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RPS23
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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
GTEx:723.5 nTPM
FANTOM5:328.2 Scaled Tags Per Million
Pig:0.6 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA054853
Glial cells Not detected
Neuronal cells Medium



CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

723.5
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 723.5
Samples: 246

Max nTPM: 1607.2
Min nTPM: 321.6
Std nTPM: 208.6
Median nTPM: 689.3
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 1607.2
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 1569.0
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 1488.6
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 1300.3
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 1273.7
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 1250.6
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 1244.8
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 1238.7
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 1219.4
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 1182.9
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 1173.3
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 1134.8
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 1113.1
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 1104.6
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 1081.3
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 1073.4
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 1058.1
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 1048.1
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 1045.2
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 1044.9
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 1014.1
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 1012.0
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 1009.0
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 998.4
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 994.0
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 983.3
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 979.3
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 978.6
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 972.8
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 955.0
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 949.7
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 947.9
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 942.0
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 925.5
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 920.1
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 917.9
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 902.9
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 899.1
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 891.2
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 886.5
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 885.0
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 879.8
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 878.8
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 878.0
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 873.8
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 871.6
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 864.2
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 863.1
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 862.7
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 862.4
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 857.0
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 853.7
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 853.3
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 846.2
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 837.7
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 837.3
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 836.6
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 831.5
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 829.9
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 829.3
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 822.8
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 818.6
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 814.5
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 814.4
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 814.0
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 812.3
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 812.3
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 812.1
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 806.0
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 805.9
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 802.3
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 802.3
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 802.2
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 794.1
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 789.1
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 785.1
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 781.9
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 781.3
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 779.9
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 778.1
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 775.6
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 773.8
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 772.2
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 771.4
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 771.2
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 771.0
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 770.7
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 766.4
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 766.2
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 765.5
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 761.7
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 761.5
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 755.2
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 755.1
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 753.8
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 751.6
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 751.1
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 747.7
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 745.8
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 743.9
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 740.1
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 734.2
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 731.8
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 731.8
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 730.9
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 730.7
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 728.9
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 728.1
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 728.0
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 726.5
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 721.0
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 720.6
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 719.1
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 707.4
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 701.1
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 699.3
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 696.8
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 692.7
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 692.0
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 691.1
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 690.1
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 689.8
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 689.6
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 689.0
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 687.9
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 685.1
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 683.7
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 683.7
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 683.5
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 682.7
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 681.8
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 680.3
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 679.9
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 672.6
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 669.2
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 666.9
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 666.5
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 664.4
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 661.9
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 661.4
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 658.1
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 657.8
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 656.1
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 656.0
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 654.0
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 653.6
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 650.8
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 649.0
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 643.3
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 643.2
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 639.8
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 638.4
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 636.6
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 633.0
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 631.9
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 626.6
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 624.9
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 623.5
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 622.5
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 620.0
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 619.7
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 615.7
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 614.5
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 608.7
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 607.9
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 605.4
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 602.8
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 601.8
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 599.4
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 598.4
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 597.1
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 595.1
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 594.5
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 589.3
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 586.7
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 583.9
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 579.8
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 579.8
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 578.3
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 577.6
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 576.5
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 575.8
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 575.7
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 574.5
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 573.9
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 573.3
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 573.0
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 570.2
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 569.7
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 566.4
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 565.6
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 562.8
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 561.2
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 559.4
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 557.8
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 553.8
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 552.1
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 550.8
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 550.4
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 546.8
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 544.6
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 541.3
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 540.5
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 534.8
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 534.7
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 534.4
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 532.4
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 531.9
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 531.3
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 530.5
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 524.7
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 521.2
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 518.2
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 517.0
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 515.4
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 513.9
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 513.1
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 510.1
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 510.0
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 509.2
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 506.2
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 505.1
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 499.1
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 498.0
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 494.5
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 493.0
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 490.4
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 487.4
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 483.3
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 482.1
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 480.3
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 479.4
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 478.3
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 468.9
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 455.7
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 448.5
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 448.2
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 447.2
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 443.8
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 438.1
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 423.7
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 396.5
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 394.7
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 373.4
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 354.3
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 321.6
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

328.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 328.2
FF:10164-103B2 76 years, female 328.2

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

0.6
Pig sample Sample description nTPM
Caudate
nTPM: 0.6
Samples: 4

Max nTPM: 1.6
Min nTPM: 0.0
Sample A Female 0.0
Sample B Female 0.0
Sample C Male 0.8
Sample D Male 1.6

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