76, both hemispheres
353.7
2791
Male, age 74, right hemisphere
338.2
2458
Female, age 91, both hemispheres
274.4
2081
Male, age 80, both hemispheres
269.6
Motor facial nucleus nTPM: 340.9
2697
Female, age 85, both hemispheres
410.7
2062
Male, age 76, both hemispheres
379.6
2365
Male, age 74, right hemisphere
335.4
2126
Male, age 61, both hemispheres
329.8
2795
Female, age 91, both hemispheres
304.5
2327
Male, age 80, both hemispheres
285.5
Motor trigeminal nucleus nTPM: 290.0
2335
Male, age 61, both hemispheres
301.4
2309
Male, age 76, both hemispheres
295.3
2560
Male, age 74, both hemispheres
292.0
2079
Male, age 80, both hemispheres
282.2
2321
Female, age 91, both hemispheres
279.1
Nuclei of the trapezoid body nTPM: 327.2
2159
Male, age 61, both hemispheres
403.0
1983
Male, age 76, both hemispheres
370.8
2735
Female, age 85, both hemispheres
344.0
2166
Male, age 80, both hemispheres
277.0
2368
Female, age 91, both hemispheres
241.2
Nucleus raphe magnus nTPM: 356.6
2160
Male, age 61, both hemispheres
477.1
2172
Female, age 85, both hemispheres
396.7
2051
Male, age 76, both hemispheres
358.0
2455
Male, age 74, both hemispheres
339.5
2328
Male, age 80, both hemispheres
308.1
2459
Female, age 91, both hemispheres
260.6
Paramedian reticular nucleus nTPM: 390.4
2050
Female, age 85, both hemispheres
464.2
2313
Male, age 61, both hemispheres
374.7
2052
Male, age 76, both hemispheres
371.5
2057
Male, age 80, both hemispheres
351.1
Pedunculopontine tegmental nucleus nTPM: 366.7
2334
Male, age 80, both hemispheres
378.1
2338
Male, age 61, both hemispheres
362.0
1921
Female, age 85, both hemispheres
360.1
Pontine nuclei nTPM: 341.2
1863
Male, age 55, unknown
409.8
2727
Male, age 61, right hemisphere
406.0
2787
Female, age 85, both hemispheres
380.2
1968
Male, age 76, left hemisphere
343.1
2109
Female, age 72, unknown
335.5
2454
Male, age 74, left hemisphere
325.9
2319
Female, age 91, both hemispheres
286.1
2115
Male, age 80, left hemisphere
242.9
Pontine raphe nucleus nTPM: 367.9
2853
Male, age 76, midline
370.2
2122
Female, age 85, midline
365.6
Posteroventral cochlear nucleus nTPM: 304.0
2752
Female, age 85, both hemispheres
369.7
2070
Male, age 76, both hemispheres
311.4
2341
Male, age 80, both hemispheres
308.3
2135
Female, age 91, both hemispheres
269.6
2371
Male, age 61, both hemispheres
261.2
Principal sensory trigeminal nucleus nTPM: 333.6
2158
Male, age 61, both hemispheres
387.9
2324
Male, age 76, both hemispheres
339.5
2008
Male, age 80, left hemisphere
326.7
2367
Female, age 91, left hemisphere
280.0
Reticular pontine nucleus, caudal nTPM: 319.6
2092
Male, age 76, both hemispheres
341.6
2559
Male, age 74, both hemispheres
319.2
2457
Female, age 91, both hemispheres
316.3
2332
Male, age 80, right hemisphere
301.3
Reticular pontine nucleus, oral nTPM: 352.4
2361
Male, age 74, both hemispheres
413.8
1939
Male, age 80, both hemispheres
366.4
2012
Female, age 85, both hemispheres
359.0
2167
Male, age 76, both hemispheres
325.6
2366
Female, age 91, both hemispheres
297.1
Reticulotegmental nucleus nTPM: 334.9
2322
Female, age 91, both hemispheres
369.0
2325
Male, age 76, both hemispheres
356.2
2333
Male, age 80, both hemispheres
320.1
2452
Male, age 74, both hemispheres
294.2
Spinal trigeminal nucleus, oral nTPM: 320.8
2164
Male, age 80, both hemispheres
356.0
2737
Female, age 85, both hemispheres
325.5
1978
Male, age 76, both hemispheres
280.9
Subcoeruleus area nTPM: 316.9
1958
Male, age 80, both hemispheres
383.3
2323
Female, age 91, left hemisphere
383.2
2369
Female, age 85, left hemisphere
314.1
2089
Male, age 76, left hemisphere
262.3
2451
Male, age 74, both hemispheres
241.8
Superior olive nTPM: 323.0
1875
Female, age 85, both hemispheres
393.3
2020
Male, age 76, both hemispheres
338.3
2364
Male, age 74, right hemisphere
308.2
2329
Male, age 80, right hemisphere
289.3
2561
Female, age 91, both hemispheres
285.8
Ventral periolivary nuclei nTPM: 330.0
2130
Female, age 85, both hemispheres
353.0
2023
Male, age 76, both hemispheres
347.6
2165
Male, age 80, both hemispheres
346.1
2794
Female, age 91, left hemisphere
273.2
Ventrolateral tegmental area, A5 NE cell group nTPM: 328.0
2840
Female, age 85, both hemispheres
429.6
2359
Male, age 61, both hemispheres
347.3
2449
Male, age 74, both hemispheres
339.6
1959
Male, age 76, both hemispheres
322.2
2161
Male, age 80, both hemispheres
286.1
2456
Female, age 91, both hemispheres
243.2
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.
The Human Protein Atlas project is funded
