PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:347.3 nTPM
FANTOM5:11.4 Scaled Tags Per Million
Pig:2401.3 nTPM
Mouse:1190.3 nTPM
Allen mouse:8.2 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 347.3
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 280.8
2090 Male, age 80, both hemispheres 340.2
2188 Female, age 91, both hemispheres 310.5
1984 Male, age 76, both hemispheres 249.4
2301 Female, age 85, both hemispheres 223.0
Area postrema
nTPM: 305.8
2799 Male, age 61, both hemispheres 362.8
2306 Male, age 80, both hemispheres 352.6
2054 Male, age 76, both hemispheres 202.0
Dorsal cochlear nucleus
nTPM: 302.5
2802 Male, age 74, right hemisphere 353.9
2187 Female, age 91, both hemispheres 310.3
2378 Male, age 80, both hemispheres 293.7
2370 Male, age 61, both hemispheres 291.5
2058 Male, age 76, both hemispheres 263.0
Dorsal medullary reticular nucleus
nTPM: 287.0
2373 Male, age 61, both hemispheres 327.5
2040 Female, age 85, both hemispheres 274.2
2088 Male, age 76, both hemispheres 259.2
Dorsal motor vagal complex
nTPM: 298.7
2797 Male, age 61, both hemispheres 513.9
2643 Male, age 74, both hemispheres 323.9
2133 Female, age 91, both hemispheres 310.6
2807 Female, age 85, both hemispheres 304.8
2844 Male, age 55, unknown 275.7
2185 Male, age 76, both hemispheres 240.1
2000 Male, age 74, unknown 226.6
2813 Female, age 72, unknown 194.0
Dorsal tegmental nucleus
nTPM: 272.6
2083 Male, age 80, both hemispheres 344.3
2326 Male, age 74, both hemispheres 338.2
1936 Male, age 76, left hemisphere 224.3
2358 Male, age 61, both hemispheres 183.7
Dorsolateral tegmental area
nTPM: 296.4
2654 Male, age 80, both hemispheres 388.9
2751 Female, age 85, both hemispheres 315.7
2337 Male, age 61, both hemispheres 291.9
2360 Male, age 74, both hemispheres 262.8
2141 Male, age 76, both hemispheres 222.6
Gigantocellular reticular nuclei, medullary
nTPM: 270.0
2314 Male, age 61, both hemispheres 356.9
2387 Female, age 91, both hemispheres 277.6
1876 Female, age 85, both hemispheres 266.8
2022 Male, age 76, right hemisphere 253.2
2310 Male, age 80, both hemispheres 252.2
2462 Male, age 74, both hemispheres 213.5
Gigantocellular reticular nuclei, pars
nTPM: 235.0
2084 Female, age 85, both hemispheres 297.5
2336 Male, age 61, both hemispheres 226.7
2706 Male, age 80, both hemispheres 221.1
2330 Male, age 80, both hemispheres 220.0
2168 Male, age 76, both hemispheres 209.4
Inferior olive
nTPM: 315.2
2178 Male, age 61, both hemispheres 354.7
2085 Female, age 85, both hemispheres 348.7
2379 Male, age 80, both hemispheres 317.9
2563 Male, age 74, both hemispheres 310.1
2628 Female, age 91, both hemispheres 244.5
Kolliker-Fuse nucleus
nTPM: 270.6
2315 Male, age 76, right hemisphere 349.7
2163 Male, age 80, both hemispheres 234.3
2793 Female, age 91, left hemisphere 227.6
Lateral lemniscal nuclei
nTPM: 224.0
2320 Female, age 91, left hemisphere 245.4
2036 Male, age 80, both hemispheres 230.0
2453 Male, age 74, right hemisphere 218.8
2169 Male, age 76, both hemispheres 215.4
2746 Female, age 85, left hemisphere 210.7
Lateral medullary reticular nucleus
nTPM: 293.0
2804 Female, age 91, both hemispheres 340.3
2190 Female, age 85, both hemispheres 339.3
2852 Male, age 80, both hemispheres 334.9
2305 Male, age 74, both hemispheres 290.0
2374 Male, age 61, both hemispheres 236.9
2044 Male, age 76, both hemispheres 216.7
Lateral parabrachial nucleus
nTPM: 284.4
2792 Male, age 76, both hemispheres 336.3
2013 Male, age 80, both hemispheres 292.9
2139 Female, age 85, right hemisphere 268.6
2790 Male, age 61, both hemispheres 239.6
Lateral vestibular nucleus
nTPM: 260.7
2311 Male, age 80, both hemispheres 295.9
2184 Male, age 76, both hemispheres 225.6
Locus coeruleus
nTPM: 244.9
2123 Female, age 91, both hemispheres 277.4
2317 Female, age 72, unknown 271.4
2162 Male, age 80, both hemispheres 255.3
2014 Male, age 55, unknown 243.4
2720 Male, age 74, both hemispheres 230.0
2788 Male, age 74, unknown 229.0
1980 Male, age 76, both hemispheres 207.8
Medial olivary nucleus
nTPM: 347.3
1962 Male, age 76, both hemispheres 379.7
1943 Male, age 61, both hemispheres 378.5
2138 Female, age 91, both hemispheres 366.8
2851 Male, age 80, both hemispheres 264.3
Medial parabrachial nucleus
nTPM: 271.0
2170 Female, age 91, both hemispheres 327.6
2463 Female, age 85, right hemisphere 297.4
2156 Male, age 61, both hemispheres 253.9
2786 Male, age 76, both hemispheres 252.2
2854 Male, age 80, both hemispheres 223.8
Medial periolivary nuclei
nTPM: 245.6
2063 Male, age 76, both hemispheres 311.4
2081 Male, age 80, both hemispheres 268.1
2791 Male, age 74, right hemisphere 238.3
2458 Female, age 91, both hemispheres 221.6
2171 Female, age 85, both hemispheres 188.8
Medial vestibular nucleus
nTPM: 254.6
2803 Female, age 91, both hemispheres 316.4
2093 Male, age 80, both hemispheres 295.0
2743 Female, age 85, both hemispheres 249.9
2134 Male, age 76, both hemispheres 225.4
2624 Male, age 61, both hemispheres 224.5
2801 Male, age 74, both hemispheres 216.7
Motor facial nucleus
nTPM: 237.8
2126 Male, age 61, both hemispheres 296.9
2062 Male, age 76, both hemispheres 273.0
2795 Female, age 91, both hemispheres 257.4
2365 Male, age 74, right hemisphere 224.1
2697 Female, age 85, both hemispheres 189.8
2327 Male, age 80, both hemispheres 185.4
Motor hypoglossal nucleus
nTPM: 246.5
2132 Female, age 85, both hemispheres 346.2
2125 Female, age 91, both hemispheres 325.8
2182 Male, age 80, both hemispheres 224.5
2277 Male, age 76, both hemispheres 220.8
2461 Male, age 61, both hemispheres 115.1
Motor trigeminal nucleus
nTPM: 260.8
2309 Male, age 76, both hemispheres 277.5
2335 Male, age 61, both hemispheres 267.8
2321 Female, age 91, both hemispheres 261.6
2560 Male, age 74, both hemispheres 249.1
2079 Male, age 80, both hemispheres 247.9
Nuclei of the trapezoid body
nTPM: 247.2
1983 Male, age 76, both hemispheres 354.8
2166 Male, age 80, both hemispheres 232.6
2368 Female, age 91, both hemispheres 228.2
2159 Male, age 61, both hemispheres 228.1
2735 Female, age 85, both hemispheres 192.4
Nucleus ambiguus
nTPM: 298.4
2071 Male, age 76, both hemispheres 401.4
2096 Female, age 85, both hemispheres 195.5
Nucleus cuneatus
nTPM: 282.0
2808 Female, age 85, both hemispheres 329.6
2805 Female, age 91, both hemispheres 311.2
2380 Male, age 80, both hemispheres 304.5
2564 Male, age 74, both hemispheres 294.6
2381 Male, age 80, both hemispheres 292.4
2376 Male, age 61, both hemispheres 289.9
2562 Male, age 61, both hemispheres 271.0
2100 Male, age 76, both hemispheres 224.1
2131 Male, age 76, both hemispheres 220.7
Nucleus gracilis
nTPM: 313.9
2299 Female, age 85, both hemispheres 339.1
2382 Male, age 80, both hemispheres 322.6
2627 Male, age 74, both hemispheres 279.8
Nucleus raphe magnus
nTPM: 212.9
2455 Male, age 74, both hemispheres 255.0
2160 Male, age 61, both hemispheres 224.2
2459 Female, age 91, both hemispheres 222.4
2051 Male, age 76, both hemispheres 211.0
2328 Male, age 80, both hemispheres 208.1
2172 Female, age 85, both hemispheres 156.6
Nucleus raphe obscurus
nTPM: 337.2
2142 Male, age 76, midline 364.6
2800 Male, age 61, midline 329.7
2845 Female, age 85, midline 317.4
Nucleus raphe pallidus
nTPM: 333.0
1924 Male, age 61, midline 358.9
2145 Male, age 76, midline 349.9
2183 Male, age 80, midline 290.4
Nucleus tractus solitarii
nTPM: 251.0
2191 Female, age 85, both hemispheres 285.3
2144 Female, age 91, right hemisphere 280.4
2656 Male, age 76, both hemispheres 225.6
2307 Male, age 80, both hemispheres 212.6
Paramedian reticular nucleus
nTPM: 279.3
2057 Male, age 80, both hemispheres 314.4
2313 Male, age 61, both hemispheres 295.9
2052 Male, age 76, both hemispheres 290.1
2050 Female, age 85, both hemispheres 216.6
Parvicellular reticular nuclei
nTPM: 265.8
2119 Male, age 80, both hemispheres 309.7
2095 Male, age 76, both hemispheres 299.5
2558 Male, age 74, both hemispheres 188.1
Parvicellular reticular nuclei, medullary
nTPM: 279.1
2091 Female, age 85, both hemispheres 318.1
2189 Female, age 91, both hemispheres 265.8
2181 Male, age 80, left hemisphere 253.4
Pedunculopontine tegmental nucleus
nTPM: 261.9
2334 Male, age 80, both hemispheres 291.7
2338 Male, age 61, both hemispheres 269.5
1921 Female, age 85, both hemispheres 224.4
Peritrigeminal nucleus
nTPM: 325.7
2067 Female, age 85, both hemispheres 390.6
2136 Male, age 76, both hemispheres 329.1
2179 Male, age 61, both hemispheres 257.3
Pontine nuclei
nTPM: 258.7
2319 Female, age 91, both hemispheres 312.7
2454 Male, age 74, left hemisphere 270.0
1968 Male, age 76, left hemisphere 265.4
2109 Female, age 72, unknown 263.0
2115 Male, age 80, left hemisphere 262.6
1863 Male, age 55, unknown 248.9
2727 Male, age 61, right hemisphere 232.9
2787 Female, age 85, both hemispheres 214.3
Pontine raphe nucleus
nTPM: 248.0
2853 Male, age 76, midline 249.3
2122 Female, age 85, midline 246.6
Posteroventral cochlear nucleus
nTPM: 336.0
2341 Male, age 80, both hemispheres 397.1
2135 Female, age 91, both hemispheres 394.3
2371 Male, age 61, both hemispheres 316.3
2070 Male, age 76, both hemispheres 302.6
2752 Female, age 85, both hemispheres 269.8
Prepositus hypoglossal nucleus
nTPM: 290.4
2855 Female, age 85, right hemisphere 295.9
2086 Male, age 80, both hemispheres 284.9
Principal sensory trigeminal nucleus
nTPM: 224.9
2367 Female, age 91, left hemisphere 248.1
2324 Male, age 76, both hemispheres 231.0
2158 Male, age 61, both hemispheres 230.6
2008 Male, age 80, left hemisphere 189.9
Reticular pontine nucleus, caudal
nTPM: 270.6
2559 Male, age 74, both hemispheres 304.9
2092 Male, age 76, both hemispheres 297.9
2457 Female, age 91, both hemispheres 296.2
2332 Male, age 80, right hemisphere 183.3
Reticular pontine nucleus, oral
nTPM: 266.5
2361 Male, age 74, both hemispheres 293.1
2366 Female, age 91, both hemispheres 289.3
1939 Male, age 80, both hemispheres 272.7
2167 Male, age 76, both hemispheres 263.3
2012 Female, age 85, both hemispheres 214.1
Reticulotegmental nucleus
nTPM: 266.7
2452 Male, age 74, both hemispheres 305.4
2322 Female, age 91, both hemispheres 277.0
2333 Male, age 80, both hemispheres 242.6
2325 Male, age 76, both hemispheres 242.0
Spinal trigeminal nucleus, caudal
nTPM: 257.9
2308 Male, age 80, both hemispheres 276.0
2312 Male, age 61, both hemispheres 266.3
2390 Female, age 91, both hemispheres 255.1
2642 Male, age 74, both hemispheres 252.9
2447 Male, age 76, both hemispheres 239.4
Spinal trigeminal nucleus, interpolar
nTPM: 272.2
2389 Female, age 91, both hemispheres 301.7
2386 Female, age 85, both hemispheres 291.1
2033 Male, age 80, both hemispheres 282.9
2066 Male, age 76, right hemisphere 276.9
2625 Male, age 61, both hemispheres 208.4
Spinal trigeminal nucleus, oral
nTPM: 244.6
2164 Male, age 80, both hemispheres 258.6
1978 Male, age 76, both hemispheres 245.1
2737 Female, age 85, both hemispheres 230.3
Spinal vestibular nucleus
nTPM: 312.9
2384 Male, age 74, both hemispheres 405.2
2780 Male, age 80, both hemispheres 310.2
2806 Female, age 85, both hemispheres 305.3
2186 Female, age 91, both hemispheres 296.1
2748 Male, age 76, both hemispheres 294.3
2796 Male, age 61, both hemispheres 266.2
Subcoeruleus area
nTPM: 277.6
2451 Male, age 74, both hemispheres 368.0
2369 Female, age 85, left hemisphere 338.5
2323 Female, age 91, left hemisphere 234.3
2089 Male, age 76, left hemisphere 225.5
1958 Male, age 80, both hemispheres 221.8
Superior olive
nTPM: 231.9
2020 Male, age 76, both hemispheres 302.2
2364 Male, age 74, right hemisphere 232.4
2561 Female, age 91, both hemispheres 228.2
1875 Female, age 85, both hemispheres 199.0
2329 Male, age 80, right hemisphere 197.6
Superior vestibular nucleus
nTPM: 290.8
2383 Male, age 74, both hemispheres 309.6
2061 Male, age 76, both hemispheres 292.3
2015 Male, age 80, both hemispheres 270.4
Ventral medullary reticular nucleus
nTPM: 319.2
2372 Male, age 61, both hemispheres 350.1
2060 Male, age 76, both hemispheres 288.3
Ventral periolivary nuclei
nTPM: 223.6
2023 Male, age 76, both hemispheres 295.4
2165 Male, age 80, both hemispheres 224.2
2794 Female, age 91, left hemisphere 223.6
2130 Female, age 85, both hemispheres 151.2
Ventrolateral medulla, A1-C1 cell groups
nTPM: 326.0
2118 Male, age 80, both hemispheres 384.1
2302 Female, age 91, both hemispheres 327.2
2741 Female, age 85, both hemispheres 314.5
2180 Male, age 61, both hemispheres 306.0
1986 Male, age 76, both hemispheres 298.0
Ventrolateral tegmental area, A5 NE cell group
nTPM: 228.9
2456 Female, age 91, both hemispheres 248.9
2359 Male, age 61, both hemispheres 245.0
2161 Male, age 80, both hemispheres 243.8
2449 Male, age 74, both hemispheres 221.8
1959 Male, age 76, both hemispheres 221.1
2840 Female, age 85, both hemispheres 192.6

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 11.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 11.4
FF:10182-103D2 60 years, female 13.1
FF:10165-103B3 76 years, female 9.7
Medulla oblongata
Scaled Tags Per Million: 9.8
FF:10174-103C3 60 years, female 15.0
FF:10155-103A2 76 years, female 7.5
FF:10038-101F2 18-64 years, mixed 6.9
Pons
Scaled Tags Per Million: 8.6
FF:10033-101E6 18-54 years, mixed 8.6

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 2401.3
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 2343.4
Samples: 4

Max nTPM: 2753.8
Min nTPM: 1922.0
Sample A Female 2046.0
Sample B Female 1922.0
Sample C Male 2753.8
Sample D Male 2651.8
Pons
nTPM: 2401.3
Samples: 4

Max nTPM: 2906.6
Min nTPM: 1610.3
Sample A Female 2456.9
Sample B Female 1610.3
Sample C Male 2906.6
Sample D Male 2631.4

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 1190.3
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 1190.3
Samples: 4

Max nTPM: 1240.7
Min nTPM: 1086.8
Sample A Male 1240.7
Sample B Male 1086.8
Sample C Female 1224.1
Sample D Female 1209.5

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 8.2
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 8.2
100144177 Antisense, RP_110407_03_C10, Mouse strain C57BL/6J (56 days, male) 8.2
Pons
Expression energy: 7.6
100144177 Antisense, RP_110407_03_C10, Mouse strain C57BL/6J (56 days, male) 7.6

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