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BRAIN MEDULLA OBLONGATA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Medulla oblongata
MEDULLA OBLONGATA - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
HPA Brain:448.6 nTPM
FANTOM5:0.0 Scaled Tags Per Million

MEDULLA OBLONGATA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

448.6
Sample id Sample description nTPM
Area postrema
nTPM: 405.6
2306 Male, age 80, both hemispheres 516.2
2799 Male, age 61, both hemispheres 353.3
2054 Male, age 76, both hemispheres 347.2
Dorsal medullary reticular nucleus
nTPM: 283.5
2088 Male, age 76, both hemispheres 356.8
2373 Male, age 61, both hemispheres 257.9
2040 Female, age 85, both hemispheres 235.7
Dorsal motor vagal complex
nTPM: 353.6
2643 Male, age 74, both hemispheres 735.0
2000 Male, age 74, unknown 381.3
2844 Male, age 55, unknown 377.6
2807 Female, age 85, both hemispheres 325.3
2797 Male, age 61, both hemispheres 290.6
2133 Female, age 91, both hemispheres 286.6
2185 Male, age 76, both hemispheres 284.7
2813 Female, age 72, unknown 148.1
Gigantocellular reticular nuclei, medullary
nTPM: 327.1
2310 Male, age 80, both hemispheres 605.2
1876 Female, age 85, both hemispheres 343.9
2462 Male, age 74, both hemispheres 323.8
2387 Female, age 91, both hemispheres 245.8
2022 Male, age 76, right hemisphere 236.5
2314 Male, age 61, both hemispheres 207.6
Gigantocellular reticular nuclei, pars
nTPM: 284.9
2084 Female, age 85, both hemispheres 479.7
2330 Male, age 80, both hemispheres 303.3
2706 Male, age 80, both hemispheres 278.3
2168 Male, age 76, both hemispheres 210.1
2336 Male, age 61, both hemispheres 153.0
Inferior olive
nTPM: 224.2
2628 Female, age 91, both hemispheres 376.6
2379 Male, age 80, both hemispheres 230.1
2563 Male, age 74, both hemispheres 177.3
2178 Male, age 61, both hemispheres 175.9
2085 Female, age 85, both hemispheres 161.4
Lateral medullary reticular nucleus
nTPM: 226.9
2804 Female, age 91, both hemispheres 399.3
2190 Female, age 85, both hemispheres 259.8
2374 Male, age 61, both hemispheres 216.6
2852 Male, age 80, both hemispheres 205.5
2044 Male, age 76, both hemispheres 156.3
2305 Male, age 74, both hemispheres 123.7
Medial olivary nucleus
nTPM: 227.9
2851 Male, age 80, both hemispheres 370.8
1962 Male, age 76, both hemispheres 294.7
2138 Female, age 91, both hemispheres 168.7
1943 Male, age 61, both hemispheres 77.6
Medial vestibular nucleus
nTPM: 293.3
2624 Male, age 61, both hemispheres 370.8
2743 Female, age 85, both hemispheres 346.2
2801 Male, age 74, both hemispheres 308.0
2093 Male, age 80, both hemispheres 281.7
2134 Male, age 76, both hemispheres 234.5
2803 Female, age 91, both hemispheres 218.9
Motor hypoglossal nucleus
nTPM: 301.2
2182 Male, age 80, both hemispheres 407.1
2461 Male, age 61, both hemispheres 340.7
2132 Female, age 85, both hemispheres 328.6
2277 Male, age 76, both hemispheres 229.4
2125 Female, age 91, both hemispheres 200.3
Nucleus ambiguus
nTPM: 419.1
2071 Male, age 76, both hemispheres 773.3
2096 Female, age 85, both hemispheres 65.0
Nucleus cuneatus
nTPM: 334.1
2805 Female, age 91, both hemispheres 720.6
2131 Male, age 76, both hemispheres 432.0
2808 Female, age 85, both hemispheres 391.2
2564 Male, age 74, both hemispheres 324.9
2562 Male, age 61, both hemispheres 297.0
2100 Male, age 76, both hemispheres 281.9
2381 Male, age 80, both hemispheres 222.0
2376 Male, age 61, both hemispheres 199.8
2380 Male, age 80, both hemispheres 137.1
Nucleus gracilis
nTPM: 242.9
2382 Male, age 80, both hemispheres 299.6
2299 Female, age 85, both hemispheres 243.4
2627 Male, age 74, both hemispheres 185.6
Nucleus raphe obscurus
nTPM: 371.3
2142 Male, age 76, midline 598.4
2845 Female, age 85, midline 270.2
2800 Male, age 61, midline 245.4
Nucleus raphe pallidus
nTPM: 368.9
2183 Male, age 80, midline 548.5
2145 Male, age 76, midline 460.3
1924 Male, age 61, midline 98.0
Nucleus tractus solitarii
nTPM: 208.9
2191 Female, age 85, both hemispheres 363.4
2307 Male, age 80, both hemispheres 238.7
2656 Male, age 76, both hemispheres 147.3
2144 Female, age 91, right hemisphere 86.0
Parvicellular reticular nuclei
nTPM: 393.0
2119 Male, age 80, both hemispheres 478.1
2095 Male, age 76, both hemispheres 436.2
2558 Male, age 74, both hemispheres 264.8
Parvicellular reticular nuclei, medullary
nTPM: 277.9
2181 Male, age 80, left hemisphere 473.9
2189 Female, age 91, both hemispheres 233.1
2091 Female, age 85, both hemispheres 126.6
Peritrigeminal nucleus
nTPM: 136.6
2136 Male, age 76, both hemispheres 178.5
2067 Female, age 85, both hemispheres 122.0
2179 Male, age 61, both hemispheres 109.2
Prepositus hypoglossal nucleus
nTPM: 448.6
2855 Female, age 85, right hemisphere 542.3
2086 Male, age 80, both hemispheres 354.9
Spinal trigeminal nucleus, caudal
nTPM: 265.8
2390 Female, age 91, both hemispheres 379.5
2447 Male, age 76, both hemispheres 322.0
2308 Male, age 80, both hemispheres 257.9
2312 Male, age 61, both hemispheres 200.3
2642 Male, age 74, both hemispheres 169.3
Spinal trigeminal nucleus, interpolar
nTPM: 250.0
2389 Female, age 91, both hemispheres 363.1
2033 Male, age 80, both hemispheres 316.0
2386 Female, age 85, both hemispheres 231.9
2625 Male, age 61, both hemispheres 190.4
2066 Male, age 76, right hemisphere 148.7
Spinal vestibular nucleus
nTPM: 345.5
2806 Female, age 85, both hemispheres 517.9
2186 Female, age 91, both hemispheres 410.9
2384 Male, age 74, both hemispheres 370.8
2780 Male, age 80, both hemispheres 359.4
2796 Male, age 61, both hemispheres 225.2
2748 Male, age 76, both hemispheres 189.0
Superior vestibular nucleus
nTPM: 228.0
2383 Male, age 74, both hemispheres 282.2
2015 Male, age 80, both hemispheres 275.2
2061 Male, age 76, both hemispheres 126.7
Ventral medullary reticular nucleus
nTPM: 300.9
2060 Male, age 76, both hemispheres 350.7
2372 Male, age 61, both hemispheres 251.0
Ventrolateral medulla, A1-C1 cell groups
nTPM: 250.8
2302 Female, age 91, both hemispheres 426.2
2118 Male, age 80, both hemispheres 283.1
2180 Male, age 61, both hemispheres 240.5
2741 Female, age 85, both hemispheres 184.5
1986 Male, age 76, both hemispheres 119.7

MEDULLA OBLONGATA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

0
FANTOM5 sample id Sample description Scaled Tags Per Million
Medulla oblongata
Scaled Tags Per Million: 0.0
FF:10174-103C3 60 years, female 0.0
FF:10155-103A2 76 years, female 0.0
FF:10038-101F2 18-64 years, mixed 0.0

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