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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
1412.5
nTPM
FANTOM5:
977.9
Scaled Tags Per Million
Pig:
795.7
nTPM
Allen mouse:
14.3
Expression energy
PONS - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
1412.5
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 951.7
2090
Male, age 80, both hemispheres
1048.2
1984
Male, age 76, both hemispheres
1003.6
2188
Female, age 91, both hemispheres
938.6
2301
Female, age 85, both hemispheres
816.6
Dorsal cochlear nucleus nTPM: 1005.2
2370
Male, age 61, both hemispheres
1192.7
2058
Male, age 76, both hemispheres
1060.9
2187
Female, age 91, both hemispheres
1001.2
2802
Male, age 74, right hemisphere
929.0
2378
Male, age 80, both hemispheres
842.3
Dorsal tegmental nucleus nTPM: 1147.8
2358
Male, age 61, both hemispheres
1285.9
2083
Male, age 80, both hemispheres
1243.6
2326
Male, age 74, both hemispheres
1067.0
1936
Male, age 76, left hemisphere
994.8
Dorsolateral tegmental area nTPM: 1412.5
2337
Male, age 61, both hemispheres
2277.3
2360
Male, age 74, both hemispheres
1407.0
2654
Male, age 80, both hemispheres
1179.4
2751
Female, age 85, both hemispheres
1147.2
2141
Male, age 76, both hemispheres
1051.6
Kolliker-Fuse nucleus nTPM: 1246.3
2315
Male, age 76, right hemisphere
1595.7
2163
Male, age 80, both hemispheres
1245.7
2793
Female, age 91, left hemisphere
897.5
Lateral lemniscal nuclei nTPM: 1142.3
2746
Female, age 85, left hemisphere
1468.9
2169
Male, age 76, both hemispheres
1288.0
2036
Male, age 80, both hemispheres
1256.1
2453
Male, age 74, right hemisphere
928.7
2320
Female, age 91, left hemisphere
769.6
Lateral parabrachial nucleus nTPM: 1333.2
2139
Female, age 85, right hemisphere
1621.6
2013
Male, age 80, both hemispheres
1383.0
2792
Male, age 76, both hemispheres
1201.7
2790
Male, age 61, both hemispheres
1126.6
Lateral vestibular nucleus nTPM: 1090.2
2311
Male, age 80, both hemispheres
1096.6
2184
Male, age 76, both hemispheres
1083.8
Locus coeruleus nTPM: 1289.8
2014
Male, age 55, unknown
1622.2
2123
Female, age 91, both hemispheres
1590.1
2317
Female, age 72, unknown
1435.5
2788
Male, age 74, unknown
1202.8
1980
Male, age 76, both hemispheres
1194.5
2162
Male, age 80, both hemispheres
1038.7
2720
Male, age 74, both hemispheres
945.0
Medial parabrachial nucleus nTPM: 1065.8
2170
Female, age 91, both hemispheres
1158.6
2854
Male, age 80, both hemispheres
1089.7
2463
Female, age 85, right hemisphere
1055.9
2156
Male, age 61, both hemispheres
1055.6
2786
Male, age 76, both hemispheres
969.3
Medial periolivary nuclei nTPM: 1221.2
2791
Male, age 74, right hemisphere
1488.0
2063
Male, age 76, both hemispheres
1440.1
2171
Female, age 85, both hemispheres
1349.3
2081
Male, age 80, both hemispheres
1151.2
2458
Female, age 91, both hemispheres
677.4
Motor facial nucleus nTPM: 1074.6
2062
Male, age 76, both hemispheres
1471.8
2365
Male, age 74, right hemisphere
1327.6
2126
Male, age 61, both hemispheres
1076.1
2697
Female, age 85, both hemispheres
942.7
2795
Female, age 91, both hemispheres
867.9
2327
Male, age 80, both hemispheres
761.6
Motor trigeminal nucleus nTPM: 1021.4
2335
Male, age 61, both hemispheres
1245.9
2079
Male, age 80, both hemispheres
1202.5
2309
Male, age 76, both hemispheres
982.3
2560
Male, age 74, both hemispheres
940.3
2321
Female, age 91, both hemispheres
736.2
Nuclei of the trapezoid body nTPM: 1153.3
1983
Male, age 76, both hemispheres
1472.7
2735
Female, age 85, both hemispheres
1356.9
2159
Male, age 61, both hemispheres
1293.3
2166
Male, age 80, both hemispheres
912.9
2368
Female, age 91, both hemispheres
730.6
Nucleus raphe magnus nTPM: 1219.7
2160
Male, age 61, both hemispheres
1510.9
2051
Male, age 76, both hemispheres
1505.1
2172
Female, age 85, both hemispheres
1336.0
2455
Male, age 74, both hemispheres
1264.7
2328
Male, age 80, both hemispheres
900.7
2459
Female, age 91, both hemispheres
800.9
Paramedian reticular nucleus nTPM: 1248.1
2050
Female, age 85, both hemispheres
1402.8
2057
Male, age 80, both hemispheres
1295.4
2313
Male, age 61, both hemispheres
1161.7
2052
Male, age 76, both hemispheres
1132.3
Pedunculopontine tegmental nucleus nTPM: 1225.7
2338
Male, age 61, both hemispheres
1450.2
1921
Female, age 85, both hemispheres
1130.9
2334
Male, age 80, both hemispheres
1096.0
Pontine nuclei nTPM: 1331.6
2787
Female, age 85, both hemispheres
1756.7
1863
Male, age 55, unknown
1595.6
2727
Male, age 61, right hemisphere
1496.7
2109
Female, age 72, unknown
1384.8
1968
Male, age 76, left hemisphere
1300.9
2115
Male, age 80, left hemisphere
1207.2
2454
Male, age 74, left hemisphere
960.0
2319
Female, age 91, both hemispheres
950.9
Pontine raphe nucleus nTPM: 1229.4
2122
Female, age 85, midline
1354.1
2853
Male, age 76, midline
1104.7
Posteroventral cochlear nucleus nTPM: 1118.9
2371
Male, age 61, both hemispheres
1312.6
2752
Female, age 85, both hemispheres
1153.6
2070
Male, age 76, both hemispheres
1146.1
2341
Male, age 80, both hemispheres
1007.2
2135
Female, age 91, both hemispheres
975.3
Principal sensory trigeminal nucleus nTPM: 1090.5
2158
Male, age 61, both hemispheres
1322.1
2008
Male, age 80, left hemisphere
1229.6
2324
Male, age 76, both hemispheres
993.3
2367
Female, age 91, left hemisphere
817.2
Reticular pontine nucleus, caudal nTPM: 974.7
2092
Male, age 76, both hemispheres
1345.1
2332
Male, age 80, right hemisphere
939.5
2559
Male, age 74, both hemispheres
871.1
2457
Female, age 91, both hemispheres
743.2
Reticular pontine nucleus, oral nTPM: 1113.7
2012
Female, age 85, both hemispheres
1456.9
1939
Male, age 80, both hemispheres
1318.2
2167
Male, age 76, both hemispheres
1036.0
2361
Male, age 74, both hemispheres
962.1
2366
Female, age 91, both hemispheres
795.1
Reticulotegmental nucleus nTPM: 992.2
2325
Male, age 76, both hemispheres
1159.7
2333
Male, age 80, both hemispheres
1040.2
2452
Male, age 74, both hemispheres
923.2
2322
Female, age 91, both hemispheres
845.9
Spinal trigeminal nucleus, oral nTPM: 1027.7
2737
Female, age 85, both hemispheres
1114.6
2164
Male, age 80, both hemispheres
984.8
1978
Male, age 76, both hemispheres
983.7
Subcoeruleus area nTPM: 1065.7
1958
Male, age 80, both hemispheres
1206.8
2369
Female, age 85, left hemisphere
1124.2
2323
Female, age 91, left hemisphere
1066.1
2089
Male, age 76, left hemisphere
1023.2
2451
Male, age 74, both hemispheres
908.3
Superior olive nTPM: 1160.5
2364
Male, age 74, right hemisphere
1546.0
1875
Female, age 85, both hemispheres
1422.6
2020
Male, age 76, both hemispheres
1244.7
2329
Male, age 80, right hemisphere
851.6
2561
Female, age 91, both hemispheres
737.7
Ventral periolivary nuclei nTPM: 1119.4
2023
Male, age 76, both hemispheres
1308.2
2130
Female, age 85, both hemispheres
1292.1
2165
Male, age 80, both hemispheres
1165.8
2794
Female, age 91, left hemisphere
711.4
Ventrolateral tegmental area, A5 NE cell group nTPM: 1111.9
2359
Male, age 61, both hemispheres
1351.6
1959
Male, age 76, both hemispheres
1236.7
2840
Female, age 85, both hemispheres
1217.8
2161
Male, age 80, both hemispheres
1073.5
2449
Male, age 74, both hemispheres
1060.8
2456
Female, age 91, both hemispheres
731.2
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
795.7
Pig sample
Sample description
nTPM
Pons nTPM: 795.7
Samples: 4
Max nTPM: 901.7
Min nTPM: 646.5
Sample A
Female
901.7
Sample B
Female
646.5
Sample C
Male
848.4
Sample D
Male
786.1
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.
The Human Protein Atlas project is funded
