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BRAIN CEREBELLUM Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Cerebellum
CEREBELLUM - Expression summary
Protein expression
Cerebellumi

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Cells in granular layer: High
Cells in molecular layer: Medium
Purkinje cells: High
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:38582.1 nTPM
HPA Brain:35745.1 nTPM
GTEx:38582.1 nTPM
Pig:35977.4 nTPM
Mouse:23855.0 nTPM
Allen mouse:14.3 Expression energy

CEREBELLUM - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA051505Antibody HPA054758Antibody CAB016243
Purkinje cells HighHighHigh
Cells in granular layer HighHighHigh
Cells in molecular layer MediumMediumHigh







CEREBELLUM - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

35745.1
Sample id Sample description nTPM
Cerebellar cortex
nTPM: 27092.0
1769 Male, age 76, right hemisphere 60919.0
1774 Male, age 80, left hemisphere 37011.3
1768 Female, age 72, unknown 29864.0
2003 Female, age 85, right hemisphere 27433.5
2055 Female, age 91, right hemisphere 26083.6
2006 Male, age 61, right hemisphere 15016.1
1788 Male, age 55, unknown 11170.5
2101 Male, age 74, right hemisphere 9238.0
Cerebellar nuclei
nTPM: 35745.1
2882 Male, age 76, left hemisphere 86222.0
2177 Female, age 85, both hemispheres 60167.0
2005 Male, age 80, left hemisphere 36511.7
1871 Male, age 74, unknown 28510.9
2175 Male, age 61, right hemisphere 27120.3
1879 Male, age 55, unknown 23888.8
1966 Female, age 91, left hemisphere 23535.2
2783 Female, age 72, unknown 20871.0
2318 Male, age 74, left hemisphere 14879.3
Flocculonodular lobe
nTPM: 33903.5
1767 Male, age 76, left hemisphere 57343.0
1765 Male, age 55, unknown 48242.4
1771 Male, age 80, left hemisphere 48240.8
2176 Female, age 91, right hemisphere 32371.2
1792 Male, age 74, unknown 21030.8
1835 Female, age 85, right hemisphere 20360.2
2004 Male, age 61, right hemisphere 9735.8
Vermis
nTPM: 35145.7
1770 Male, age 76, left hemisphere 74566.4
1766 Male, age 55, unknown 63835.4
1778 Female, age 91, left hemisphere 53796.3
2834 Male, age 80, left hemisphere 31093.9
1825 Male, age 74, unknown 25003.1
1751 Male, age 74, right hemisphere 24662.0
1988 Female, age 85, left hemisphere 19319.7
2460 Male, age 61, both hemispheres 12646.0
1928 Female, age 72, unknown 11388.3

CEREBELLUM - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

38582.1
GTEx sample id Sample description nTPM
Brain - Cerebellar Hemisphere
Average nTPM: 38582.1
Samples: 215

Max nTPM: 228168.0
Min nTPM: 5855.3
Std nTPM: 35962.3
Median nTPM: 26650.9
GTEX-131XW-0011-R11a-SM-5DUV9 50-59 years, female 228168.0
GTEX-1CAV2-0011-R11a-SM-ARU8D 40-49 years, female 221386.2
GTEX-139UW-0011-R11a-SM-5IJGN 60-69 years, male 217079.0
GTEX-ZF28-0011-R11a-SM-4WWEI 60-69 years, male 182175.3
GTEX-1IOXB-0011-R11a-SM-A9G1X 50-59 years, male 180683.3
GTEX-16NPV-0011-R11a-SM-7IGMK 50-59 years, female 172228.3
GTEX-1LKK1-0011-R11a-SM-EXOIG 50-59 years, female 159879.6
GTEX-1J8Q2-0011-R11a-SM-A9SKI 60-69 years, male 145151.8
GTEX-13PLJ-0011-R11b-SM-5O9BS 60-69 years, female 115046.0
GTEX-13CZV-0011-R11b-SM-5N9FN 60-69 years, male 108454.3
GTEX-14C39-0011-R11b-SM-5YYAF 40-49 years, male 107037.4
GTEX-OHPN-0011-R11A-SM-2I5FM 60-69 years, female 97101.1
GTEX-1B8SG-0011-R11a-SM-7P8PF 50-59 years, male 96156.4
GTEX-16Z82-0011-R11a-SM-79OKJ 60-69 years, male 95842.1
GTEX-1HUB1-0011-R11b-SM-CE6SC 60-69 years, male 94988.0
GTEX-16XZZ-0011-R11a-SM-7EPI3 60-69 years, male 91174.9
GTEX-17EVQ-0011-R11a-SM-7LT9C 70-79 years, male 87391.4
GTEX-11EI6-0011-R11a-SM-DO11V 60-69 years, male 87108.8
GTEX-1GZHY-0011-R11a-SM-C1YRQ 50-59 years, female 80264.9
GTEX-ZE9C-0011-R11a-SM-4WKGG 60-69 years, male 72503.5
GTEX-13QIC-0011-R11b-SM-5O9BU 60-69 years, female 67528.8
GTEX-13NZA-0011-R11b-SM-5KM4W 60-69 years, male 66558.4
GTEX-13PVQ-0011-R11a-SM-5O9DU 50-59 years, male 66475.4
GTEX-N7MT-0011-R11A-SM-2I3DZ 60-69 years, female 65826.0
GTEX-1C64N-0011-R11b-SM-7P8Q6 50-59 years, male 61456.3
GTEX-1H4P4-0011-R11b-SM-CE6S8 50-59 years, male 61132.2
GTEX-132Q8-0011-R11b-SM-5DUW9 60-69 years, male 60848.3
GTEX-ZVT3-0011-R11b-SM-57WBI 60-69 years, female 60740.5
GTEX-11WQC-0011-R11b-SM-57WD6 60-69 years, male 60323.6
GTEX-11EMC-0011-R11b-SM-DNZZK 60-69 years, female 58657.0
GTEX-1M4P7-0011-R11b-SM-EXOIK 60-69 years, male 58521.6
GTEX-1BAJH-0011-R11b-SM-7IGLM 70-79 years, male 58261.5
GTEX-183WM-0011-R11a-SM-718A5 70-79 years, female 58144.0
GTEX-1IKOH-0011-R11a-SM-AHZ38 60-69 years, female 56980.4
GTEX-12WSD-0011-R11a-SM-9OSVC 60-69 years, female 54510.1
GTEX-1JMOU-0011-R11b-SM-EXUTA 60-69 years, female 52623.5
GTEX-16GPK-0011-R11b-SM-7MKFF 60-69 years, male 52562.5
GTEX-1R9K4-0011-R11a-SM-EZ6N9 60-69 years, male 52209.2
GTEX-145MI-0011-R11a-SM-5P9JZ 60-69 years, female 50155.1
GTEX-1F75W-0011-R11b-SM-AHZ34 60-69 years, male 48619.2
GTEX-1E1VI-0011-R11a-SM-9OSWI 50-59 years, male 48557.9
GTEX-17JCI-0011-R11a-SM-7189Y 60-69 years, female 46944.4
GTEX-1JJ6O-0011-R11b-SM-EXUS2 60-69 years, male 46226.1
GTEX-14BIN-0011-R11a-SM-5SI79 50-59 years, female 46056.1
GTEX-13OW8-0011-R11a-SM-5L3GT 60-69 years, male 45832.0
GTEX-1LVAO-0011-R11b-SM-EXOI8 60-69 years, male 45476.2
GTEX-14E7W-0011-R11a-SM-5ZZVA 70-79 years, male 45137.6
GTEX-1HCU6-0011-R11b-SM-AHZ2F 60-69 years, female 44734.9
GTEX-13FTY-0011-R11a-SM-5IJEA 40-49 years, female 44296.0
GTEX-12WSF-0011-R11a-SM-5LZVT 70-79 years, male 44220.8
GTEX-1EKGG-0011-R11a-SM-9QEHZ 60-69 years, male 44010.9
GTEX-1GMRU-0011-R11b-SM-C1YQ4 50-59 years, male 43502.8
GTEX-18A6Q-0011-R11a-SM-72D6H 60-69 years, male 42946.9
GTEX-1GF9W-0011-R11b-SM-9OSXG 60-69 years, male 42750.1
GTEX-ZE7O-0011-R11a-SM-57WBC 50-59 years, female 42042.9
GTEX-1I19N-0011-R11b-SM-ARU6Y 70-79 years, male 40782.0
GTEX-11ZTS-0011-R11a-SM-DO113 60-69 years, female 40474.7
GTEX-1JJEA-0011-R11a-SM-EXUTE 60-69 years, male 40000.3
GTEX-1J8EW-0011-R11a-SM-AHZ37 60-69 years, female 39835.7
GTEX-1I1HK-0011-R11a-SM-B2LVN 60-69 years, male 39538.9
GTEX-ZVZQ-0011-R11a-SM-51MS6 60-69 years, female 39310.5
GTEX-13X6I-0011-R11a-SM-5P9HN 60-69 years, male 38165.7
GTEX-13FHP-0011-R11b-SM-5LZXP 50-59 years, male 37982.6
GTEX-XMD1-0011-R11A-SM-4AT5J 60-69 years, male 37796.2
GTEX-1H3O1-0011-R11a-SM-A96RV 60-69 years, male 37671.1
GTEX-1IL2U-0011-R11a-SM-CE6SO 60-69 years, male 37415.4
GTEX-NL4W-0011-R11A-SM-2I3DW 50-59 years, male 37277.9
GTEX-1GMR8-0011-R11b-SM-9OSX2 50-59 years, female 36280.6
GTEX-UTHO-0011-R11A-SM-3GIJE 60-69 years, male 35639.4
GTEX-13X6J-0011-R11a-SM-5P9HE 50-59 years, male 35381.1
GTEX-145LU-0011-R11b-SM-5P9JX 50-59 years, male 35064.3
GTEX-13FLV-0011-R11a-SM-5LZZ7 50-59 years, male 34938.3
GTEX-WHSE-0011-R11A-SM-3P5YY 20-29 years, male 34643.3
GTEX-14C5O-0011-R11b-SM-6872H 60-69 years, male 34336.7
GTEX-13RTJ-0011-R11a-SM-5O9CK 60-69 years, male 34035.3
GTEX-NPJ7-0011-R11A-SM-2I3E8 60-69 years, female 33350.4
GTEX-1IGQW-0011-R11a-SM-C1YRV 60-69 years, male 32676.0
GTEX-1B933-0011-R11a-SM-7P8PM 50-59 years, female 32518.0
GTEX-11TTK-0011-R11b-SM-DO112 60-69 years, female 31553.1
GTEX-1J1OQ-0011-R11a-SM-A96S3 40-49 years, female 31529.8
GTEX-14E6D-0011-R11b-SM-664NP 50-59 years, male 31391.3
GTEX-14ASI-0011-R11b-SM-6AJBJ 60-69 years, male 31004.7
GTEX-15DCD-0011-R11a-SM-D4P1R 70-79 years, female 30914.3
GTEX-17EVP-0011-R11a-SM-7EWDL 40-49 years, male 30795.5
GTEX-11DZ1-0011-R11b-SM-DO11W 50-59 years, male 30674.8
GTEX-1H1DG-0011-R11a-SM-C1YQK 70-79 years, male 30581.3
GTEX-1GTWX-0011-R11b-SM-C1YQJ 60-69 years, male 30353.3
GTEX-12WSH-0011-R11a-SM-5LZVM 50-59 years, male 30318.5
GTEX-1F52S-0011-R11a-SM-CJI23 60-69 years, female 30199.9
GTEX-1313W-0011-R11a-SM-5DUXN 50-59 years, female 30068.8
GTEX-RU72-0011-R11A-SM-CM2U1 50-59 years, female 29962.8
GTEX-14BIM-0011-R11b-SM-5S2RN 60-69 years, female 29483.8
GTEX-TSE9-0011-R11A-SM-3DB7N 60-69 years, female 28854.5
GTEX-1GZ4I-0011-R11b-SM-9OSWR 50-59 years, male 28792.1
GTEX-1F48J-0011-R11b-SM-9OSWV 50-59 years, female 28501.8
GTEX-13S7M-0011-R11b-SM-5P9HU 60-69 years, female 28439.2
GTEX-1F75A-0011-R11a-SM-AHZ35 50-59 years, male 28396.5
GTEX-13CF2-0011-R11b-SM-5LZXO 60-69 years, male 28364.4
GTEX-13OW7-0011-R11a-SM-5O9DY 50-59 years, male 28357.0
GTEX-X261-0011-R11A-SM-4E3JY 50-59 years, male 28292.8
GTEX-13JUV-0011-R11a-SM-5LZYH 40-49 years, female 28177.5
GTEX-1H3NZ-0011-R11b-SM-CE6SF 60-69 years, male 27656.7
GTEX-1IL2V-0011-R11a-SM-ARU6T 70-79 years, male 27579.8
GTEX-12WSC-0011-R11a-SM-5GU5J 50-59 years, male 27560.6
GTEX-13NYB-0011-R11a-SM-5KM3Q 40-49 years, male 27454.8
GTEX-144GL-0011-R11b-SM-5P9F6 50-59 years, male 26860.1
GTEX-13SLW-0011-R11a-SM-5SI8Q 70-79 years, male 26652.2
GTEX-RVPV-0011-R11A-SM-2TF6F 60-69 years, male 26650.9
GTEX-1HSKV-0011-R11b-SM-AHZ2E 60-69 years, male 26574.3
GTEX-ZUA1-0011-R11b-SM-51MTI 40-49 years, male 26375.9
GTEX-12ZZZ-0011-R11a-SM-5EGLC 60-69 years, male 26245.6
GTEX-1CB4G-0011-R11a-SM-9OSWG 60-69 years, male 25852.9
GTEX-13JVG-0011-R11a-SM-5KM53 60-69 years, male 25798.3
GTEX-1N2DW-0011-R11b-SM-EXOIL 50-59 years, male 25776.7
GTEX-1IY9M-0011-R11b-SM-A96TI 60-69 years, male 25657.4
GTEX-1I1GQ-0011-R11b-SM-CKZPA 50-59 years, male 25581.4
GTEX-1I1GV-0011-R11a-SM-CJI3Z 60-69 years, male 25328.0
GTEX-145MH-0011-R11a-SM-5P9HQ 50-59 years, male 25026.6
GTEX-13O3O-0011-R11b-SM-5KM4G 60-69 years, female 25007.1
GTEX-QMR6-0011-R11A-SM-32PKK 50-59 years, male 25001.4
GTEX-14PN4-0011-R11a-SM-686ZW 50-59 years, male 24872.4
GTEX-1A3MX-0011-R11b-SM-7DUGP 60-69 years, male 24765.5
GTEX-13NYS-0011-R11b-SM-5MR4P 60-69 years, male 24541.9
GTEX-ZDXO-0011-R11a-SM-4WWD9 60-69 years, male 24531.1
GTEX-YJ89-0011-R11a-SM-4SOKA 60-69 years, male 24512.4
GTEX-1F6I4-0011-R11b-SM-9OSWS 60-69 years, male 24439.4
GTEX-1B8SF-0011-R11a-SM-79OOP 60-69 years, male 24213.4
GTEX-1HGF4-0011-R11a-SM-C1YRR 60-69 years, male 24211.2
GTEX-1HBPI-0011-R11b-SM-CE6SH 50-59 years, male 24173.4
GTEX-13FXS-0011-R11a-SM-5L3DM 50-59 years, male 24133.7
GTEX-1399T-0011-R11a-SM-5J2O1 60-69 years, male 23931.0
GTEX-13OVL-0011-R11b-SM-5L3G7 50-59 years, male 23644.6
GTEX-S7SE-0011-R11A-SM-2XCDD 50-59 years, male 23404.9
GTEX-Z93S-0011-R11a-SM-4RGNN 50-59 years, male 23329.9
GTEX-11ZUS-0011-R11b-SM-5BC7B 30-39 years, male 23239.9
GTEX-13N2G-0011-R11a-SM-5MR3F 60-69 years, male 23091.1
GTEX-WZTO-0011-R11A-SM-4E3K9 40-49 years, male 22934.7
GTEX-15G19-0011-R11b-SM-6LPIH 60-69 years, male 22848.8
GTEX-1KD4Q-0011-R11b-SM-EXOIE 40-49 years, male 22844.7
GTEX-15DYW-0011-R11a-SM-6LPIT 60-69 years, female 22774.3
GTEX-1H3VE-0011-R11b-SM-C1YRP 40-49 years, male 22696.7
GTEX-1LSVX-0011-R11b-SM-EXOIA 60-69 years, male 22480.4
GTEX-13OW5-0011-R11b-SM-5L3GG 60-69 years, male 22469.7
GTEX-1GN73-0011-R11b-SM-9OSX4 60-69 years, male 22390.5
GTEX-139TT-0011-R11b-SM-5LZV1 60-69 years, male 22226.9
GTEX-13G51-0011-R11b-SM-5J2NE 60-69 years, male 22206.2
GTEX-13VXU-0011-R11b-SM-5O9DJ 50-59 years, male 21976.5
GTEX-1F7RK-0011-R11b-SM-9QEI2 20-29 years, female 21873.3
GTEX-1I1GR-0011-R11a-SM-CM2T5 60-69 years, male 21861.7
GTEX-ZAB4-0011-R11a-SM-4SOKI 40-49 years, male 21776.0
GTEX-N7MS-0011-R11A-SM-2HMJS 60-69 years, male 20897.9
GTEX-1H1CY-0011-R11a-SM-C1YQR 60-69 years, female 20733.9
GTEX-1ICLZ-0011-R11a-SM-CJI3N 60-69 years, male 20614.7
GTEX-P44G-0011-R11A-SM-2I3FD 30-39 years, male 20546.5
GTEX-12WSM-0011-R11a-SM-5DUX8 60-69 years, male 20437.9
GTEX-1AX9I-0011-R11b-SM-7DHN4 60-69 years, male 20431.3
GTEX-11GSP-0011-R11b-SM-5NQ7V 60-69 years, female 20387.4
GTEX-Y8DK-0011-R11A-SM-4SOK2 60-69 years, male 20285.4
GTEX-12126-0011-R11a-SM-5BC6X 20-29 years, male 20279.9
GTEX-11OF3-0011-R11a-SM-57WCR 60-69 years, male 20139.4
GTEX-11PRG-0011-R11b-SM-DNZZY 50-59 years, male 19700.1
GTEX-16YQH-0011-R11b-SM-7LT98 30-39 years, male 19648.9
GTEX-18464-0011-R11a-SM-72D76 50-59 years, male 19521.8
GTEX-11DXY-0011-R11a-SM-DNZZN 60-69 years, male 19488.3
GTEX-WL46-0011-R11A-SM-3MJFT 50-59 years, male 19426.4
GTEX-13X6K-0011-R11a-SM-5P9F5 60-69 years, female 19115.7
GTEX-1B8L1-0011-R11b-SM-793DJ 60-69 years, male 18847.3
GTEX-T2IS-0011-R11A-SM-32QPC 20-29 years, female 18549.9
GTEX-13OVH-0011-R11b-SM-5KM4X 70-79 years, male 18448.8
GTEX-17HG3-0011-R11b-SM-7KFT4 30-39 years, female 18367.7
GTEX-131YS-0011-R11b-SM-5EGLM 60-69 years, female 18349.4
GTEX-14DAQ-0011-R11a-SM-664NO 60-69 years, female 18277.0
GTEX-13FHO-0011-R11b-SM-5LZYQ 60-69 years, male 18186.5
GTEX-14ABY-0011-R11a-SM-5SI7C 50-59 years, male 18158.3
GTEX-1R9PO-0011-R11b-SM-EZ6NB 60-69 years, female 18010.6
GTEX-17HII-0011-R11b-SM-7KFSX 50-59 years, male 17773.6
GTEX-15CHQ-0011-R11b-SM-686ZZ 60-69 years, male 17483.0
GTEX-12WSE-0011-R11b-SM-5P9JW 20-29 years, male 17399.7
GTEX-17F97-0011-R11b-SM-7KFRQ 50-59 years, male 17371.7
GTEX-12WSI-0011-R11b-SM-5P9EZ 50-59 years, male 17313.1
GTEX-YFC4-0011-R11a-SM-4SOK6 40-49 years, female 17263.5
GTEX-NPJ8-0011-R11A-SM-2YUMS 40-49 years, male 17171.7
GTEX-11H98-0011-R11b-SM-5NQ6U 50-59 years, male 17073.3
GTEX-15EO6-0011-R11b-SM-6M47M 50-59 years, male 17070.7
GTEX-NL3H-0011-R11A-SM-2I3E6 60-69 years, male 17015.2
GTEX-12ZZX-0011-R11a-SM-5DUVJ 40-49 years, female 17012.8
GTEX-13O3Q-0011-R11b-SM-5KM2W 50-59 years, male 16958.0
GTEX-T5JC-0011-R11A-SM-32PMB 20-29 years, male 16797.5
GTEX-18465-0011-R11a-SM-72D78 50-59 years, male 16593.0
GTEX-13SLX-0011-R11b-SM-5O9C8 50-59 years, female 16424.1
GTEX-1N2EE-0011-R11b-SM-EXOIJ 60-69 years, male 16326.2
GTEX-X4XX-0011-R11A-SM-46MWQ 60-69 years, male 16177.2
GTEX-1IDJH-0011-R11b-SM-C1YRT 70-79 years, male 16044.4
GTEX-1H1ZS-0011-R11a-SM-C1YQM 70-79 years, male 15985.0
GTEX-WWYW-0011-R11A-SM-3NB38 50-59 years, female 15941.0
GTEX-15ER7-0011-R11a-SM-6LPIL 20-29 years, female 15908.3
GTEX-1JMQJ-0011-R11a-SM-EXOJY 50-59 years, male 15405.9
GTEX-1LG7Y-0011-R11a-SM-EXOIH 50-59 years, male 15358.1
GTEX-11DYG-0011-R11a-SM-DNZZP 60-69 years, male 15291.8
GTEX-1HFI6-0011-R11b-SM-A96RU 40-49 years, male 14785.5
GTEX-1EMGI-0011-R11b-SM-9OSWX 60-69 years, male 14622.4
GTEX-1HB9E-0011-R11b-SM-ARU79 50-59 years, male 14592.3
GTEX-13OVJ-0011-R11a-SM-5P9H8 50-59 years, female 14560.8
GTEX-1IKK5-0011-R11a-SM-C1YRX 60-69 years, male 14168.2
GTEX-R55E-0011-R11A-SM-2TC6I 20-29 years, male 14122.6
GTEX-QDT8-0011-R11A-SM-32PKD 30-39 years, female 14075.2
GTEX-P44H-0011-R11A-SM-2XCER 40-49 years, male 13780.5
GTEX-131XH-0011-R11a-SM-5EGLN 50-59 years, male 13366.9
GTEX-13OW6-0011-R11a-SM-5L3H2 50-59 years, male 12281.6
GTEX-1I1GS-0011-R11a-SM-C1YRU 60-69 years, male 11420.2
GTEX-Q2AG-0011-R11A-SM-2HMKZ 40-49 years, female 10747.1
GTEX-WVLH-0011-R11A-SM-3MJFO 50-59 years, male 10240.4
GTEX-X4EP-0011-R11B-SM-4QASK 60-69 years, female 9886.0
GTEX-T6MN-0011-R11A-SM-32QOX 50-59 years, male 8783.5
GTEX-X585-0011-R11B-SM-46MUZ 50-59 years, male 5855.3
Show allShow less
Brain - Cerebellum
Average nTPM: 34180.7
Samples: 241

Max nTPM: 142670.4
Min nTPM: 11637.0
Std nTPM: 19915.1
Median nTPM: 28370.2
GTEX-1RNSC-3126-SM-EVR4V 60-69 years, male 142670.4
GTEX-1EH9U-3126-SM-7MXU5 60-69 years, male 135399.7
GTEX-1KANB-3226-SM-D4P3G 50-59 years, male 118461.9
GTEX-1E2YA-2926-SM-7MGWX 50-59 years, male 115050.0
GTEX-14PJO-2926-SM-686ZI 60-69 years, male 104914.2
GTEX-16Z82-2926-SM-6LPJJ 60-69 years, male 99052.6
GTEX-1E1VI-2926-SM-7IGLT 50-59 years, male 97437.8
GTEX-1269C-3126-SM-5EGI6 60-69 years, female 89474.1
GTEX-1EWIQ-3026-SM-7IGOJ 70-79 years, female 83281.9
GTEX-1JJE9-3026-SM-CNNPA 70-79 years, male 80793.6
GTEX-1QEPI-3026-SM-EXOIW 60-69 years, female 74037.2
GTEX-ZF28-2926-SM-4WKG1 60-69 years, male 73741.1
GTEX-11EI6-2926-SM-5985U 60-69 years, male 72364.1
GTEX-16XZZ-2926-SM-6LPK4 60-69 years, male 71268.3
GTEX-1B8SG-1926-SM-73KUB 50-59 years, male 71200.7
GTEX-OHPN-2626-SM-2I5H1 60-69 years, female 70044.1
GTEX-1BAJH-3126-SM-7MGXY 70-79 years, male 69887.9
GTEX-14E6D-2926-SM-664OP 50-59 years, male 69117.6
GTEX-1IKOH-2826-SM-CNNRC 60-69 years, female 65458.3
GTEX-14A5I-2826-SM-5SIBF 50-59 years, female 62609.5
GTEX-14JFF-2826-SM-6871Q 60-69 years, male 58240.4
GTEX-13PVQ-2926-SM-5L3HJ 50-59 years, male 57210.0
GTEX-1RQEC-3026-SM-DPRXM 60-69 years, male 54701.4
GTEX-1GZHY-3026-SM-7MXVA 50-59 years, female 53430.2
GTEX-183WM-2726-SM-7KFRF 70-79 years, female 52959.0
GTEX-11ZVC-3026-SM-59HJM 50-59 years, female 52239.0
GTEX-11ZTS-3226-SM-5EGID 60-69 years, female 50607.0
GTEX-1H3VE-2826-SM-9WPOL 40-49 years, male 50261.7
GTEX-1GF9V-3026-SM-7P8R8 60-69 years, male 50225.4
GTEX-1C6VR-3026-SM-7IGLW 60-69 years, male 49393.0
GTEX-1HSMO-2926-SM-C1YR5 60-69 years, male 49087.6
GTEX-NPJ7-2826-SM-2I3FU 60-69 years, female 48426.7
GTEX-1GTWX-2926-SM-7MXV4 60-69 years, male 48209.2
GTEX-1KD4Q-3026-SM-EV7A7 40-49 years, male 46563.8
GTEX-1H3O1-1826-SM-A96TO 60-69 years, male 45901.1
GTEX-145MG-3126-SM-5Q5D3 50-59 years, male 45059.9
GTEX-139TS-3126-SM-5LZWX 60-69 years, male 44286.3
GTEX-18A6Q-2826-SM-7LTAO 60-69 years, male 44277.6
GTEX-17JCI-3026-SM-7EWDR 60-69 years, female 44262.7
GTEX-1F52S-3026-SM-7P8PV 60-69 years, female 43687.1
GTEX-ZZPT-2926-SM-5EQ5S 50-59 years, male 43020.4
GTEX-11TTK-2826-SM-5GU5K 60-69 years, female 43002.1
GTEX-1399T-3126-SM-5IJFS 60-69 years, male 42962.1
GTEX-1EKGG-3126-SM-9WPO5 60-69 years, male 42866.7
GTEX-1H4P4-2726-SM-9JGGB 50-59 years, male 42756.2
GTEX-ZVT3-2926-SM-5GU6M 60-69 years, female 41915.0
GTEX-13RTJ-3126-SM-5S2Q4 60-69 years, male 41758.8
GTEX-147F4-3026-SM-5Q5BJ 50-59 years, male 41343.5
GTEX-1128S-2826-SM-5N9DI 60-69 years, female 41272.7
GTEX-1A8G7-3026-SM-73KTT 60-69 years, male 41205.1
GTEX-1H1DG-2826-SM-9JGHB 70-79 years, male 40326.0
GTEX-ZYFD-2926-SM-5GID9 50-59 years, male 40193.8
GTEX-P44G-2526-SM-2I5EK 30-39 years, male 39561.1
GTEX-PWO3-1026-SM-2I5F2 60-69 years, female 39530.6
GTEX-1H1CY-3026-SM-9OSW7 60-69 years, female 39287.2
GTEX-1HB9E-3126-SM-AHZ4M 50-59 years, male 39286.0
GTEX-13OW5-3126-SM-5MR3Y 60-69 years, male 39017.3
GTEX-1HBPH-3026-SM-9WPNY 40-49 years, female 38952.5
GTEX-144GL-2926-SM-5O99F 50-59 years, male 38938.0
GTEX-13OW8-2926-SM-5L3FV 60-69 years, male 38657.9
GTEX-13FHP-2926-SM-5IJG9 50-59 years, male 38656.3
GTEX-11EMC-3326-SM-5P9JH 60-69 years, female 38598.3
GTEX-1H3NZ-2926-SM-9WPQ8 60-69 years, male 38542.3
GTEX-132Q8-2926-SM-5IFFP 60-69 years, male 38320.1
GTEX-1I1HK-2726-SM-AHZ2M 60-69 years, male 38173.9
GTEX-1HCVE-2926-SM-9WPPJ 50-59 years, male 38132.3
GTEX-17EVQ-2726-SM-7EWDT 70-79 years, male 38059.9
GTEX-14C5O-2926-SM-5RQI1 60-69 years, male 37997.5
GTEX-13N2G-3126-SM-5IJGL 60-69 years, male 37918.2
GTEX-1F6IF-3026-SM-7P8QN 60-69 years, male 37887.6
GTEX-13OW7-2926-SM-5MR3Z 50-59 years, male 37835.1
GTEX-1JMOU-2826-SM-EV79R 60-69 years, female 37696.6
GTEX-1IL2V-3026-SM-CYPSA 70-79 years, male 37639.7
GTEX-1EX96-3126-SM-9JGGC 50-59 years, male 36259.5
GTEX-1JJ6O-3026-SM-C1YQH 60-69 years, male 36090.9
GTEX-13CF2-3026-SM-5IFFX 60-69 years, male 35932.3
GTEX-11ONC-3026-SM-5985W 60-69 years, male 35840.4
GTEX-N7MT-1226-SM-DKPOK 60-69 years, female 35381.2
GTEX-17HG3-2826-SM-7EPGO 30-39 years, female 35323.3
GTEX-1B8L1-3226-SM-7P8OX 60-69 years, male 35295.5
GTEX-1C6WA-3326-SM-7MKGN 60-69 years, male 34694.1
GTEX-ZAK1-2926-SM-5HL9S 50-59 years, female 34647.6
GTEX-ZAB4-2926-SM-57WCV 40-49 years, male 34645.9
GTEX-15SHU-3026-SM-6LPIB 40-49 years, female 34389.6
GTEX-1CB4H-3026-SM-79OLX 60-69 years, female 34338.4
GTEX-11DXW-1026-SM-5H11K 40-49 years, male 34187.2
GTEX-14BIN-3326-SM-5Q5E6 50-59 years, female 34186.9
GTEX-1F75W-3126-SM-7P8SJ 60-69 years, male 33858.4
GTEX-1RDX4-3226-SM-DPS14 50-59 years, female 33764.0
GTEX-XMD1-2826-SM-4AT5F 60-69 years, male 33701.8
GTEX-131YS-3026-SM-5EGHY 60-69 years, female 33543.5
GTEX-11OC5-0626-SM-5HL6M 60-69 years, male 33022.9
GTEX-111FC-3326-SM-5GZYV 60-69 years, male 32685.7
GTEX-17HII-2926-SM-79OMK 50-59 years, male 32344.4
GTEX-1A8G6-3126-SM-731D8 60-69 years, male 31847.1
GTEX-12WSM-2126-SM-5GCOC 60-69 years, male 31740.0
GTEX-147GR-3126-SM-5S2PM 60-69 years, male 31564.0
GTEX-ZDXO-2926-SM-4WKFM 60-69 years, male 31272.6
GTEX-1JMQJ-3126-SM-EV79G 50-59 years, male 31262.1
GTEX-12ZZZ-3126-SM-5LZU6 60-69 years, male 30838.7
GTEX-12WSD-3026-SM-5LZU7 60-69 years, female 30407.5
GTEX-11DZ1-2926-SM-5A5KI 50-59 years, male 30317.7
GTEX-YFC4-3026-SM-5IFJK 40-49 years, female 30261.3
GTEX-13G51-3126-SM-5IJG7 60-69 years, male 30200.7
GTEX-ZYY3-3026-SM-5GIEJ 60-69 years, female 29949.9
GTEX-1HBPI-2726-SM-9WPPF 50-59 years, male 29834.1
GTEX-1R46S-3126-SM-DPRZ9 60-69 years, female 29764.1
GTEX-1C64N-3126-SM-79OO3 50-59 years, male 29745.0
GTEX-1I1CD-2926-SM-A96SJ 60-69 years, female 29482.4
GTEX-X261-3126-SM-4PQZC 50-59 years, male 29390.4
GTEX-14JG1-2926-SM-686ZK 40-49 years, male 29085.7
GTEX-Y111-2826-SM-4TT3O 50-59 years, male 29037.0
GTEX-1GN73-3026-SM-7MXV8 60-69 years, male 28847.1
GTEX-1JMQK-2926-SM-D4P2T 60-69 years, male 28843.8
GTEX-145LU-2626-SM-5LU9Z 50-59 years, male 28695.0
GTEX-R55E-2526-SM-2TC6H 20-29 years, male 28602.9
GTEX-14BIM-3126-SM-5Q5C7 60-69 years, female 28548.2
GTEX-13X6K-2826-SM-5O9DS 60-69 years, female 28526.6
GTEX-1I1GV-3026-SM-CNNR9 60-69 years, male 28489.6
GTEX-13112-2926-SM-5DUWT 50-59 years, male 28480.7
GTEX-11DYG-2926-SM-5H132 60-69 years, male 28370.2
GTEX-1CB4G-2926-SM-7MKFQ 60-69 years, male 28271.1
GTEX-YJ89-2926-SM-5P9IT 60-69 years, male 27943.6
GTEX-12WSC-2926-SM-5BC5Z 50-59 years, male 27883.7
GTEX-13FHO-2926-SM-5L3ES 60-69 years, male 27744.2
GTEX-13OVL-3026-SM-5IJF1 50-59 years, male 27676.3
GTEX-11DXY-3126-SM-5N9BT 60-69 years, male 27660.4
GTEX-14ABY-3026-SM-664NE 50-59 years, male 27565.3
GTEX-14PN4-3026-SM-664O4 50-59 years, male 27267.3
GTEX-16YQH-2926-SM-6LPJE 30-39 years, male 27048.9
GTEX-1F75A-2926-SM-7MXVN 50-59 years, male 26990.1
GTEX-14BMV-2926-SM-5TDEE 50-59 years, male 26898.6
GTEX-1HSKV-2926-SM-B2LWJ 60-69 years, male 26878.6
GTEX-1F48J-2726-SM-7P8PW 50-59 years, female 26728.9
GTEX-13VXU-3026-SM-5LU3K 50-59 years, male 26603.3
GTEX-1MJK2-3026-SM-EV7A5 50-59 years, male 26565.8
GTEX-11GSO-3026-SM-5Q5AL 60-69 years, male 26491.4
GTEX-1JMLX-3026-SM-EV79Q 50-59 years, male 26487.3
GTEX-13O3O-3026-SM-5KM42 60-69 years, female 26339.9
GTEX-14JIY-2326-SM-6AJAJ 60-69 years, male 26156.5
GTEX-12WSH-3126-SM-5LZW8 50-59 years, male 26126.5
GTEX-QMR6-1326-SM-32PLB 50-59 years, male 26122.1
GTEX-XLM4-2926-SM-4AT59 60-69 years, male 25854.0
GTEX-1H1ZS-2926-SM-9WPP2 70-79 years, male 25827.7
GTEX-117XS-3126-SM-5GIDP 60-69 years, male 25739.8
GTEX-1192X-3226-SM-5987D 50-59 years, male 25728.1
GTEX-1GF9W-2726-SM-9JGGW 60-69 years, male 25696.3
GTEX-13FXS-3026-SM-5LZYO 50-59 years, male 25574.1
GTEX-11NUK-3026-SM-5986K 50-59 years, male 25513.3
GTEX-15ER7-3026-SM-6M47W 20-29 years, female 25286.8
GTEX-14C39-3026-SM-5S2QE 40-49 years, male 25282.1
GTEX-13S7M-3026-SM-5S2QQ 60-69 years, female 25233.5
GTEX-13O3Q-3026-SM-5IJGD 50-59 years, male 25222.4
GTEX-Y8DK-0726-SM-4TT3S 60-69 years, male 25189.1
GTEX-1PIIG-2826-SM-DTX7O 30-39 years, male 24923.2
GTEX-1313W-3026-SM-5LZUZ 50-59 years, female 24916.7
GTEX-15G19-2826-SM-6M48K 60-69 years, male 24896.1
GTEX-13OVH-2926-SM-5IJFH 70-79 years, male 24776.6
GTEX-Z93S-2826-SM-57WBL 50-59 years, male 24741.9
GTEX-QVUS-2926-SM-3GIJB 60-69 years, female 24477.8
GTEX-11ZUS-2826-SM-5EQKW 30-39 years, male 24464.9
GTEX-1B996-2926-SM-7MXUH 60-69 years, male 24350.9
GTEX-1IY9M-3126-SM-AHZ3A 60-69 years, male 24166.9
GTEX-1KWVE-2226-SM-CXZKN 30-39 years, male 24017.2
GTEX-13QIC-3026-SM-5LU58 60-69 years, female 23965.0
GTEX-1GZ4I-2926-SM-9JGGO 50-59 years, male 23913.8
GTEX-1JN1M-3126-SM-AHZ4E 60-69 years, female 23885.9
GTEX-1GZ2Q-3026-SM-9JGG3 40-49 years, male 23389.3
GTEX-1JJEA-2926-SM-C1YSK 60-69 years, male 23255.5
GTEX-145MH-2926-SM-5Q5D2 50-59 years, male 23238.7
GTEX-NPJ8-2626-SM-2D7W2 40-49 years, male 23128.0
GTEX-13NYB-3226-SM-5J2ND 40-49 years, male 23040.1
GTEX-13JUV-3026-SM-5K7WX 40-49 years, female 23009.5
GTEX-1EU9M-2926-SM-793DF 60-69 years, male 22880.4
GTEX-17HHY-2926-SM-79OJW 50-59 years, male 22871.4
GTEX-14PJM-3026-SM-6LLHM 50-59 years, female 22809.1
GTEX-11GSP-3126-SM-5A5LL 60-69 years, female 22719.4
GTEX-WVLH-2926-SM-3MJG5 50-59 years, male 22704.8
GTEX-TSE9-2926-SM-3DB77 60-69 years, female 22490.7
GTEX-1NV8Z-3026-SM-DTX8Z 60-69 years, male 22170.5
GTEX-13X6I-2926-SM-5Q5C3 60-69 years, male 22117.8
GTEX-17F97-2926-SM-7DUEQ 50-59 years, male 22075.5
GTEX-139TT-2626-SM-5LZUB 60-69 years, male 21977.6
GTEX-15DYW-3026-SM-7KFRM 60-69 years, female 21931.4
GTEX-14E7W-2926-SM-5S2R8 70-79 years, male 21673.9
GTEX-UTHO-2926-SM-3P5Z9 60-69 years, male 21646.0
GTEX-12WSE-2926-SM-5RQJ9 20-29 years, male 21506.6
GTEX-1POEN-2726-SM-E9U6B 30-39 years, female 21446.7
GTEX-1F6I4-3026-SM-7P8SI 60-69 years, male 21413.9
GTEX-1LSVX-2826-SM-EVR58 60-69 years, male 21394.7
GTEX-RU72-2926-SM-2TF66 50-59 years, female 21333.2
GTEX-13X6J-2926-SM-7EPGP 50-59 years, male 21262.0
GTEX-N7MS-2526-SM-2D7W3 60-69 years, male 21227.3
GTEX-WZTO-2826-SM-3NM8P 40-49 years, male 21010.9
GTEX-11NV4-2226-SM-5BC4T 60-69 years, male 20974.6
GTEX-1B8SF-3026-SM-731DX 60-69 years, male 20881.5
GTEX-1P4AB-3026-SM-EXOJS 50-59 years, male 20828.9
GTEX-1J1OQ-3126-SM-D4P2O 40-49 years, female 20579.7
GTEX-12126-0926-SM-5FQTW 20-29 years, male 20465.0
GTEX-1A3MX-2926-SM-718B7 60-69 years, male 20457.4
GTEX-T2IS-2926-SM-32QPO 20-29 years, female 20348.4
GTEX-Q2AG-2826-SM-2HMJQ 40-49 years, female 20342.3
GTEX-RNOR-2226-SM-2TF5O 50-59 years, female 20332.3
GTEX-13SLX-3226-SM-5YYA6 50-59 years, female 19860.8
GTEX-1QP6S-3026-SM-EAZ4N 40-49 years, male 19848.0
GTEX-QVJO-1325-SM-2S1QX 60-69 years, female 19810.5
GTEX-ZUA1-2926-SM-59HL3 40-49 years, male 19760.5
GTEX-145MF-2826-SM-7EPGU 50-59 years, male 19740.1
GTEX-11PRG-2826-SM-5BC54 50-59 years, male 19655.7
GTEX-S7SE-2526-SM-2XCDL 50-59 years, male 19462.8
GTEX-11O72-2826-SM-5HL6W 40-49 years, male 19394.7
GTEX-12ZZY-2926-SM-5DUXO 60-69 years, male 19265.5
GTEX-13OVJ-2726-SM-5IJG6 50-59 years, female 18838.2
GTEX-WHSE-2926-SM-3NMBG 20-29 years, male 18698.8
GTEX-18465-2926-SM-7KFSE 50-59 years, male 18562.2
GTEX-T5JC-2326-SM-32PMR 20-29 years, male 18540.6
GTEX-1B933-3026-SM-731DB 50-59 years, female 18485.6
GTEX-PVOW-2626-SM-32PL8 40-49 years, male 18477.0
GTEX-1LG7Y-3126-SM-EV7AS 50-59 years, male 18438.7
GTEX-12ZZX-2826-SM-5BC6K 40-49 years, female 18285.9
GTEX-145LS-3026-SM-5O99S 60-69 years, female 18207.8
GTEX-13JVG-3226-SM-5IJGJ 60-69 years, male 18078.8
GTEX-17EVP-2926-SM-793BU 40-49 years, male 17639.1
GTEX-T6MN-2526-SM-32PMN 50-59 years, male 17594.6
GTEX-X4XX-2926-SM-3NMB1 60-69 years, male 17591.6
GTEX-1PWST-3026-SM-EAZ3H 70-79 years, male 17509.8
GTEX-ZAJG-3026-SM-5HL92 50-59 years, female 17415.1
GTEX-1EMGI-3126-SM-7MXUR 60-69 years, male 17395.4
GTEX-WWYW-3026-SM-3NB36 50-59 years, female 17289.4
GTEX-WL46-2826-SM-3LK81 50-59 years, male 17206.2
GTEX-14ASI-2926-SM-5Q5DG 60-69 years, male 17167.3
GTEX-14DAQ-3026-SM-5S2QZ 60-69 years, female 16950.6
GTEX-1JMPZ-2826-SM-C1YRA 30-39 years, male 16257.7
GTEX-131XH-2926-SM-5LZU4 50-59 years, male 15965.1
GTEX-13OW6-2926-SM-5KM29 50-59 years, male 15744.7
GTEX-15EO6-2926-SM-6M48D 50-59 years, male 15548.0
GTEX-1IDJH-3126-SM-C1YQS 70-79 years, male 14933.9
GTEX-QDT8-3026-SM-32PKB 30-39 years, female 14645.1
GTEX-P44H-2426-SM-2XCEJ 40-49 years, male 14269.6
GTEX-1R9PO-2826-SM-E6CPV 60-69 years, female 13215.2
GTEX-X4EP-3026-SM-3P5YP 60-69 years, female 11637.0
Show allShow less

CEREBELLUM - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

35977.4
Pig sample Sample description nTPM
Cerebellum
nTPM: 35977.5
Samples: 4

Max nTPM: 57184.1
Min nTPM: 23800.7
Sample A Female 57184.1
Sample B Female 29335.0
Sample C Male 33590.0
Sample D Male 23800.7

CEREBELLUM - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

23855.0
Mouse sample Sample description nTPM
Cerebellum
nTPM: 23855.1
Samples: 4

Max nTPM: 24719.8
Min nTPM: 22081.9
Sample A Male 24537.9
Sample B Male 24719.8
Sample C Female 22081.9
Sample D Female 24080.6

CEREBELLUM - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

14.3
Allen experiment id Experiment description Expression energy
Cerebellum
Expression energy: 14.3
74357773 Antisense, RP_051219_04_A07, Mouse strain C57BL/6J (56 days, male) 14.3

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