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RPL23A
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BRAIN SPINAL CORD Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
SPINAL CORD - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:1149.2 nTPM
HPA Brain:441.4 nTPM
GTEx:1149.2 nTPM
FANTOM5:15.7 Scaled Tags Per Million
Pig:2690.0 nTPM

SPINAL CORD - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

441.4
Sample id Sample description nTPM
Cervical spinal cord, central gray
nTPM: 292.7
1981 Female, age 72, midline 395.0
2048 Male, age 55, midline 300.8
2565 Male, age 75, midline 299.9
2816 Male, age 47, midline 242.9
2194 Female, age 79, both hemispheres 224.9
Cervical spinal cord, dorsal horn
nTPM: 324.7
2173 Female, age 72, unknown 457.4
2069 Male, age 47, both hemispheres 408.8
2296 Male, age 66, both hemispheres 375.3
1877 Male, age 55, unknown 300.1
2297 Male, age 75, both hemispheres 233.0
2721 Male, age 90, both hemispheres 173.4
Cervical spinal cord, ventral horn
nTPM: 441.4
2480 Male, age 75, both hemispheres 653.2
2809 Male, age 90, both hemispheres 547.4
2098 Female, age 72, unknown 514.2
2068 Male, age 55, unknown 392.5
2295 Male, age 66, both hemispheres 350.8
2820 Female, age 79, both hemispheres 190.5

SPINAL CORD - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1149.2
GTEx sample id Sample description nTPM
Brain - Spinal cord (cervical c-1)
Average nTPM: 1149.2
Samples: 159

Max nTPM: 2378.6
Min nTPM: 474.5
Std nTPM: 349.7
Median nTPM: 1094.6
GTEX-1HGF4-0011-R9a-SM-ADEH9 60-69 years, male 2378.6
GTEX-1GN2E-0011-R9b-SM-9WG7F 60-69 years, male 2115.4
GTEX-13O1R-0011-R9b-SM-5KM33 60-69 years, male 1950.1
GTEX-1IGQW-0011-R9b-SM-D4P25 60-69 years, male 1942.9
GTEX-1H1DF-0011-R9b-SM-CM2RN 40-49 years, female 1931.5
GTEX-1OJC4-0011-R9a-SM-EZ6N1 50-59 years, female 1911.7
GTEX-PWO3-0011-R9A-SM-EVR2V 60-69 years, female 1887.4
GTEX-1HSMO-0011-R9b-SM-CM2T2 60-69 years, male 1860.3
GTEX-1H1DG-0011-R9b-SM-ACKVB 70-79 years, male 1833.9
GTEX-1CB4H-0011-R9a-SM-CKZNL 60-69 years, female 1813.0
GTEX-13FTY-0011-R9b-SM-5KM2U 40-49 years, female 1793.5
GTEX-1HR98-0011-R9b-SM-ARL79 60-69 years, male 1768.1
GTEX-1CAV2-0011-R9b-SM-9WG5M 40-49 years, female 1740.5
GTEX-XLM4-0011-R9A-SM-4AT45 60-69 years, male 1708.8
GTEX-11WQK-0011-R9b-SM-5BC6N 50-59 years, male 1692.8
GTEX-11ZVC-0011-R9a-SM-57WC5 50-59 years, female 1646.4
GTEX-13CIG-0011-R9a-SM-5K7VU 50-59 years, male 1632.9
GTEX-1A8G7-0011-R9b-SM-7IGQH 60-69 years, male 1616.1
GTEX-QVUS-0011-R9A-SM-3GIJA 60-69 years, female 1602.8
GTEX-1EKGG-0011-R9a-SM-CMKFV 60-69 years, male 1581.8
GTEX-11EMC-0011-R9b-SM-DO921 60-69 years, female 1560.6
GTEX-13PL6-0011-R9b-SM-5O9CH 40-49 years, female 1551.0
GTEX-1I19N-0011-R9a-SM-CMKHN 70-79 years, male 1530.9
GTEX-1GF9W-0011-R9b-SM-9WG7J 60-69 years, male 1527.2
GTEX-14E7W-0011-R9a-SM-62LE6 70-79 years, male 1521.2
GTEX-ZF28-0011-R9a-SM-4WWDY 60-69 years, male 1513.7
GTEX-1C6VQ-0011-R9a-SM-7SB85 50-59 years, male 1512.8
GTEX-1C6VS-0011-R9b-SM-9WG5W 60-69 years, male 1489.8
GTEX-1LVA9-0011-R9a-SM-EYYWF 50-59 years, male 1479.9
GTEX-131YS-0011-R9b-SM-5EQLY 60-69 years, female 1452.0
GTEX-1J8JJ-0011-R9a-SM-ACKVF 60-69 years, female 1420.1
GTEX-NL4W-0011-R9a-SM-2I3G1 50-59 years, male 1412.9
GTEX-ZE9C-0011-R9a-SM-4WWCY 60-69 years, male 1405.1
GTEX-1I1GS-0011-R9b-SM-CMKHF 60-69 years, male 1394.6
GTEX-1F52S-0011-R9a-SM-9WG62 60-69 years, female 1393.6
GTEX-1H3O1-0011-R9b-SM-CM2SQ 60-69 years, male 1387.4
GTEX-RU72-0011-R9A-SM-2TF67 50-59 years, female 1374.2
GTEX-11UD2-0011-R9b-SM-DO926 50-59 years, male 1370.8
GTEX-13NYB-0011-R9b-SM-5MR5P 40-49 years, male 1351.5
GTEX-148VJ-0011-R9b-SM-5SI77 70-79 years, male 1345.8
GTEX-1KANB-0011-R9b-SM-EZ6MO 50-59 years, male 1345.7
GTEX-T6MN-0011-R9A-SM-32QOZ 50-59 years, male 1324.7
GTEX-1I1GV-0011-R9b-SM-ARZLE 60-69 years, male 1314.5
GTEX-1H3NZ-0011-R9a-SM-ADEH7 60-69 years, male 1305.6
GTEX-Q2AG-0011-R9A-SM-2HMJ6 40-49 years, female 1304.0
GTEX-YJ89-0011-R9a-SM-4SOK7 60-69 years, male 1302.0
GTEX-1CAMQ-0011-R9a-SM-9WG5Z 40-49 years, male 1296.6
GTEX-139T4-0011-R9b-SM-5HL6S 50-59 years, female 1264.2
GTEX-1192X-0011-R9b-SM-DO934 50-59 years, male 1262.9
GTEX-1J8EW-0011-R9b-SM-D4P2F 60-69 years, female 1254.3
GTEX-16NPV-0011-R9b-SM-79ONF 50-59 years, female 1250.3
GTEX-1EH9U-0011-R9b-SM-9WG5T 60-69 years, male 1236.3
GTEX-1LSNL-0011-R9b-SM-EYYWK 50-59 years, male 1229.7
GTEX-131XW-0011-R9a-SM-5N9EO 50-59 years, female 1223.5
GTEX-15DCD-0011-R9b-SM-7KUED 70-79 years, female 1218.8
GTEX-OXRO-0011-R9A-SM-3NB1X 60-69 years, female 1217.9
GTEX-13CZV-0011-R9a-SM-5LZXT 60-69 years, male 1217.8
GTEX-XMD1-0011-R9A-SM-4AT49 60-69 years, male 1212.5
GTEX-11ZTS-0011-R9b-SM-DO93Q 60-69 years, female 1208.1
GTEX-1EU9M-0011-R9a-SM-9WG61 60-69 years, male 1206.4
GTEX-13NZA-0011-R9b-SM-5MR5I 60-69 years, male 1195.8
GTEX-1ICLZ-0011-R9a-SM-ARL7E 60-69 years, male 1189.2
GTEX-NPJ8-0011-R9a-SM-2YUN5 40-49 years, male 1183.1
GTEX-ZVZQ-0011-R9a-SM-51MRH 60-69 years, female 1181.8
GTEX-11DZ1-0011-R9a-SM-DO933 50-59 years, male 1177.5
GTEX-1A32A-0011-R9b-SM-7MGXD 50-59 years, female 1169.2
GTEX-1I1CD-0011-R9a-SM-CMKHB 60-69 years, female 1164.6
GTEX-1LB8K-0011-R9a-SM-EZ6MP 50-59 years, male 1164.6
GTEX-1F88F-0011-R9b-SM-9WG7L 60-69 years, female 1153.1
GTEX-1BAJH-0011-R9b-SM-7EPIQ 70-79 years, male 1139.1
GTEX-1JN1M-0011-R9a-SM-EZ6MR 60-69 years, female 1138.6
GTEX-14E6C-0011-R9a-SM-6EU33 40-49 years, male 1138.4
GTEX-1H2FU-0011-R9b-SM-CE6S4 60-69 years, female 1138.2
GTEX-1GZ2Q-0011-R9a-SM-9WG7A 40-49 years, male 1127.7
GTEX-13PLJ-0011-R9b-SM-5O9DV 60-69 years, female 1127.3
GTEX-1R46S-0011-R9a-SM-EZ6N7 60-69 years, female 1122.6
GTEX-1MJK2-0011-R9b-SM-EZ6MZ 50-59 years, male 1115.6
GTEX-1I1HK-0011-R9a-SM-CMKHK 60-69 years, male 1113.8
GTEX-11ZUS-0011-R9b-SM-5BC76 30-39 years, male 1102.4
GTEX-11ONC-0011-R9b-SM-5NQ8J 60-69 years, male 1094.6
GTEX-13N1W-0011-R9b-SM-5MR4R 70-79 years, male 1087.2
GTEX-12WSH-0011-R9b-SM-5LZUG 50-59 years, male 1082.8
GTEX-1JJ6O-0011-R9a-SM-EYYXP 60-69 years, male 1080.4
GTEX-1JMLX-0011-R9a-SM-EYYXM 50-59 years, male 1076.6
GTEX-1B8L1-0011-R9b-SM-9WG5U 60-69 years, male 1072.6
GTEX-13NYS-0011-R9b-SM-5MR44 60-69 years, male 1072.2
GTEX-1HBPH-0011-R9a-SM-CMKH3 40-49 years, female 1064.9
GTEX-1IY9M-0011-R9b-SM-D3L8J 60-69 years, male 1059.9
GTEX-1LVAO-0011-R9a-SM-EZ6MY 60-69 years, male 1054.5
GTEX-1EWIQ-0011-R9a-SM-ARL8L 70-79 years, female 1052.1
GTEX-1HBPM-0011-R9b-SM-ARL7C 60-69 years, female 1049.8
GTEX-TSE9-0011-R9A-SM-3DB7Q 60-69 years, female 1047.9
GTEX-1GN1U-0011-R9b-SM-CMKFW 50-59 years, female 1028.0
GTEX-13OW5-0011-R9b-SM-5O9CL 60-69 years, male 1022.3
GTEX-13QJC-0011-R9b-SM-5PNX3 60-69 years, female 1018.9
GTEX-ZAB4-0011-R9a-SM-4SOKG 40-49 years, male 1012.6
GTEX-139UW-0011-R9b-SM-5LZYT 60-69 years, male 1000.3
GTEX-1GZ4I-0011-R9b-SM-B2LY8 50-59 years, male 995.5
GTEX-NPJ7-0011-R9a-SM-2TC5R 60-69 years, female 987.9
GTEX-QDT8-0011-R9A-SM-CYPRD 30-39 years, female 980.6
GTEX-13S7M-0011-R9a-SM-5O9DW 60-69 years, female 979.8
GTEX-1GF9V-0011-R9a-SM-CL53K 60-69 years, male 979.5
GTEX-14BIM-0011-R9a-SM-6LLJL 60-69 years, female 974.5
GTEX-1H23P-0011-R9a-SM-CM2T1 60-69 years, male 971.4
GTEX-145LU-0011-R9b-SM-5SI66 50-59 years, male 962.2
GTEX-1HFI6-0011-R9b-SM-CMKH4 40-49 years, male 958.5
GTEX-16Z82-0011-R9a-SM-7DUFA 60-69 years, male 957.8
GTEX-1RQEC-0011-R9a-SM-EZ6N3 60-69 years, male 956.5
GTEX-13PVQ-0011-R9b-SM-5LU3B 50-59 years, male 941.3
GTEX-1GTWX-0011-R9a-SM-ADEH4 60-69 years, male 924.2
GTEX-1J1OQ-0011-R9b-SM-ARZMK 40-49 years, female 923.3
GTEX-11GSP-0011-R9b-SM-5NQ77 60-69 years, female 921.2
GTEX-14BIN-0011-R9a-SM-5SI76 50-59 years, female 913.8
GTEX-1IDJH-0011-R9a-SM-ADEIN 70-79 years, male 910.5
GTEX-13VXU-0011-R9b-SM-5SI73 50-59 years, male 894.5
GTEX-13OVJ-0011-R9b-SM-5L3GD 50-59 years, female 892.5
GTEX-12126-0011-R9b-SM-5BC6P 20-29 years, male 890.8
GTEX-1HBPI-0011-R9b-SM-ARL76 50-59 years, male 889.5
GTEX-147GR-0011-R9a-SM-5S2UY 60-69 years, male 888.5
GTEX-13SLW-0011-R9a-SM-5O9BT 70-79 years, male 886.9
GTEX-13OVL-0011-R9a-SM-5P9GX 50-59 years, male 886.1
GTEX-T5JC-0011-R9A-SM-32PLV 20-29 years, male 882.6
GTEX-13N2G-0011-R9b-SM-5MR4E 60-69 years, male 879.5
GTEX-WL46-0011-R9A-SM-3MJFP 50-59 years, male 870.1
GTEX-15G19-0011-R9b-SM-7KUEE 60-69 years, male 865.9
GTEX-13X6I-0011-R9b-SM-5PNZJ 60-69 years, male 864.5
GTEX-13JUV-0011-R9a-SM-5LZX3 40-49 years, female 863.9
GTEX-12WSC-0011-R9a-SM-5GU4U 50-59 years, male 858.3
GTEX-14BIL-0011-R9a-SM-5SI7A 50-59 years, male 848.7
GTEX-13RTJ-0011-R9a-SM-5Q5AY 60-69 years, male 848.4
GTEX-13FLV-0011-R9b-SM-5L3DA 50-59 years, male 837.3
GTEX-OHPN-0011-R9A-SM-5TDEJ 60-69 years, female 836.8
GTEX-1F6I4-0011-R9a-SM-CMKFU 60-69 years, male 824.1
GTEX-14PN4-0011-R9a-SM-6LLH9 50-59 years, male 819.8
GTEX-14ABY-0011-R9a-SM-5PNZK 50-59 years, male 817.4
GTEX-17EVQ-0011-R9b-SM-79OJY 70-79 years, male 817.2
GTEX-14PJO-0011-R9b-SM-62LE9 60-69 years, male 810.0
GTEX-18464-0011-R9a-SM-731BK 50-59 years, male 809.4
GTEX-12WSD-0011-R9a-SM-5GU6W 60-69 years, female 804.6
GTEX-15DDE-0011-R9b-SM-6M46U 50-59 years, female 799.1
GTEX-15ER7-0011-R9b-SM-6PALF 20-29 years, female 793.5
GTEX-15CHQ-0011-R9a-SM-6LLHX 60-69 years, male 785.7
GTEX-13SLX-0011-R9b-SM-5SI6X 50-59 years, female 776.4
GTEX-1GZHY-0011-R9a-SM-9WG5R 50-59 years, female 775.3
GTEX-15DYW-0011-R9b-SM-6PALB 60-69 years, female 765.1
GTEX-13FXS-0011-R9a-SM-5K7UI 50-59 years, male 750.7
GTEX-1B933-0011-R9a-SM-79OOR 50-59 years, female 747.5
GTEX-14JIY-0011-R9a-SM-6EU34 60-69 years, male 741.8
GTEX-QVJO-0011-R9A-SM-2S1QH 60-69 years, female 714.9
GTEX-14BMV-0011-R9b-SM-5ZZUA 50-59 years, male 699.3
GTEX-16XZZ-0011-R9b-SM-7DHKX 60-69 years, male 676.6
GTEX-15EO6-0011-R9a-SM-6PALG 50-59 years, male 669.1
GTEX-14PJM-0011-R9b-SM-6EU35 50-59 years, female 666.2
GTEX-YFC4-0011-R9a-SM-4SOK4 40-49 years, female 646.7
GTEX-1H1ZS-0011-R9a-SM-CM2SO 70-79 years, male 640.1
GTEX-R55E-0011-R9A-SM-2TC6C 20-29 years, male 559.4
GTEX-1GN73-0011-R9a-SM-CKZO5 60-69 years, male 513.5
GTEX-1IKJJ-0011-R9a-SM-ARZLI 60-69 years, male 488.1
GTEX-RNOR-0011-R9A-SM-2TF52 50-59 years, female 474.5
Show allShow less

SPINAL CORD - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

15.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Spinal cord
Scaled Tags Per Million: 15.7
FF:10181-103D1 60 years, female 23.4
FF:10159-103A6 76 years, female 7.9

SPINAL CORD - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

2690.0
Pig sample Sample description nTPM
Dorsal spinal cord
nTPM: 2690.1
Samples: 4

Max nTPM: 3439.9
Min nTPM: 2087.5
Sample A Female 2087.5
Sample B Female 3048.1
Sample C Male 3439.9
Sample D Male 2184.7
Ventral spinal cord
nTPM: 2532.2
Samples: 4

Max nTPM: 2918.8
Min nTPM: 2202.4
Sample A Female 2202.4
Sample B Female 2605.5
Sample C Male 2918.8
Sample D Male 2402.2

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