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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
45442.9
nTPM
Pig:
6888.0
nTPM
PONS - Annotated protein expression
Pending normal tissue analysis
PONS - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
45442.9
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 26726.1
2301
Female, age 85, both hemispheres
53645.0
2188
Female, age 91, both hemispheres
20892.3
1984
Male, age 76, both hemispheres
18463.1
2090
Male, age 80, both hemispheres
13904.0
Dorsal cochlear nucleus nTPM: 28361.1
2378
Male, age 80, both hemispheres
46358.7
2802
Male, age 74, right hemisphere
28661.1
2058
Male, age 76, both hemispheres
23660.2
2187
Female, age 91, both hemispheres
21685.0
2370
Male, age 61, both hemispheres
21440.6
Dorsal tegmental nucleus nTPM: 27256.0
2358
Male, age 61, both hemispheres
52853.6
2083
Male, age 80, both hemispheres
19791.2
1936
Male, age 76, left hemisphere
18941.8
2326
Male, age 74, both hemispheres
17437.6
Dorsolateral tegmental area nTPM: 15533.0
2141
Male, age 76, both hemispheres
28222.8
2337
Male, age 61, both hemispheres
18789.2
2654
Male, age 80, both hemispheres
12691.8
2751
Female, age 85, both hemispheres
9268.7
2360
Male, age 74, both hemispheres
8692.6
Kolliker-Fuse nucleus nTPM: 25678.9
2793
Female, age 91, left hemisphere
45038.1
2163
Male, age 80, both hemispheres
23413.2
2315
Male, age 76, right hemisphere
8585.3
Lateral lemniscal nuclei nTPM: 23458.9
2320
Female, age 91, left hemisphere
37691.5
2169
Male, age 76, both hemispheres
33671.0
2453
Male, age 74, right hemisphere
30558.9
2036
Male, age 80, both hemispheres
8382.3
2746
Female, age 85, left hemisphere
6991.1
Lateral parabrachial nucleus nTPM: 15058.7
2792
Male, age 76, both hemispheres
25246.7
2790
Male, age 61, both hemispheres
16575.2
2139
Female, age 85, right hemisphere
11147.9
2013
Male, age 80, both hemispheres
7264.9
Lateral vestibular nucleus nTPM: 42829.7
2184
Male, age 76, both hemispheres
48176.8
2311
Male, age 80, both hemispheres
37482.6
Locus coeruleus nTPM: 19450.5
2720
Male, age 74, both hemispheres
35656.2
2162
Male, age 80, both hemispheres
26511.8
2788
Male, age 74, unknown
20683.5
2317
Female, age 72, unknown
17846.1
1980
Male, age 76, both hemispheres
16181.7
2014
Male, age 55, unknown
11005.9
2123
Female, age 91, both hemispheres
8268.4
Medial parabrachial nucleus nTPM: 18699.6
2854
Male, age 80, both hemispheres
29433.3
2786
Male, age 76, both hemispheres
25208.9
2156
Male, age 61, both hemispheres
21338.3
2170
Female, age 91, both hemispheres
14457.1
2463
Female, age 85, right hemisphere
3060.5
Medial periolivary nuclei nTPM: 21244.5
2458
Female, age 91, both hemispheres
44762.5
2171
Female, age 85, both hemispheres
25906.2
2063
Male, age 76, both hemispheres
14956.0
2081
Male, age 80, both hemispheres
11938.9
2791
Male, age 74, right hemisphere
8658.9
Motor facial nucleus nTPM: 35901.0
2795
Female, age 91, both hemispheres
63069.8
2327
Male, age 80, both hemispheres
58166.9
2697
Female, age 85, both hemispheres
49682.4
2365
Male, age 74, right hemisphere
17343.9
2062
Male, age 76, both hemispheres
15638.3
2126
Male, age 61, both hemispheres
11504.6
Motor trigeminal nucleus nTPM: 26050.6
2321
Female, age 91, both hemispheres
43234.6
2309
Male, age 76, both hemispheres
29039.8
2335
Male, age 61, both hemispheres
23559.7
2560
Male, age 74, both hemispheres
17358.4
2079
Male, age 80, both hemispheres
17060.2
Nuclei of the trapezoid body nTPM: 21870.1
2368
Female, age 91, both hemispheres
40759.9
2166
Male, age 80, both hemispheres
25527.5
1983
Male, age 76, both hemispheres
15719.9
2159
Male, age 61, both hemispheres
14868.9
2735
Female, age 85, both hemispheres
12474.5
Nucleus raphe magnus nTPM: 28404.6
2328
Male, age 80, both hemispheres
43802.8
2459
Female, age 91, both hemispheres
41536.5
2172
Female, age 85, both hemispheres
35011.7
2455
Male, age 74, both hemispheres
22548.3
2051
Male, age 76, both hemispheres
13790.9
2160
Male, age 61, both hemispheres
13737.5
Paramedian reticular nucleus nTPM: 14494.0
2313
Male, age 61, both hemispheres
25289.9
2052
Male, age 76, both hemispheres
12140.6
2050
Female, age 85, both hemispheres
11634.4
2057
Male, age 80, both hemispheres
8911.0
Pedunculopontine tegmental nucleus nTPM: 22414.0
2334
Male, age 80, both hemispheres
29021.9
2338
Male, age 61, both hemispheres
28711.3
1921
Female, age 85, both hemispheres
9508.8
Pontine nuclei nTPM: 12990.9
2319
Female, age 91, both hemispheres
25739.3
2787
Female, age 85, both hemispheres
15972.8
2454
Male, age 74, left hemisphere
15613.4
2115
Male, age 80, left hemisphere
14171.0
1968
Male, age 76, left hemisphere
12686.1
1863
Male, age 55, unknown
8352.9
2109
Female, age 72, unknown
6838.7
2727
Male, age 61, right hemisphere
4553.4
Pontine raphe nucleus nTPM: 20563.8
2853
Male, age 76, midline
27437.4
2122
Female, age 85, midline
13690.2
Posteroventral cochlear nucleus nTPM: 16788.3
2341
Male, age 80, both hemispheres
24905.7
2371
Male, age 61, both hemispheres
24090.1
2752
Female, age 85, both hemispheres
13849.6
2070
Male, age 76, both hemispheres
11313.4
2135
Female, age 91, both hemispheres
9782.7
Principal sensory trigeminal nucleus nTPM: 34233.9
2324
Male, age 76, both hemispheres
70274.9
2367
Female, age 91, left hemisphere
43713.6
2158
Male, age 61, both hemispheres
14514.1
2008
Male, age 80, left hemisphere
8432.9
Reticular pontine nucleus, caudal nTPM: 33387.6
2332
Male, age 80, right hemisphere
58991.9
2457
Female, age 91, both hemispheres
47049.7
2092
Male, age 76, both hemispheres
16047.2
2559
Male, age 74, both hemispheres
11461.5
Reticular pontine nucleus, oral nTPM: 22928.5
2366
Female, age 91, both hemispheres
54310.9
2167
Male, age 76, both hemispheres
28969.2
2361
Male, age 74, both hemispheres
12052.3
1939
Male, age 80, both hemispheres
11886.8
2012
Female, age 85, both hemispheres
7423.5
Reticulotegmental nucleus nTPM: 45442.9
2322
Female, age 91, both hemispheres
55149.5
2333
Male, age 80, both hemispheres
50415.3
2325
Male, age 76, both hemispheres
45287.6
2452
Male, age 74, both hemispheres
30919.1
Spinal trigeminal nucleus, oral nTPM: 27657.1
2164
Male, age 80, both hemispheres
50639.2
1978
Male, age 76, both hemispheres
20717.7
2737
Female, age 85, both hemispheres
11614.6
Subcoeruleus area nTPM: 17875.1
2323
Female, age 91, left hemisphere
23658.3
2451
Male, age 74, both hemispheres
21333.0
2089
Male, age 76, left hemisphere
19388.2
1958
Male, age 80, both hemispheres
16311.8
2369
Female, age 85, left hemisphere
8684.2
Superior olive nTPM: 23639.7
2329
Male, age 80, right hemisphere
47939.8
2561
Female, age 91, both hemispheres
41758.7
2020
Male, age 76, both hemispheres
10891.0
2364
Male, age 74, right hemisphere
9921.3
1875
Female, age 85, both hemispheres
7687.9
Ventral periolivary nuclei nTPM: 22474.4
2794
Female, age 91, left hemisphere
35271.0
2165
Male, age 80, both hemispheres
30683.3
2130
Female, age 85, both hemispheres
17503.6
2023
Male, age 76, both hemispheres
6439.7
Ventrolateral tegmental area, A5 NE cell group nTPM: 30185.9
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
The Human Protein Atlas project is funded
