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RPS23
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TISSUE PRIMARY DATA RETINA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
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VALIDATION
Dictionary
Tissue proteome
Eye
Retina
RETINA - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:455.2 nTPM
GTEx:455.2 nTPM
FANTOM5:391.5 Scaled Tags Per Million
Pig:1.3 nTPM

RETINA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

455.2
GTEx sample id Sample description nTPM
Retina
Average nTPM: 455.2
Samples: 105

Max nTPM: 646.5
Min nTPM: 171.1
Std nTPM: 94.5
Median nTPM:
246_1 77 years, male 646.5
229_1 69 years, female 642.2
384_1 83 years, male 641.1
355_1 70 years, female 631.1
237_1 82 years, male 627.6
389_1 86 years, female 620.0
452_1 88 years, female 615.0
321_1 62 years, female 612.6
396_1 62 years, male 592.3
379_1 60 years, male 583.5
347_1 72 years, male 574.2
35_1 74 years, female 572.9
17_1 71 years, male 569.1
153_1 70 years, female 562.3
377_1 82 years, female 555.0
348_1 84 years, male 544.1
526_1 61 years, male 544.0
375_1 74 years, female 541.7
386_1 76 years, male 535.2
2_1 77 years, female 531.4
353_1 82 years, female 529.4
322_1 76 years, male 528.0
447_1 81 years, male 527.5
217_1 76 years, male 525.9
320_1 89 years, female 522.3
376_1 75 years, female 513.4
99_1 64 years, male 509.6
81_1 67 years, male 506.3
126_1 63 years, male 505.0
4_1 88 years, female 503.1
352_1 62 years, male 495.3
6_1 73 years, female 490.4
307_1 66 years, female 487.6
109_1 81 years, female 487.0
162_1 79 years, female 486.1
394_1 75 years, female 483.6
317_1 60 years, male 482.0
354_1 81 years, female 482.0
218_1 71 years, female 481.4
405_1 91 years, male 480.0
120_1 70 years, female 479.3
350_1 84 years, female 478.5
351_1 91 years, male 477.6
18_1 88 years, male 476.8
319_1 81 years, male 473.6
172_1 72 years, female 469.9
315_1 62 years, female 468.0
265_1 87 years, male 467.7
404_1 82 years, female 467.2
173_1 67 years, male 457.6
137_1 83 years, male 457.2
316_1 62 years, male 455.3
177_1 74 years, male 455.0
499_1 55 years, female 454.8
356_1 87 years, female 453.5
311_1 78 years, male 449.7
41_1 94 years, female 444.9
517_1 88 years, male 444.8
119_1 70 years, female 443.9
503_1 68 years, male 442.6
318_1 68 years, male 441.2
468_1 89 years, male 433.7
314_1 67 years, male 433.4
251_1 78 years, male 431.5
189_1 76 years, male 431.2
291_1 76 years, male 430.2
139_1 64 years, female 430.1
163_1 78 years, male 430.0
145_1 84 years, male 426.2
89_1 63 years, male 424.2
293_1 68 years, female 423.3
264_1 73 years, female 418.7
42_1 85 years, male 417.8
292_1 71 years, male 415.9
266_1 85 years, male 415.8
115_1 83 years, male 415.3
518_1 75 years, female 411.2
335_1 73 years, female 410.9
324_1 76 years, male 410.8
295_1 61 years, female 406.7
406_1 79 years, male 405.5
495_1 57 years, female 401.1
254_1 77 years, female 400.5
243_1 75 years, male 399.0
425_1 59 years, female 396.2
117_1 61 years, male 395.6
286_1 68 years, female 391.3
349_1 83 years, male 387.2
32_1 67 years, male 386.0
480_1 63 years, male 384.4
308_1 70 years, female 381.1
142_1 61 years, female 367.0
506_1 65 years, male 352.8
9_1 66 years, female 329.8
501_1 88 years, male 328.7
288_1 66 years, female 323.9
43_1 64 years, female 320.8
466_1 57 years, female 314.6
149_1 88 years, male 291.6
415_1 77 years, female 290.2
414_1 84 years, female 281.8
313_1 79 years, female 278.9
413_1 59 years, female 199.6
491_1 89 years, female 176.2
490_1 67 years, female 171.1
Show allShow less

RETINA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

391.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Retina
Scaled Tags Per Million: 391.5
FF:10030-101E3 24-65 years, mixed 391.5

RETINA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1.3
Pig sample Sample description nTPM
Retina
nTPM: 1.3
Samples: 4

Max nTPM: 1.8
Min nTPM: 0.7
Sample A Female 1.2
Sample B Female 1.8
Sample C Male 0.7
Sample D Male 1.4

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