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TISSUE PRIMARY DATA BASAL GANGLIA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: High
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:559.8 nTPM
HPA Brain:913.0 nTPM
GTEx:559.8 nTPM
FANTOM5:1705.7 Scaled Tags Per Million
Pig:629.9 nTPM
Mouse:219.1 nTPM
Allen mouse:12.8 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA040520
Glial cells High
Neuronal cells Medium


BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

913.0
Sample id Sample description nTPM
Caudate nucleus
nTPM: 455.0
2288 Male, age 75, left hemisphere 877.9
2846 Female, age 79, unknown 501.2
2481 Female, age 94, left hemisphere 500.9
1854 Male, age 80, left hemisphere 394.6
2290 Female, age 72, unknown 383.3
1781 Male, age 74, unknown 350.6
1857 Female, age 85, left hemisphere 326.9
2289 Male, age 61, right hemisphere 304.7
Globus pallidus, externus
nTPM: 722.7
1996 Male, age 80, right hemisphere 1034.2
2772 Female, age 79, unknown 846.8
2395 Male, age 75, both hemispheres 698.4
2646 Male, age 61, right hemisphere 575.0
2567 Female, age 72, unknown 459.2
Globus pallidus, internus
nTPM: 913.0
2287 Male, age 75, right hemisphere 1152.0
2111 Female, age 85, right hemisphere 1135.2
1818 Male, age 74, unknown 1065.4
2778 Female, age 91, both hemispheres 968.0
2037 Male, age 80, right hemisphere 909.9
2566 Female, age 72, unknown 747.2
2483 Female, age 94, right hemisphere 413.1
Nucleus accumbens
nTPM: 499.6
2391 Female, age 94, left hemisphere 810.1
2286 Male, age 75, left hemisphere 720.4
2698 Female, age 72, unknown 719.5
2732 Male, age 80, right hemisphere 471.2
1783 Male, age 74, unknown 359.9
2824 Male, age 61, right hemisphere 339.5
1806 Female, age 85, left hemisphere 327.1
1856 Female, age 91, right hemisphere 248.8
Nucleus basalis of Meynert
nTPM: 698.5
2821 Male, age 75, both hemispheres 1370.5
2393 Male, age 80, right hemisphere 502.0
2569 Male, age 61, both hemispheres 473.9
2484 Female, age 94, left hemisphere 447.5
Nucleus of the diagonal band
nTPM: 235.4
1812 Female, age 91, both hemispheres 355.5
2029 Male, age 61, right hemisphere 246.3
2775 Male, age 80, right hemisphere 196.4
2195 Female, age 85, both hemispheres 189.8
1979 Male, age 74, unknown 189.1
Putamen
nTPM: 454.6
2482 Female, age 94, left hemisphere 773.5
1829 Male, age 74, unknown 555.8
2489 Female, age 72, unknown 487.6
2647 Male, age 75, left hemisphere 371.1
1937 Female, age 91, right hemisphere 366.3
2466 Female, age 79, unknown 327.0
1838 Male, age 80, right hemisphere 300.8
Septal nuclei
nTPM: 319.5
2394 Male, age 61, left hemisphere 563.1
2199 Male, age 80, right hemisphere 440.7
2629 Female, age 94, right hemisphere 373.1
2031 Female, age 72, unknown 257.4
2059 Female, age 85, both hemispheres 250.5
2009 Female, age 91, both hemispheres 211.1
1960 Male, age 74, unknown 140.7
Stria terminalis, bed nucleus
nTPM: 227.1
2201 Male, age 74, unknown 247.5
1974 Female, age 91, both hemispheres 233.2
2486 Female, age 94, both hemispheres 200.7

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

559.8
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 402.7
Samples: 246

Max nTPM: 1158.3
Min nTPM: 134.9
Std nTPM: 174.5
Median nTPM: 357.2
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 1158.3
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 1001.8
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 987.8
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 966.7
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 847.0
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 841.4
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 833.0
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 819.1
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 798.0
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 786.0
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 766.2
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 739.9
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 723.0
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 722.2
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 705.4
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 705.0
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 695.2
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 692.2
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 680.7
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 678.3
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 671.2
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 631.5
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 619.4
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 614.7
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 613.9
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 613.5
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 612.6
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 612.1
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 606.8
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 604.7
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 603.3
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 600.2
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 597.9
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 592.8
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 587.8
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 587.1
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 585.5
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 581.9
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 578.2
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 572.3
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 565.3
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 555.8
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 554.2
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 552.8
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 550.4
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 547.8
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 546.7
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 545.8
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 536.8
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 535.2
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 535.0
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 528.7
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 521.5
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 515.3
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 512.4
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 511.3
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 507.4
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 504.4
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 501.4
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 498.6
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 497.1
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 497.1
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 494.3
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 491.7
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 491.0
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 490.9
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 490.0
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 489.2
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 486.8
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 485.9
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 482.4
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 476.5
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 473.0
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 471.6
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 471.0
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 460.9
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 459.3
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 458.2
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 455.1
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 454.6
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 454.2
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 453.9
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 453.9
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 452.4
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 441.1
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 439.8
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 436.3
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 435.0
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 432.2
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 427.5
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 425.1
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 422.7
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 422.2
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 417.3
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 414.4
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 414.2
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 412.8
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 411.6
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 410.3
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 406.9
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 405.0
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 403.2
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 401.9
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 398.9
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 398.9
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 398.7
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 391.0
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 389.7
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 387.4
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 385.4
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 380.6
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 380.1
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 379.3
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 378.9
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 376.9
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 376.4
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 375.5
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 372.7
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 371.1
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 369.1
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 367.1
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 361.6
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 358.7
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 355.8
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 352.3
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 351.2
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 350.8
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 349.5
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 347.4
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 346.0
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 346.0
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 344.3
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 343.8
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 339.0
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 337.6
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 336.9
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 336.7
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 335.6
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 335.4
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 334.8
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 334.1
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 334.1
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 332.8
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 332.6
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 329.8
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 329.0
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 328.5
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 328.5
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 328.4
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 325.9
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 325.5
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 324.9
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 324.5
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 324.4
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 322.4
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 321.6
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 321.4
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 320.2
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 318.9
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 317.4
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 316.1
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 315.7
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 310.5
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 310.5
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 307.4
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 306.2
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 305.6
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 304.9
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 304.2
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 304.2
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 302.5
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 302.4
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 300.9
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 297.4
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 293.7
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 293.6
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 290.7
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 289.7
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 289.2
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 288.5
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 285.0
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 284.7
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 281.6
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 279.2
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 278.5
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 276.8
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 274.4
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 272.3
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 271.9
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 271.4
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 271.1
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 268.0
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 263.7
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 262.0
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 258.5
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 256.7
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 256.2
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 255.9
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 253.6
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 253.4
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 251.5
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 249.7
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 247.9
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 246.1
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 245.0
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 242.6
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 242.4
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 239.5
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 235.1
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 234.4
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 232.6
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 230.9
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 229.7
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 227.0
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 227.0
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 224.2
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 222.7
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 220.2
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 219.1
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 218.4
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 217.7
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 217.0
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 214.2
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 212.5
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 211.5
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 210.9
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 209.9
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 205.7
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 204.8
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 201.5
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 196.8
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 190.8
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 189.9
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 188.1
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 186.1
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 182.3
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 178.8
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 170.2
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 168.7
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 157.8
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 153.2
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 147.5
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 139.4
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 138.4
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 136.5
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 134.9
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 285.5
Samples: 246

Max nTPM: 1255.9
Min nTPM: 92.2
Std nTPM: 163.8
Median nTPM: 238.7
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 1255.9
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 1054.3
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 1046.3
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 932.4
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 763.2
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 740.2
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 704.9
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 672.3
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 656.1
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 631.8
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 628.8
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 612.0
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 607.6
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 575.2
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 570.1
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 569.9
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 554.3
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 548.6
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 528.2
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 497.5
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 491.7
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 489.6
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 463.3
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 457.6
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 455.4
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 452.5
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 447.0
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 444.0
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 441.1
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 432.8
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 425.2
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 422.4
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 420.1
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 408.9
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 406.9
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 400.0
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 397.4
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 393.9
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 393.3
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 391.8
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 391.8
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 388.4
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 385.4
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 385.0
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 384.2
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 384.0
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 382.8
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 379.0
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 376.2
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 375.8
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 375.1
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 373.6
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 367.7
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 353.3
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 349.3
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 348.5
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 342.2
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 341.2
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 341.0
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 340.7
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 338.3
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 335.2
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 332.2
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 331.7
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 331.5
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 330.3
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 326.9
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 324.9
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 323.6
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 323.5
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 318.9
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 318.5
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 317.1
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 317.0
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 316.7
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 316.4
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 315.6
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 315.3
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 308.8
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 308.2
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 307.0
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 302.4
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 300.8
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 299.0
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 296.9
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 294.5
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 294.2
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 292.3
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 291.2
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 290.2
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 288.9
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 283.4
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 283.1
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 281.0
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 280.8
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 280.7
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 279.1
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 278.7
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 278.6
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 277.5
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 276.5
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 274.5
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 271.2
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 267.8
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 265.7
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 265.6
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 263.8
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 261.9
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 261.8
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 260.5
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 260.4
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 257.4
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 257.0
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 253.7
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 253.4
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 248.7
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 247.6
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 245.9
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 243.0
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 240.6
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 240.4
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 239.8
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 239.5
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 237.9
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 237.4
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 237.3
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 236.4
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 236.4
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 235.1
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 234.2
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 231.2
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 231.2
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 230.9
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 230.7
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 228.4
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 228.2
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 228.2
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 227.6
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 226.3
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 224.0
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 223.9
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 222.9
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 222.2
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 220.8
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 219.5
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 219.1
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 217.8
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 217.4
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 215.4
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 214.4
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 214.0
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 213.7
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 213.7
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 213.2
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 212.0
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 210.1
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 209.7
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 209.2
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 207.6
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 206.7
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 206.3
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 205.7
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 203.0
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 202.3
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 201.8
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 201.5
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 199.3
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 197.7
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 197.5
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 196.1
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 194.1
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 192.7
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 191.8
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 191.0
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 190.9
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 188.1
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 187.4
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 186.3
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 185.7
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 184.7
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 184.4
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 183.8
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 183.7
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 183.7
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 183.5
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 181.0
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 180.8
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 180.4
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 180.1
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 177.7
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 177.4
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 176.9
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 176.1
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 176.0
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 174.7
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 173.2
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 171.4
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 170.4
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 170.2
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 168.1
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 166.3
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 164.6
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 161.8
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 161.4
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 160.4
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 159.4
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 159.0
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 157.4
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 156.8
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 155.2
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 154.7
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 152.4
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 151.0
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 149.5
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 149.4
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 147.9
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 147.0
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 146.8
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 145.5
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 143.2
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 142.1
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 141.2
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 139.6
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 138.4
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 137.7
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 137.1
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 135.7
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 135.5
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 133.6
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 130.3
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 123.7
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 123.0
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 121.8
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 120.1
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 119.0
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 118.2
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 117.4
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 115.2
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 113.1
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 111.0
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 109.5
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 108.0
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 104.5
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 101.8
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 98.9
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 92.2
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Brain - Putamen (basal ganglia)
Average nTPM: 559.8
Samples: 205

Max nTPM: 1657.0
Min nTPM: 148.7
Std nTPM: 226.9
Median nTPM: 521.0
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 1657.0
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 1506.1
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 1455.8
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 1309.1
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 1202.8
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 1173.9
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 1130.1
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 1099.4
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 1062.2
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 1024.3
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 1010.6
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 962.7
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 959.7
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 937.6
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 915.1
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 906.9
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 846.7
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 843.2
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 832.9
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 826.6
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 805.4
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 797.4
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 772.5
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 772.4
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 770.1
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 758.6
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 746.8
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 744.2
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 739.1
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 737.8
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 731.1
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 718.4
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 711.0
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 709.2
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 700.1
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 689.5
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 686.6
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 676.4
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 674.9
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 673.9
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 673.2
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 672.5
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 671.9
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 670.0
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 669.8
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 667.1
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 666.2
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 660.9
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 658.8
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 658.4
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 658.2
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 655.1
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 653.8
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 646.0
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 644.9
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 639.3
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 634.5
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 632.2
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 631.6
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 630.5
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 622.7
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 621.7
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 616.5
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 610.4
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 609.4
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 609.0
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 592.5
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 591.4
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 589.2
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 588.9
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 586.3
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 584.7
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 584.3
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 582.6
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 572.2
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 571.9
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 568.1
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 566.2
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 565.1
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 564.5
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 564.3
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 562.8
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 558.3
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 554.4
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 553.4
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 552.0
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 550.6
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 548.7
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 547.8
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 546.8
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 546.8
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 545.0
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 541.9
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 534.8
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 528.1
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 527.6
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 526.2
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 525.0
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 523.9
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 521.9
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 521.8
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 521.4
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 521.0
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 520.1
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 515.3
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 507.8
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 507.1
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 506.1
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 505.4
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 501.9
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 501.1
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 499.6
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 497.8
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 497.5
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 495.8
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 495.0
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 491.5
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 489.5
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 489.1
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 486.8
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 485.3
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 483.7
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 483.3
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 482.8
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 481.7
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 480.8
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 476.6
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 474.8
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 473.8
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 472.0
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 470.6
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 464.3
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 463.3
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 462.3
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 460.2
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 458.0
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 456.8
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 455.3
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 454.9
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 454.4
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 453.6
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 453.1
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 442.4
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 441.4
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 437.9
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 436.6
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 434.8
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 434.5
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 429.9
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 428.3
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 427.0
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 419.5
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 414.5
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 414.1
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 411.2
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 409.5
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 402.9
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 396.1
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 395.4
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 394.3
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 391.9
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 391.6
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 391.2
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 390.2
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 390.1
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 389.2
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 385.9
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 384.8
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 383.3
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 377.4
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 371.6
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 369.4
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 365.6
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 365.3
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 363.6
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 362.4
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 361.4
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 360.7
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 360.3
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 356.4
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 345.1
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 343.5
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 337.8
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 334.9
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 333.8
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 330.7
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 330.3
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 327.6
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 324.3
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 318.0
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 314.9
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 313.7
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 300.3
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 292.7
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 290.4
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 285.7
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 284.7
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 280.0
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 278.9
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 278.9
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 271.2
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 219.4
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 200.5
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 183.2
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 148.7
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

1705.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 680.1
FF:10164-103B2 76 years, female 680.1
Nucleus accumbens
Scaled Tags Per Million: 1002.7
FF:10037-101F1 23-56 years, mixed 1002.7
Putamen
Scaled Tags Per Million: 674.8
FF:10176-103C5 60 years, female 674.8
Globus pallidus
Scaled Tags Per Million: 1705.7
FF:10175-103C4 60 years, female 1739.0
FF:10161-103A8 76 years, female 1672.4

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

629.9
Pig sample Sample description nTPM
Caudate
nTPM: 125.5
Samples: 4

Max nTPM: 151.3
Min nTPM: 106.0
Sample A Female 118.0
Sample B Female 106.0
Sample C Male 151.3
Sample D Male 126.7
Putamen
nTPM: 629.9
Samples: 4

Max nTPM: 926.5
Min nTPM: 271.1
Sample A Female 926.5
Sample B Female 271.1
Sample C Male 497.8
Sample D Male 824.2
Septum
nTPM: 295.7
Samples: 4

Max nTPM: 407.4
Min nTPM: 223.3
Sample A Female 223.3
Sample B Female 236.5
Sample C Male 315.4
Sample D Male 407.4
Ventral pallidum
nTPM: 505.2
Samples: 4

Max nTPM: 805.6
Min nTPM: 124.1
Sample A Female 124.1
Sample B Female 425.8
Sample C Male 805.6
Sample D Male 665.1

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

219.1
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 219.1
Samples: 4

Max nTPM: 249.0
Min nTPM: 184.1
Sample A Male 225.0
Sample B Male 218.3
Sample C Female 249.0
Sample D Female 184.1
Septum
nTPM: 187.3
Samples: 4

Max nTPM: 219.3
Min nTPM: 136.7
Sample A Male 136.7
Sample B Male 190.1
Sample C Female 219.3
Sample D Female 203.2
Ventral forebrain
nTPM: 176.0
Samples: 4

Max nTPM: 221.2
Min nTPM: 142.0
Sample A Male 169.3
Sample B Male 171.6
Sample C Female 221.2
Sample D Female 142.0

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

12.8
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 11.1
71380893 Antisense, RP_050421_01_F01, Mouse strain C57BL/6J (56 days, male) 11.1
Pallidum
Expression energy: 12.8
71380893 Antisense, RP_050421_01_F01, Mouse strain C57BL/6J (56 days, male) 12.8

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