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  • MT-ND6
BRAIN MEDULLA OBLONGATA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
Brain proteome
Medulla oblongata
MEDULLA OBLONGATA - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
HPA Brain:44433.6 nTPM
Pig:5556.7 nTPM

MEDULLA OBLONGATA - Annotated protein expression
Pending normal tissue analysis

MEDULLA OBLONGATA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

44433.6
Sample id Sample description nTPM
Area postrema
nTPM: 38855.8
2306 Male, age 80, both hemispheres 58799.8
2799 Male, age 61, both hemispheres 39461.0
2054 Male, age 76, both hemispheres 18306.6
Dorsal medullary reticular nucleus
nTPM: 21429.2
2373 Male, age 61, both hemispheres 29680.0
2088 Male, age 76, both hemispheres 27175.5
2040 Female, age 85, both hemispheres 7432.0
Dorsal motor vagal complex
nTPM: 35094.4
2797 Male, age 61, both hemispheres 67087.5
2807 Female, age 85, both hemispheres 58911.6
2185 Male, age 76, both hemispheres 46934.9
2813 Female, age 72, unknown 29895.5
2643 Male, age 74, both hemispheres 28518.3
2844 Male, age 55, unknown 23445.8
2133 Female, age 91, both hemispheres 15509.8
2000 Male, age 74, unknown 10452.2
Gigantocellular reticular nuclei, medullary
nTPM: 26927.3
2310 Male, age 80, both hemispheres 49296.6
2387 Female, age 91, both hemispheres 40759.3
2314 Male, age 61, both hemispheres 34035.2
2462 Male, age 74, both hemispheres 19307.0
2022 Male, age 76, right hemisphere 11747.5
1876 Female, age 85, both hemispheres 6418.4
Gigantocellular reticular nuclei, pars
nTPM: 41187.1
2330 Male, age 80, both hemispheres 81629.6
2706 Male, age 80, both hemispheres 53803.8
2336 Male, age 61, both hemispheres 27898.6
2168 Male, age 76, both hemispheres 23580.7
2084 Female, age 85, both hemispheres 19022.9
Inferior olive
nTPM: 29981.6
2628 Female, age 91, both hemispheres 54970.6
2379 Male, age 80, both hemispheres 44502.1
2178 Male, age 61, both hemispheres 19804.6
2085 Female, age 85, both hemispheres 18722.2
2563 Male, age 74, both hemispheres 11908.7
Lateral medullary reticular nucleus
nTPM: 21315.1
2374 Male, age 61, both hemispheres 42775.2
2804 Female, age 91, both hemispheres 30785.1
2190 Female, age 85, both hemispheres 21990.3
2044 Male, age 76, both hemispheres 13641.0
2852 Male, age 80, both hemispheres 10981.0
2305 Male, age 74, both hemispheres 7718.2
Medial olivary nucleus
nTPM: 16069.1
2851 Male, age 80, both hemispheres 42395.2
1962 Male, age 76, both hemispheres 9191.6
2138 Female, age 91, both hemispheres 8751.1
1943 Male, age 61, both hemispheres 3938.7
Medial vestibular nucleus
nTPM: 24248.9
2624 Male, age 61, both hemispheres 41183.0
2134 Male, age 76, both hemispheres 29628.5
2803 Female, age 91, both hemispheres 25001.8
2801 Male, age 74, both hemispheres 21475.3
2093 Male, age 80, both hemispheres 16587.0
2743 Female, age 85, both hemispheres 11618.1
Motor hypoglossal nucleus
nTPM: 29695.5
2461 Male, age 61, both hemispheres 63770.7
2182 Male, age 80, both hemispheres 34984.3
2132 Female, age 85, both hemispheres 28938.2
2125 Female, age 91, both hemispheres 11634.5
2277 Male, age 76, both hemispheres 9150.0
Nucleus ambiguus
nTPM: 7268.1
2096 Female, age 85, both hemispheres 7892.9
2071 Male, age 76, both hemispheres 6643.2
Nucleus cuneatus
nTPM: 41124.1
2805 Female, age 91, both hemispheres 75161.0
2381 Male, age 80, both hemispheres 53582.0
2808 Female, age 85, both hemispheres 50361.6
2380 Male, age 80, both hemispheres 45132.5
2131 Male, age 76, both hemispheres 37265.6
2100 Male, age 76, both hemispheres 33196.9
2562 Male, age 61, both hemispheres 31482.5
2376 Male, age 61, both hemispheres 22024.7
2564 Male, age 74, both hemispheres 21909.9
Nucleus gracilis
nTPM: 44433.6
2299 Female, age 85, both hemispheres 64304.3
2382 Male, age 80, both hemispheres 50563.2
2627 Male, age 74, both hemispheres 18433.2
Nucleus raphe obscurus
nTPM: 11905.6
2845 Female, age 85, midline 15431.9
2800 Male, age 61, midline 13619.3
2142 Male, age 76, midline 6665.5
Nucleus raphe pallidus
nTPM: 9776.0
2183 Male, age 80, midline 17591.6
2145 Male, age 76, midline 7948.5
1924 Male, age 61, midline 3787.9
Nucleus tractus solitarii
nTPM: 27644.7
2307 Male, age 80, both hemispheres 47038.8
2191 Female, age 85, both hemispheres 39294.7
2656 Male, age 76, both hemispheres 18199.3
2144 Female, age 91, right hemisphere 6045.8
Parvicellular reticular nuclei
nTPM: 18354.6
2095 Male, age 76, both hemispheres 23407.1
2558 Male, age 74, both hemispheres 19924.6
2119 Male, age 80, both hemispheres 11732.1
Parvicellular reticular nuclei, medullary
nTPM: 22157.0
2181 Male, age 80, left hemisphere 30460.0
2189 Female, age 91, both hemispheres 18502.9
2091 Female, age 85, both hemispheres 17508.0
Peritrigeminal nucleus
nTPM: 15106.4
2136 Male, age 76, both hemispheres 21176.3
2179 Male, age 61, both hemispheres 14532.7
2067 Female, age 85, both hemispheres 9610.2
Prepositus hypoglossal nucleus
nTPM: 17556.8
2855 Female, age 85, right hemisphere 18381.3
2086 Male, age 80, both hemispheres 16732.3
Spinal trigeminal nucleus, caudal
nTPM: 32528.4
2308 Male, age 80, both hemispheres 44308.4
2390 Female, age 91, both hemispheres 42910.7
2447 Male, age 76, both hemispheres 31119.7
2312 Male, age 61, both hemispheres 22888.6
2642 Male, age 74, both hemispheres 21414.7
Spinal trigeminal nucleus, interpolar
nTPM: 23224.1
2389 Female, age 91, both hemispheres 39717.1
2625 Male, age 61, both hemispheres 36614.1
2066 Male, age 76, right hemisphere 16741.1
2386 Female, age 85, both hemispheres 13100.9
2033 Male, age 80, both hemispheres 9947.2
Spinal vestibular nucleus
nTPM: 21408.0
2796 Male, age 61, both hemispheres 35296.0
2806 Female, age 85, both hemispheres 26460.9
2748 Male, age 76, both hemispheres 19885.8
2186 Female, age 91, both hemispheres 18439.1
2384 Male, age 74, both hemispheres 14481.2
2780 Male, age 80, both hemispheres 13884.8
Superior vestibular nucleus
nTPM: 13141.3
2061 Male, age 76, both hemispheres 18943.1
2383 Male, age 74, both hemispheres 11005.8
2015 Male, age 80, both hemispheres 9475.1
Ventral medullary reticular nucleus
nTPM: 26222.2
2372 Male, age 61, both hemispheres 30795.9
2060 Male, age 76, both hemispheres 21648.5
Ventrolateral medulla, A1-C1 cell groups
nTPM: 19738.7
2302 Female, age 91, both hemispheres 32399.1
2180 Male, age 61, both hemispheres 21161.0
2118 Male, age 80, both hemispheres 17797.6
1986 Male, age 76, both hemispheres 15348.3
2741 Female, age 85, both hemispheres 11987.7

MEDULLA OBLONGATA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

5556.7
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 5556.7
Samples: 4

Max nTPM: 8367.7
Min nTPM: 3334.4
Sample A Female 8367.7
Sample B Female 5233.7
Sample C Male 5290.8
Sample D Male 3334.4

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