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RPS23
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TISSUE PRIMARY DATA SMALL INTESTINE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Small intestine
Tissue proteome
Intestine
SMALL INTESTINE - Expression summary
Protein expression
Small intestinei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glandular cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:1390.0 nTPM
HPA:821.2 nTPM
GTEx:1390.0 nTPM
FANTOM5:806.7 Scaled Tags Per Million

SMALL INTESTINE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA054853
Glandular cells Medium



SMALL INTESTINE - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Average nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

821.2
overview
Male, age 65
Small intestine sample 232
nTPM: 1061.1
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40

overview
Male, age 39
Small intestine sample 233
nTPM: 723.5
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55

overview
Male, age 68
Small intestine sample 234
nTPM: 732.5
Cell types%
Glandular cells:
30

Smooth muscle cells:
15

Other cell types:
55

N/A
Male, age 85
Small intestine sample 235
nTPM: 767.6

SMALL INTESTINE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1390.0
GTEx sample id Sample description nTPM
Small Intestine - Terminal Ileum
Average nTPM: 1390.0
Samples: 187

Max nTPM: 2983.2
Min nTPM: 697.3
Std nTPM: 413.5
Median nTPM: 1357.6
GTEX-1NSGN-2126-SM-DPRYN 50-59 years, male 2983.2
GTEX-1EMGI-2826-SM-7IGMR 60-69 years, male 2933.4
GTEX-1RAZQ-2226-SM-DPRZR 30-39 years, male 2700.7
GTEX-1PIEJ-1526-SM-E6CP8 20-29 years, female 2521.1
GTEX-1MGNQ-2326-SM-EV7BG 40-49 years, male 2507.0
GTEX-183FY-1626-SM-793D8 20-29 years, male 2387.7
GTEX-11TUW-1926-SM-5BC58 60-69 years, male 2299.4
GTEX-14PK6-1626-SM-6871I 70-79 years, female 2299.0
GTEX-11VI4-1626-SM-5EQKO 40-49 years, female 2220.5
GTEX-1GL5R-2026-SM-7MKHP 50-59 years, male 2203.4
GTEX-1JJE9-2226-SM-CXZJM 70-79 years, male 2163.5
GTEX-13W3W-2026-SM-5K7UL 60-69 years, female 2150.2
GTEX-1GMR3-2726-SM-7MKFB 40-49 years, male 2117.3
GTEX-1399U-2126-SM-5IFEZ 50-59 years, female 1965.2
GTEX-1R9K4-2326-SM-E6CRB 60-69 years, male 1954.2
GTEX-14XAO-1926-SM-6ETZO 60-69 years, female 1943.9
GTEX-1IKOE-1926-SM-ARU7V 30-39 years, female 1926.6
GTEX-1QP28-1726-SM-E6CRK 50-59 years, female 1920.7
GTEX-16A39-1426-SM-6LLI6 30-39 years, female 1870.5
GTEX-VUSG-1726-SM-4KKZL 50-59 years, male 1844.9
GTEX-148VJ-2226-SM-5NQ9M 70-79 years, male 1826.8
GTEX-Y5LM-1626-SM-4VDTB 40-49 years, female 1824.4
GTEX-WRHK-1026-SM-4MVOD 20-29 years, female 1815.7
GTEX-13FH7-1226-SM-5IJFK 50-59 years, female 1809.9
GTEX-11P82-0826-SM-5P9GU 20-29 years, male 1791.2
GTEX-1PDJ9-1826-SM-E9U66 20-29 years, male 1767.7
GTEX-1RAZA-1826-SM-DTXA2 20-29 years, male 1759.8
GTEX-1S5ZA-1326-SM-EV7BB 20-29 years, male 1737.9
GTEX-1OJC3-1626-SM-E9U65 20-29 years, male 1730.6
GTEX-X15G-1426-SM-4PQZK 50-59 years, female 1723.4
GTEX-1LGOU-1426-SM-D3L8N 20-29 years, female 1719.6
GTEX-1H11D-2526-SM-9JGGU 40-49 years, male 1713.4
GTEX-WH7G-1626-SM-4LVMY 40-49 years, male 1704.3
GTEX-1LH75-1926-SM-DIPGD 50-59 years, female 1703.3
GTEX-1QPFJ-2626-SM-DPRZU 30-39 years, female 1700.2
GTEX-1CB4F-1826-SM-7MGXI 60-69 years, male 1687.4
GTEX-18QFQ-1626-SM-72D7H 30-39 years, male 1684.8
GTEX-14PKU-1626-SM-6871C 40-49 years, female 1663.0
GTEX-1F75I-2526-SM-9WPOZ 40-49 years, male 1647.0
GTEX-1LBAC-1526-SM-CXZKU 20-29 years, male 1631.5
GTEX-Y3I4-1326-SM-4TT8Z 50-59 years, male 1618.0
GTEX-1L5NE-1826-SM-EV79T 50-59 years, male 1616.9
GTEX-13O61-1326-SM-5KM31 60-69 years, male 1602.3
GTEX-11XUK-1426-SM-5EQMG 40-49 years, female 1601.1
GTEX-ZLFU-1526-SM-4WWBT 40-49 years, male 1593.3
GTEX-1H1DE-1426-SM-9JGHV 20-29 years, male 1593.2
GTEX-16NGA-1126-SM-7KFSY 40-49 years, female 1589.1
GTEX-15DZA-0826-SM-6AJBF 30-39 years, female 1582.5
GTEX-12BJ1-1926-SM-5HL9Z 60-69 years, male 1579.8
GTEX-Y5V5-1826-SM-4VDS5 60-69 years, female 1578.7
GTEX-ZF29-1626-SM-4WKFJ 60-69 years, female 1562.6
GTEX-1R9JW-1926-SM-EVR4J 30-39 years, female 1558.9
GTEX-ZAB5-1526-SM-5HL9P 50-59 years, male 1553.9
GTEX-145ME-0926-SM-5O9AR 40-49 years, female 1549.0
GTEX-VJYA-0926-SM-4KL1N 60-69 years, male 1545.2
GTEX-14E6E-1626-SM-5RQI7 30-39 years, male 1541.9
GTEX-WEY5-1526-SM-4LMJF 40-49 years, female 1540.2
GTEX-139T6-1026-SM-5IJGC 50-59 years, male 1532.5
GTEX-1KXAM-2026-SM-DHXKI 60-69 years, male 1529.0
GTEX-UPK5-2026-SM-4JBIM 40-49 years, male 1527.2
GTEX-1QW4Y-1226-SM-EWRMY 30-39 years, male 1525.7
GTEX-ZC5H-2326-SM-4WAYT 40-49 years, female 1522.7
GTEX-1RAZR-1826-SM-E6CRE 40-49 years, male 1514.0
GTEX-WFJO-0926-SM-4LVM2 30-39 years, male 1499.0
GTEX-13QBU-1926-SM-5IJEW 40-49 years, female 1498.7
GTEX-17MFQ-1026-SM-7KFSZ 20-29 years, male 1496.9
GTEX-1192X-2526-SM-59868 50-59 years, male 1493.7
GTEX-1B8KZ-1126-SM-7IGLX 50-59 years, male 1493.3
GTEX-1HSMQ-2226-SM-C1YRD 50-59 years, male 1493.2
GTEX-1C475-1426-SM-793CH 40-49 years, female 1489.6
GTEX-11NSD-1726-SM-5N9C3 20-29 years, male 1488.9
GTEX-13OVI-1926-SM-5IJCG 60-69 years, female 1481.1
GTEX-1K9T9-2726-SM-D4P3E 50-59 years, female 1478.5
GTEX-1S82Z-1826-SM-E9TIK 30-39 years, female 1476.9
GTEX-ZEX8-1826-SM-57WBH 50-59 years, male 1470.7
GTEX-XMK1-1826-SM-4B66F 40-49 years, male 1468.8
GTEX-13NYB-1826-SM-5J1N3 40-49 years, male 1467.4
GTEX-17KNJ-1626-SM-718AL 50-59 years, male 1446.7
GTEX-12WSK-1526-SM-5CVNO 40-49 years, female 1444.3
GTEX-117YX-0326-SM-5GICL 50-59 years, male 1439.1
GTEX-131XE-0926-SM-5HL7J 50-59 years, male 1420.7
GTEX-ZA64-1226-SM-5HL7B 20-29 years, male 1401.7
GTEX-139YR-2226-SM-5IFFW 50-59 years, male 1396.4
GTEX-1I1GT-1826-SM-ARZLW 60-69 years, female 1390.6
GTEX-ZTPG-2626-SM-57WFX 20-29 years, female 1388.0
GTEX-13RTK-0826-SM-5Q5C6 20-29 years, male 1383.7
GTEX-15EU6-1826-SM-7PC1W 50-59 years, male 1383.1
GTEX-ZQUD-0926-SM-57WE3 30-39 years, male 1380.9
GTEX-1R7EV-1226-SM-DTX82 40-49 years, male 1374.8
GTEX-14BMU-1426-SM-5TDE5 20-29 years, female 1373.4
GTEX-1OKEX-1126-SM-DTXEB 60-69 years, male 1369.9
GTEX-XPVG-1726-SM-4B65W 50-59 years, male 1367.7
GTEX-1GMR2-1026-SM-7MKHJ 50-59 years, male 1363.5
GTEX-1JMQK-2426-SM-CXZJU 60-69 years, male 1357.6
GTEX-Y3IK-1726-SM-4YCCR 50-59 years, female 1356.0
GTEX-13113-1226-SM-5EGHT 60-69 years, female 1347.7
GTEX-ZVP2-1726-SM-5GU5P 50-59 years, male 1342.8
GTEX-1BAJH-2526-SM-7IGOT 70-79 years, male 1335.6
GTEX-Z9EW-0926-SM-5CVMM 40-49 years, male 1334.2
GTEX-1AX8Z-2526-SM-731E3 60-69 years, male 1331.9
GTEX-1QP2A-2426-SM-EXOJA 50-59 years, male 1330.7
GTEX-11DXZ-1326-SM-5H11X 50-59 years, male 1321.3
GTEX-ZLWG-1626-SM-DNZZ1 50-59 years, female 1307.9
GTEX-131XG-1726-SM-5LZUR 50-59 years, female 1307.1
GTEX-1R9PM-1626-SM-DPRY9 20-29 years, male 1299.7
GTEX-13111-1426-SM-5DUW3 50-59 years, male 1278.4
GTEX-Y114-1426-SM-4TT6W 50-59 years, female 1274.9
GTEX-1399R-2026-SM-5K7WN 30-39 years, male 1268.2
GTEX-ZG7Y-1926-SM-DNZZ5 50-59 years, male 1265.7
GTEX-14C39-1826-SM-5ZZW4 40-49 years, male 1254.4
GTEX-14PKV-2026-SM-6AJ9A 20-29 years, female 1241.9
GTEX-1J8QM-1026-SM-C1YQA 60-69 years, female 1235.3
GTEX-1JN76-1126-SM-C1YRL 20-29 years, female 1231.4
GTEX-1MUQO-2426-SM-EAZ5A 60-69 years, male 1217.0
GTEX-ZZ64-0526-SM-5GZXM 20-29 years, male 1208.0
GTEX-18A66-2526-SM-7KFTZ 60-69 years, male 1205.7
GTEX-ZPIC-2326-SM-57WDW 40-49 years, female 1204.1
GTEX-1QCLZ-2126-SM-EWRNC 60-69 years, female 1203.9
GTEX-13CF3-1226-SM-5LZXN 60-69 years, female 1199.8
GTEX-ZP4G-1626-SM-57WGD 20-29 years, female 1194.6
GTEX-11I78-1126-SM-5A5K5 50-59 years, female 1183.7
GTEX-ZXES-1526-SM-5NQ95 30-39 years, female 1182.6
GTEX-WYJK-1526-SM-4ONCW 50-59 years, male 1180.1
GTEX-14PJ3-1326-SM-664O7 50-59 years, male 1176.7
GTEX-13X6H-1826-SM-7EWCZ 50-59 years, female 1175.5
GTEX-111CU-1326-SM-5NQ8L 50-59 years, male 1171.3
GTEX-1JK1U-1226-SM-CNNPN 60-69 years, male 1167.3
GTEX-ZYFG-2026-SM-5E43Y 60-69 years, female 1166.9
GTEX-WFG8-1626-SM-4LVMB 20-29 years, male 1165.1
GTEX-1CAMR-0826-SM-7MKFK 20-29 years, male 1164.3
GTEX-11DXX-1626-SM-5H11H 60-69 years, female 1164.2
GTEX-16AAH-1426-SM-7KFTR 50-59 years, male 1161.5
GTEX-1R9K5-2026-SM-E6CPS 50-59 years, male 1132.9
GTEX-YEC4-1726-SM-4W21E 40-49 years, male 1126.3
GTEX-1B8KE-1726-SM-7IGMN 50-59 years, male 1121.9
GTEX-ZF2S-1726-SM-57WFT 50-59 years, female 1117.7
GTEX-131XF-1326-SM-5GCMQ 60-69 years, male 1105.5
GTEX-WFON-1526-SM-4LVMP 40-49 years, male 1098.9
GTEX-1399S-2026-SM-5KM4B 30-39 years, female 1084.5
GTEX-XBED-1426-SM-4AT4G 60-69 years, male 1083.9
GTEX-11LCK-1926-SM-5A5KE 30-39 years, male 1082.4
GTEX-Y111-2226-SM-4SOJB 50-59 years, male 1077.3
GTEX-145LT-1026-SM-5LU9O 40-49 years, male 1076.8
GTEX-WFG7-1726-SM-4LVME 20-29 years, male 1072.6
GTEX-ZQG8-2526-SM-57WEQ 60-69 years, female 1052.9
GTEX-1C64O-2526-SM-79ONO 60-69 years, male 1050.0
GTEX-15G1A-1726-SM-6LPI4 30-39 years, male 1043.2
GTEX-1497J-1926-SM-5TDCC 60-69 years, male 1038.9
GTEX-ZTX8-0526-SM-59HLD 20-29 years, male 1037.2
GTEX-1R7EU-1326-SM-E6CQ6 60-69 years, male 1033.9
GTEX-16MTA-1526-SM-6LPJB 50-59 years, male 1028.5
GTEX-11P7K-1626-SM-5GU63 30-39 years, male 1020.2
GTEX-17HHE-1726-SM-79OKT 50-59 years, male 1014.4
GTEX-ZVT2-2126-SM-5NQ93 50-59 years, female 1011.5
GTEX-14DAR-1426-SM-5RQIR 50-59 years, male 1005.5
GTEX-13O21-1026-SM-5IJDU 50-59 years, male 1005.2
GTEX-11EQ9-1326-SM-5985X 30-39 years, male 1004.3
GTEX-WHSB-1026-SM-4M1XN 50-59 years, male 979.9
GTEX-Y9LG-1626-SM-5IFHM 30-39 years, male 976.9
GTEX-XXEK-1026-SM-4BRUW 50-59 years, male 974.6
GTEX-XGQ4-1326-SM-4GIDU 50-59 years, male 972.6
GTEX-14PN3-2026-SM-68729 60-69 years, female 970.7
GTEX-133LE-1426-SM-5IFH1 20-29 years, female 967.1
GTEX-X5EB-1626-SM-4E3IV 40-49 years, male 961.5
GTEX-YB5E-1526-SM-5IFIE 40-49 years, male 939.3
GTEX-14PJN-0826-SM-686ZL 30-39 years, male 921.6
GTEX-13FTW-2026-SM-5IJE2 40-49 years, male 919.7
GTEX-144GM-1026-SM-79OKU 20-29 years, male 917.2
GTEX-1CAMS-2426-SM-7DHMV 40-49 years, female 911.8
GTEX-13D11-0726-SM-5LZZB 50-59 years, female 909.3
GTEX-XAJ8-0526-SM-47JYK 40-49 years, male 894.4
GTEX-WQUQ-2426-SM-4MVNW 60-69 years, male 888.0
GTEX-XUZC-1426-SM-4BRV3 30-39 years, female 883.2
GTEX-14PJ6-1726-SM-6AJBN 60-69 years, female 876.7
GTEX-ZLV1-1126-SM-4WWBW 60-69 years, female 855.2
GTEX-13PL7-2626-SM-5IFH4 60-69 years, female 852.9
GTEX-1AMFI-1926-SM-731F2 50-59 years, female 849.4
GTEX-WY7C-1826-SM-4ONCE 50-59 years, male 841.0
GTEX-1122O-1326-SM-5H11F 60-69 years, female 826.3
GTEX-ZDTT-1726-SM-5HL69 60-69 years, male 824.7
GTEX-YF7O-1826-SM-5IFIU 50-59 years, male 797.8
GTEX-ZPCL-1726-SM-57WEO 60-69 years, female 787.4
GTEX-111YS-1426-SM-5GID8 60-69 years, male 784.4
GTEX-ZTSS-0926-SM-59865 40-49 years, male 779.7
GTEX-YFCO-1326-SM-664NV 40-49 years, male 748.2
GTEX-ZVZP-1826-SM-5GZXB 50-59 years, male 743.6
GTEX-1J8Q3-2526-SM-CNNQ4 60-69 years, male 697.3
Show allShow less

SMALL INTESTINE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

806.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Small intestine
Scaled Tags Per Million: 806.7
FF:10024-101D6 15,40,85 years, mixed 806.7

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