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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
h
m
l
n
Cells in glomeruli:
High
Cells in tubules:
High
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
828.0
nTPM
HPA:
828.0
nTPM
GTEx:
464.5
nTPM
FANTOM5:
1132.4
Scaled Tags Per Million
KIDNEY - Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
Antibody HPA004426
Antibody CAB004647
Cells in glomeruli
High
High
Cells in tubules
High
Medium
KIDNEY - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Average nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
828.0
Female, age 58
Kidney sample 55 nTPM: 870
Cell types%
Cells in tubules:
60
Cells in glomeruli:
20
Fibroblasts:
5
Other cell types:
15
Female, age 67
Kidney sample 56 nTPM: 810.5
Cell types%
Cells in tubules:
70
Cells in glomeruli:
15
Fibroblasts:
10
Other cell types:
5
Female, age 55
Kidney sample 57 nTPM: 678.5
Cell types%
Cells in tubules:
80
Cells in glomeruli:
10
Fibroblasts:
5
Other cell types:
5
Male, age 46
Kidney sample 58 nTPM: 844.9
Cell types%
Cells in tubules:
60
Cells in glomeruli:
25
Fibroblasts:
5
Other cell types:
10
Female, age 57
Kidney sample 358 nTPM: 659.6
Cell types%
Cells in tubules:
60
Cells in glomeruli:
10
Fibroblasts:
10
Other cell types:
20
Male, age 78
Kidney sample 377 nTPM: 934
Cell types%
Cells in tubules:
65
Cells in glomeruli:
10
Fibroblasts:
5
Other cell types:
20
Male, age 73
Kidney sample 380 nTPM: 1086.5
Cell types%
Cells in tubules:
60
Cells in glomeruli:
10
Fibroblasts:
10
Other cell types:
20
Female, age 59
Kidney sample 394 nTPM: 875.4
Cell types%
Cells in tubules:
65
Cells in glomeruli:
10
Fibroblasts:
10
Other cell types:
15
Female, age 48
Kidney sample 414 nTPM: 692.8
Cell types%
Cells in tubules:
60
Cells in glomeruli:
5
Fibroblasts:
10
Other cell types:
25
KIDNEY - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
464.5
GTEx sample id
Sample description
nTPM
Kidney - Cortex Average nTPM: 464.5
Samples: 85
Max nTPM: 788.3
Min nTPM: 168.0
Std nTPM: 144.4
Median nTPM: 438.9
GTEX-13OVI-1126-SM-5KLZF
60-69 years, female
788.3
GTEX-1EKGG-2226-SM-7IGOA
60-69 years, male
781.2
GTEX-145MN-0326-SM-5QGQI
30-39 years, male
757.5
GTEX-QLQW-1626-SM-CMKFE
30-39 years, male
755.2
GTEX-1JMQK-1926-SM-CJI3B
60-69 years, male
729.5
GTEX-Y5V6-2026-SM-5IFHO
60-69 years, male
703.0
GTEX-11TTK-1926-SM-5PNW8
60-69 years, female
689.4
GTEX-1MUQO-2526-SM-E9TJN
60-69 years, male
666.5
GTEX-1PWST-2226-SM-EVR3G
70-79 years, male
650.4
GTEX-QDVN-1626-SM-48TZC
50-59 years, male
641.1
GTEX-ZLFU-0926-SM-5P9F8
40-49 years, male
632.4
GTEX-ZYFG-1626-SM-5GZYY
60-69 years, female
632.1
GTEX-147F4-2626-SM-5Q5CS
50-59 years, male
625.8
GTEX-17F96-1926-SM-7MGWY
70-79 years, male
620.2
GTEX-1IKK5-0926-SM-A9G2U
60-69 years, male
616.8
GTEX-1A3MW-2226-SM-73KUX
60-69 years, female
609.9
GTEX-T6MN-1826-SM-EXOHN
50-59 years, male
609.1
GTEX-1AX8Z-2326-SM-731CR
60-69 years, male
607.0
GTEX-1399S-0526-SM-5IJG8
30-39 years, female
591.9
GTEX-12WSG-0826-SM-5EQ5A
50-59 years, female
581.8
GTEX-P4QS-1126-SM-3NMD5
60-69 years, male
581.6
GTEX-1A8FM-2026-SM-7P8RN
50-59 years, female
572.4
GTEX-1N2DW-1826-SM-EAZ54
50-59 years, male
566.0
GTEX-1JMLX-1526-SM-AHZ3N
50-59 years, male
561.8
GTEX-ZVZP-0926-SM-5GIDB
50-59 years, male
547.4
GTEX-1HB9E-1826-SM-D4P33
50-59 years, male
539.6
GTEX-1JMPZ-1226-SM-ARU8Y
30-39 years, male
533.6
GTEX-XPVG-0526-SM-4B65N
50-59 years, male
532.9
GTEX-1R9PO-1626-SM-E6CPT
60-69 years, female
530.7
GTEX-1H3NZ-2126-SM-9WPQ6
60-69 years, male
529.9
GTEX-1GF9V-1926-SM-9JGHE
60-69 years, male
525.1
GTEX-1KWVE-0826-SM-CXZKO
30-39 years, male
517.9
GTEX-11GS4-2326-SM-5A5KS
60-69 years, male
500.9
GTEX-1H3VY-1926-SM-9JGHJ
50-59 years, male
485.4
GTEX-14C5O-2026-SM-5YYB1
60-69 years, male
482.8
GTEX-ZYT6-2226-SM-5GIC9
30-39 years, male
478.5
GTEX-1497J-0826-SM-5NQAJ
60-69 years, male
474.2
GTEX-13NYB-1726-SM-5N9G2
40-49 years, male
469.6
GTEX-15CHQ-2126-SM-6871M
60-69 years, male
460.5
GTEX-1LG7Y-2726-SM-D5OVW
50-59 years, male
458.9
GTEX-1GMR3-2426-SM-7MXV2
40-49 years, male
457.7
GTEX-13RTJ-2226-SM-5S2Q1
60-69 years, male
444.6
GTEX-13O1R-2526-SM-5N9FW
60-69 years, male
438.9
GTEX-1IL2V-1826-SM-ARU7R
70-79 years, male
437.4
GTEX-1NV8Z-2226-SM-EXOJ2
60-69 years, male
437.1
GTEX-1HBPI-2026-SM-CE6RZ
50-59 years, male
436.7
GTEX-ZC5H-1726-SM-5HL7X
40-49 years, female
429.1
GTEX-16MT8-1926-SM-7EPGL
60-69 years, female
426.4
GTEX-1GF9W-1326-SM-7P8PX
60-69 years, male
424.9
GTEX-1N2EF-1426-SM-EXUSH
60-69 years, male
422.7
GTEX-1BAJH-1826-SM-731DA
70-79 years, male
419.5
GTEX-1GN1U-2126-SM-AHZ4J
50-59 years, female
411.7
GTEX-11OF3-1326-SM-5N9FJ
60-69 years, male
410.3
GTEX-1C6VQ-2326-SM-7IGN1
50-59 years, male
406.6
GTEX-12696-0926-SM-5FQTV
60-69 years, male
404.0
GTEX-T5JC-1526-SM-4DM68
20-29 years, male
404.0
GTEX-1QP6S-1526-SM-EXUSG
40-49 years, male
399.3
GTEX-17F97-1926-SM-7IGM4
50-59 years, male
387.9
GTEX-1J1OQ-1426-SM-AHZ3P
40-49 years, female
382.8
GTEX-1E2YA-1626-SM-7MGXS
50-59 years, male
382.1
GTEX-Y5V5-1226-SM-EYYVP
60-69 years, female
370.8
GTEX-1HCU7-1826-SM-A9G2A
50-59 years, male
366.5
GTEX-15DYW-2026-SM-6AJBD
60-69 years, female
360.9
GTEX-1K9T9-1826-SM-CXZK2
50-59 years, female
356.0
GTEX-1I1GP-1926-SM-CNNQU
50-59 years, male
352.2
GTEX-1CB4J-1926-SM-7MGX8
60-69 years, male
347.2
GTEX-13OW6-1826-SM-5N9F9
50-59 years, male
346.6
GTEX-1JMQJ-1726-SM-E9U4V
50-59 years, male
327.9
GTEX-14C39-2126-SM-664OH
40-49 years, male
322.9
GTEX-13OVL-1826-SM-5KLZR
50-59 years, male
322.5
GTEX-1GTWX-1826-SM-9QEHG
60-69 years, male
322.0
GTEX-1F48J-2226-SM-7MXTN
50-59 years, female
319.2
GTEX-ZE9C-1426-SM-4WKGM
60-69 years, male
317.4
GTEX-REY6-1826-SM-EAZAT
60-69 years, male
311.6
GTEX-QDT8-1726-SM-EYYV6
30-39 years, female
309.9
GTEX-14E6D-2526-SM-5YYA9
50-59 years, male
284.6
GTEX-1JJ6O-2526-SM-AHZ3J
60-69 years, male
281.5
GTEX-O5YV-1226-SM-EV795
60-69 years, female
280.3
GTEX-1OJC4-2326-SM-DTXA5
50-59 years, female
257.6
GTEX-13112-2126-SM-5GCO4
50-59 years, male
252.2
GTEX-RN64-1626-SM-48FD7
50-59 years, male
246.3
GTEX-17HHY-2326-SM-7KFSR
50-59 years, male
235.9
GTEX-ZDXO-0226-SM-4WKH7
60-69 years, male
211.9
GTEX-S33H-1426-SM-EZ6L7
30-39 years, male
205.2
GTEX-NPJ8-2226-SM-3TW8D
40-49 years, male
168.0
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Kidney - Medulla Average nTPM: 341.9
Samples: 4
Max nTPM: 531.4
Min nTPM: 233.5
Std nTPM: 119.3
Median nTPM: 301.2
GTEX-TKQ2-0626-SM-EZ6LB
50-59 years, male
531.4
GTEX-T5JC-1626-SM-EZ6KW
20-29 years, male
355.9
GTEX-R55E-2026-SM-EZ6L1
20-29 years, male
246.6
GTEX-RU72-1926-SM-EAZ3F
50-59 years, female
233.5
KIDNEY - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
The Human Protein Atlas project is funded
