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BRAIN CEREBELLUM Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Cerebellum
CEREBELLUM - Expression summary
Protein expression
Cerebellumi

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Cells in granular layer: Medium
Cells in molecular layer: Low
Purkinje cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:18245.0 nTPM
HPA Brain:17308.8 nTPM
GTEx:18245.0 nTPM
Pig:5016.3 nTPM
Mouse:10697.2 nTPM
Allen mouse:16.2 Expression energy

CEREBELLUM - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA068400Antibody CAB032215
Purkinje cells MediumMedium
Cells in granular layer Not detectedMedium
Cells in molecular layer LowLow




CEREBELLUM - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

17308.8
Sample id Sample description nTPM
Cerebellar cortex
nTPM: 13106.1
1769 Male, age 76, right hemisphere 35761.8
1774 Male, age 80, left hemisphere 17195.4
1768 Female, age 72, unknown 13347.7
2055 Female, age 91, right hemisphere 11594.0
2003 Female, age 85, right hemisphere 10601.8
1788 Male, age 55, unknown 6873.4
2006 Male, age 61, right hemisphere 5201.3
2101 Male, age 74, right hemisphere 4273.2
Cerebellar nuclei
nTPM: 13681.2
2882 Male, age 76, left hemisphere 30500.5
2177 Female, age 85, both hemispheres 23158.4
2005 Male, age 80, left hemisphere 12951.5
2175 Male, age 61, right hemisphere 12578.0
1871 Male, age 74, unknown 11498.6
1879 Male, age 55, unknown 9745.3
1966 Female, age 91, left hemisphere 9510.7
2783 Female, age 72, unknown 7244.6
2318 Male, age 74, left hemisphere 5943.0
Flocculonodular lobe
nTPM: 16653.9
1767 Male, age 76, left hemisphere 32499.3
1771 Male, age 80, left hemisphere 22873.8
1765 Male, age 55, unknown 20798.9
2176 Female, age 91, right hemisphere 16747.3
1792 Male, age 74, unknown 10104.0
1835 Female, age 85, right hemisphere 9593.8
2004 Male, age 61, right hemisphere 3960.1
Vermis
nTPM: 17308.8
1770 Male, age 76, left hemisphere 45577.8
1766 Male, age 55, unknown 25691.3
1778 Female, age 91, left hemisphere 25164.0
2834 Male, age 80, left hemisphere 14489.5
1825 Male, age 74, unknown 11980.3
1751 Male, age 74, right hemisphere 11819.3
1988 Female, age 85, left hemisphere 9508.3
2460 Male, age 61, both hemispheres 6504.9
1928 Female, age 72, unknown 5044.1

CEREBELLUM - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

18245.0
GTEx sample id Sample description nTPM
Brain - Cerebellar Hemisphere
Average nTPM: 17646.3
Samples: 215

Max nTPM: 114340.3
Min nTPM: 1826.5
Std nTPM: 18248.5
Median nTPM: 11774.3
GTEX-131XW-0011-R11a-SM-5DUV9 50-59 years, female 114340.3
GTEX-1CAV2-0011-R11a-SM-ARU8D 40-49 years, female 112185.0
GTEX-1LKK1-0011-R11a-SM-EXOIG 50-59 years, female 100306.2
GTEX-139UW-0011-R11a-SM-5IJGN 60-69 years, male 95608.6
GTEX-1IOXB-0011-R11a-SM-A9G1X 50-59 years, male 89400.7
GTEX-ZF28-0011-R11a-SM-4WWEI 60-69 years, male 87571.7
GTEX-16NPV-0011-R11a-SM-7IGMK 50-59 years, female 79304.4
GTEX-1J8Q2-0011-R11a-SM-A9SKI 60-69 years, male 73981.3
GTEX-13PLJ-0011-R11b-SM-5O9BS 60-69 years, female 64552.1
GTEX-OHPN-0011-R11A-SM-2I5FM 60-69 years, female 58873.9
GTEX-1B8SG-0011-R11a-SM-7P8PF 50-59 years, male 57673.1
GTEX-13CZV-0011-R11b-SM-5N9FN 60-69 years, male 52533.1
GTEX-14C39-0011-R11b-SM-5YYAF 40-49 years, male 49855.6
GTEX-16XZZ-0011-R11a-SM-7EPI3 60-69 years, male 45860.6
GTEX-16Z82-0011-R11a-SM-79OKJ 60-69 years, male 44472.0
GTEX-1HUB1-0011-R11b-SM-CE6SC 60-69 years, male 43009.7
GTEX-13PVQ-0011-R11a-SM-5O9DU 50-59 years, male 39915.7
GTEX-1GZHY-0011-R11a-SM-C1YRQ 50-59 years, female 37585.4
GTEX-17EVQ-0011-R11a-SM-7LT9C 70-79 years, male 34120.3
GTEX-11EI6-0011-R11a-SM-DO11V 60-69 years, male 33525.8
GTEX-13NZA-0011-R11b-SM-5KM4W 60-69 years, male 33488.0
GTEX-ZE9C-0011-R11a-SM-4WKGG 60-69 years, male 31483.9
GTEX-145MI-0011-R11a-SM-5P9JZ 60-69 years, female 31346.9
GTEX-1H4P4-0011-R11b-SM-CE6S8 50-59 years, male 29579.2
GTEX-1C64N-0011-R11b-SM-7P8Q6 50-59 years, male 28342.9
GTEX-1BAJH-0011-R11b-SM-7IGLM 70-79 years, male 28040.0
GTEX-13QIC-0011-R11b-SM-5O9BU 60-69 years, female 27480.0
GTEX-11WQC-0011-R11b-SM-57WD6 60-69 years, male 26928.0
GTEX-N7MT-0011-R11A-SM-2I3DZ 60-69 years, female 26223.9
GTEX-1M4P7-0011-R11b-SM-EXOIK 60-69 years, male 25155.4
GTEX-1JMOU-0011-R11b-SM-EXUTA 60-69 years, female 24870.6
GTEX-183WM-0011-R11a-SM-718A5 70-79 years, female 24860.0
GTEX-12WSD-0011-R11a-SM-9OSVC 60-69 years, female 24408.2
GTEX-1IKOH-0011-R11a-SM-AHZ38 60-69 years, female 23970.5
GTEX-1GMRU-0011-R11b-SM-C1YQ4 50-59 years, male 23652.9
GTEX-1E1VI-0011-R11a-SM-9OSWI 50-59 years, male 23626.3
GTEX-1F75W-0011-R11b-SM-AHZ34 60-69 years, male 22635.7
GTEX-ZVT3-0011-R11b-SM-57WBI 60-69 years, female 22398.6
GTEX-17JCI-0011-R11a-SM-7189Y 60-69 years, female 21549.1
GTEX-ZE7O-0011-R11a-SM-57WBC 50-59 years, female 21406.7
GTEX-NL4W-0011-R11A-SM-2I3DW 50-59 years, male 20562.0
GTEX-1R9K4-0011-R11a-SM-EZ6N9 60-69 years, male 20360.2
GTEX-14BIN-0011-R11a-SM-5SI79 50-59 years, female 20221.2
GTEX-16GPK-0011-R11b-SM-7MKFF 60-69 years, male 20112.3
GTEX-132Q8-0011-R11b-SM-5DUW9 60-69 years, male 20089.6
GTEX-1J8EW-0011-R11a-SM-AHZ37 60-69 years, female 20032.2
GTEX-1JJ6O-0011-R11b-SM-EXUS2 60-69 years, male 19851.5
GTEX-13FTY-0011-R11a-SM-5IJEA 40-49 years, female 19816.1
GTEX-13OW8-0011-R11a-SM-5L3GT 60-69 years, male 19678.4
GTEX-1HCU6-0011-R11b-SM-AHZ2F 60-69 years, female 19312.0
GTEX-NPJ7-0011-R11A-SM-2I3E8 60-69 years, female 19290.5
GTEX-18A6Q-0011-R11a-SM-72D6H 60-69 years, male 19163.1
GTEX-1I1HK-0011-R11a-SM-B2LVN 60-69 years, male 18763.6
GTEX-1JJEA-0011-R11a-SM-EXUTE 60-69 years, male 18750.1
GTEX-14E7W-0011-R11a-SM-5ZZVA 70-79 years, male 18620.7
GTEX-UTHO-0011-R11A-SM-3GIJE 60-69 years, male 18533.9
GTEX-1GMR8-0011-R11b-SM-9OSX2 50-59 years, female 18211.2
GTEX-11EMC-0011-R11b-SM-DNZZK 60-69 years, female 18182.7
GTEX-WHSE-0011-R11A-SM-3P5YY 20-29 years, male 18074.8
GTEX-1EKGG-0011-R11a-SM-9QEHZ 60-69 years, male 17782.4
GTEX-ZVZQ-0011-R11a-SM-51MS6 60-69 years, female 17338.7
GTEX-12WSF-0011-R11a-SM-5LZVT 70-79 years, male 17298.6
GTEX-1H3O1-0011-R11a-SM-A96RV 60-69 years, male 17253.8
GTEX-1GTWX-0011-R11b-SM-C1YQJ 60-69 years, male 17230.5
GTEX-13X6I-0011-R11a-SM-5P9HN 60-69 years, male 16631.8
GTEX-1GF9W-0011-R11b-SM-9OSXG 60-69 years, male 16539.8
GTEX-1I19N-0011-R11b-SM-ARU6Y 70-79 years, male 16388.1
GTEX-1IL2U-0011-R11a-SM-CE6SO 60-69 years, male 16333.1
GTEX-1B933-0011-R11a-SM-7P8PM 50-59 years, female 16184.5
GTEX-1H1DG-0011-R11a-SM-C1YQK 70-79 years, male 15877.9
GTEX-1LVAO-0011-R11b-SM-EXOI8 60-69 years, male 15855.8
GTEX-13FHP-0011-R11b-SM-5LZXP 50-59 years, male 15182.3
GTEX-1F52S-0011-R11a-SM-CJI23 60-69 years, female 15118.2
GTEX-12WSH-0011-R11a-SM-5LZVM 50-59 years, male 15025.9
GTEX-13OW7-0011-R11a-SM-5O9DY 50-59 years, male 14695.3
GTEX-RVPV-0011-R11A-SM-2TF6F 60-69 years, male 14671.9
GTEX-14ASI-0011-R11b-SM-6AJBJ 60-69 years, male 14284.9
GTEX-13JVG-0011-R11a-SM-5KM53 60-69 years, male 14283.2
GTEX-X261-0011-R11A-SM-4E3JY 50-59 years, male 14060.4
GTEX-XMD1-0011-R11A-SM-4AT5J 60-69 years, male 14053.7
GTEX-1I1GV-0011-R11a-SM-CJI3Z 60-69 years, male 13906.0
GTEX-1IGQW-0011-R11a-SM-C1YRV 60-69 years, male 13906.0
GTEX-11ZTS-0011-R11a-SM-DO113 60-69 years, female 13802.0
GTEX-ZUA1-0011-R11b-SM-51MTI 40-49 years, male 13744.9
GTEX-13X6J-0011-R11a-SM-5P9HE 50-59 years, male 13549.8
GTEX-13RTJ-0011-R11a-SM-5O9CK 60-69 years, male 13483.5
GTEX-14E6D-0011-R11b-SM-664NP 50-59 years, male 13472.3
GTEX-1J1OQ-0011-R11a-SM-A96S3 40-49 years, female 13385.4
GTEX-P44G-0011-R11A-SM-2I3FD 30-39 years, male 13371.9
GTEX-14BIM-0011-R11b-SM-5S2RN 60-69 years, female 13306.4
GTEX-13CF2-0011-R11b-SM-5LZXO 60-69 years, male 13286.8
GTEX-1GZ4I-0011-R11b-SM-9OSWR 50-59 years, male 13135.9
GTEX-1N2DW-0011-R11b-SM-EXOIL 50-59 years, male 13132.3
GTEX-1H3NZ-0011-R11b-SM-CE6SF 60-69 years, male 12814.3
GTEX-1I1GQ-0011-R11b-SM-CKZPA 50-59 years, male 12786.7
GTEX-1F75A-0011-R11a-SM-AHZ35 50-59 years, male 12511.0
GTEX-1A3MX-0011-R11b-SM-7DUGP 60-69 years, male 12416.0
GTEX-17EVP-0011-R11a-SM-7EWDL 40-49 years, male 12411.6
GTEX-13FLV-0011-R11a-SM-5LZZ7 50-59 years, male 12406.7
GTEX-13SLW-0011-R11a-SM-5SI8Q 70-79 years, male 12361.2
GTEX-13JUV-0011-R11a-SM-5LZYH 40-49 years, female 12141.7
GTEX-1F48J-0011-R11b-SM-9OSWV 50-59 years, female 12121.4
GTEX-RU72-0011-R11A-SM-CM2U1 50-59 years, female 12050.3
GTEX-11DZ1-0011-R11b-SM-DO11W 50-59 years, male 11980.1
GTEX-1H3VE-0011-R11b-SM-C1YRP 40-49 years, male 11899.5
GTEX-145LU-0011-R11b-SM-5P9JX 50-59 years, male 11822.9
GTEX-15DCD-0011-R11a-SM-D4P1R 70-79 years, female 11783.8
GTEX-1B8SF-0011-R11a-SM-79OOP 60-69 years, male 11774.3
GTEX-QMR6-0011-R11A-SM-32PKK 50-59 years, male 11683.1
GTEX-1IL2V-0011-R11a-SM-ARU6T 70-79 years, male 11638.2
GTEX-13S7M-0011-R11b-SM-5P9HU 60-69 years, female 11501.6
GTEX-TSE9-0011-R11A-SM-3DB7N 60-69 years, female 11464.8
GTEX-1HSKV-0011-R11b-SM-AHZ2E 60-69 years, male 11407.3
GTEX-13O3O-0011-R11b-SM-5KM4G 60-69 years, female 11378.1
GTEX-1HGF4-0011-R11a-SM-C1YRR 60-69 years, male 11274.4
GTEX-NPJ8-0011-R11A-SM-2YUMS 40-49 years, male 11134.1
GTEX-1AX9I-0011-R11b-SM-7DHN4 60-69 years, male 11107.6
GTEX-1IY9M-0011-R11b-SM-A96TI 60-69 years, male 11057.8
GTEX-1LSVX-0011-R11b-SM-EXOIA 60-69 years, male 10956.9
GTEX-1CB4G-0011-R11a-SM-9OSWG 60-69 years, male 10890.5
GTEX-144GL-0011-R11b-SM-5P9F6 50-59 years, male 10839.1
GTEX-13N2G-0011-R11a-SM-5MR3F 60-69 years, male 10702.2
GTEX-13OVL-0011-R11b-SM-5L3G7 50-59 years, male 10611.9
GTEX-1KD4Q-0011-R11b-SM-EXOIE 40-49 years, male 10599.8
GTEX-15DYW-0011-R11a-SM-6LPIT 60-69 years, female 10583.0
GTEX-12WSC-0011-R11a-SM-5GU5J 50-59 years, male 10581.8
GTEX-1F6I4-0011-R11b-SM-9OSWS 60-69 years, male 10556.4
GTEX-1313W-0011-R11a-SM-5DUXN 50-59 years, female 10556.1
GTEX-1ICLZ-0011-R11a-SM-CJI3N 60-69 years, male 10376.4
GTEX-N7MS-0011-R11A-SM-2HMJS 60-69 years, male 10278.9
GTEX-12ZZZ-0011-R11a-SM-5EGLC 60-69 years, male 10268.6
GTEX-145MH-0011-R11a-SM-5P9HQ 50-59 years, male 10234.3
GTEX-1HBPI-0011-R11b-SM-CE6SH 50-59 years, male 10150.8
GTEX-T2IS-0011-R11A-SM-32QPC 20-29 years, female 10091.0
GTEX-1F7RK-0011-R11b-SM-9QEI2 20-29 years, female 10059.6
GTEX-13FXS-0011-R11a-SM-5L3DM 50-59 years, male 9929.6
GTEX-1GN73-0011-R11b-SM-9OSX4 60-69 years, male 9860.8
GTEX-YJ89-0011-R11a-SM-4SOKA 60-69 years, male 9771.3
GTEX-14PN4-0011-R11a-SM-686ZW 50-59 years, male 9763.6
GTEX-ZDXO-0011-R11a-SM-4WWD9 60-69 years, male 9669.9
GTEX-11TTK-0011-R11b-SM-DO112 60-69 years, female 9667.1
GTEX-13OW5-0011-R11b-SM-5L3GG 60-69 years, male 9635.4
GTEX-Z93S-0011-R11a-SM-4RGNN 50-59 years, male 9617.5
GTEX-11ZUS-0011-R11b-SM-5BC7B 30-39 years, male 9586.2
GTEX-13NYB-0011-R11a-SM-5KM3Q 40-49 years, male 9480.4
GTEX-1N2EE-0011-R11b-SM-EXOIJ 60-69 years, male 9469.3
GTEX-S7SE-0011-R11A-SM-2XCDD 50-59 years, male 9441.5
GTEX-15G19-0011-R11b-SM-6LPIH 60-69 years, male 9383.0
GTEX-WZTO-0011-R11A-SM-4E3K9 40-49 years, male 9294.4
GTEX-139TT-0011-R11b-SM-5LZV1 60-69 years, male 9189.1
GTEX-1I1GR-0011-R11a-SM-CM2T5 60-69 years, male 9161.6
GTEX-11GSP-0011-R11b-SM-5NQ7V 60-69 years, female 9152.5
GTEX-NL3H-0011-R11A-SM-2I3E6 60-69 years, male 9010.0
GTEX-13VXU-0011-R11b-SM-5O9DJ 50-59 years, male 8909.6
GTEX-13G51-0011-R11b-SM-5J2NE 60-69 years, male 8867.9
GTEX-1399T-0011-R11a-SM-5J2O1 60-69 years, male 8859.7
GTEX-Y8DK-0011-R11A-SM-4SOK2 60-69 years, male 8777.3
GTEX-13NYS-0011-R11b-SM-5MR4P 60-69 years, male 8723.5
GTEX-WL46-0011-R11A-SM-3MJFT 50-59 years, male 8717.6
GTEX-1H1CY-0011-R11a-SM-C1YQR 60-69 years, female 8671.7
GTEX-11OF3-0011-R11a-SM-57WCR 60-69 years, male 8658.5
GTEX-12126-0011-R11a-SM-5BC6X 20-29 years, male 8637.4
GTEX-1R9PO-0011-R11b-SM-EZ6NB 60-69 years, female 8569.9
GTEX-18464-0011-R11a-SM-72D76 50-59 years, male 8539.8
GTEX-11H98-0011-R11b-SM-5NQ6U 50-59 years, male 8394.3
GTEX-12WSI-0011-R11b-SM-5P9EZ 50-59 years, male 8262.0
GTEX-12WSM-0011-R11a-SM-5DUX8 60-69 years, male 8230.5
GTEX-14ABY-0011-R11a-SM-5SI7C 50-59 years, male 8206.2
GTEX-R55E-0011-R11A-SM-2TC6I 20-29 years, male 8170.9
GTEX-13FHO-0011-R11b-SM-5LZYQ 60-69 years, male 8101.9
GTEX-Q2AG-0011-R11A-SM-2HMKZ 40-49 years, female 8093.8
GTEX-14DAQ-0011-R11a-SM-664NO 60-69 years, female 7952.9
GTEX-1EMGI-0011-R11b-SM-9OSWX 60-69 years, male 7817.7
GTEX-13OVH-0011-R11b-SM-5KM4X 70-79 years, male 7766.3
GTEX-WWYW-0011-R11A-SM-3NB38 50-59 years, female 7733.4
GTEX-11DXY-0011-R11a-SM-DNZZN 60-69 years, male 7563.7
GTEX-1B8L1-0011-R11b-SM-793DJ 60-69 years, male 7469.5
GTEX-16YQH-0011-R11b-SM-7LT98 30-39 years, male 7445.2
GTEX-14C5O-0011-R11b-SM-6872H 60-69 years, male 7442.4
GTEX-12WSE-0011-R11b-SM-5P9JW 20-29 years, male 7429.7
GTEX-1IDJH-0011-R11b-SM-C1YRT 70-79 years, male 7383.6
GTEX-1H1ZS-0011-R11a-SM-C1YQM 70-79 years, male 7367.5
GTEX-ZAB4-0011-R11a-SM-4SOKI 40-49 years, male 7293.0
GTEX-18465-0011-R11a-SM-72D78 50-59 years, male 7228.3
GTEX-T5JC-0011-R11A-SM-32PMB 20-29 years, male 7218.4
GTEX-1HFI6-0011-R11b-SM-A96RU 40-49 years, male 7141.8
GTEX-13OVJ-0011-R11a-SM-5P9H8 50-59 years, female 7112.4
GTEX-1HB9E-0011-R11b-SM-ARU79 50-59 years, male 7012.3
GTEX-11PRG-0011-R11b-SM-DNZZY 50-59 years, male 6978.0
GTEX-15CHQ-0011-R11b-SM-686ZZ 60-69 years, male 6858.3
GTEX-15ER7-0011-R11a-SM-6LPIL 20-29 years, female 6835.9
GTEX-X4XX-0011-R11A-SM-46MWQ 60-69 years, male 6827.9
GTEX-13O3Q-0011-R11b-SM-5KM2W 50-59 years, male 6800.0
GTEX-131YS-0011-R11b-SM-5EGLM 60-69 years, female 6794.5
GTEX-12ZZX-0011-R11a-SM-5DUVJ 40-49 years, female 6683.9
GTEX-YFC4-0011-R11a-SM-4SOK6 40-49 years, female 6683.2
GTEX-17HII-0011-R11b-SM-7KFSX 50-59 years, male 6504.2
GTEX-1I1GS-0011-R11a-SM-C1YRU 60-69 years, male 6496.2
GTEX-1IKK5-0011-R11a-SM-C1YRX 60-69 years, male 6456.8
GTEX-17F97-0011-R11b-SM-7KFRQ 50-59 years, male 6351.9
GTEX-1LG7Y-0011-R11a-SM-EXOIH 50-59 years, male 6318.9
GTEX-13SLX-0011-R11b-SM-5O9C8 50-59 years, female 6178.6
GTEX-17HG3-0011-R11b-SM-7KFT4 30-39 years, female 6143.7
GTEX-QDT8-0011-R11A-SM-32PKD 30-39 years, female 6135.9
GTEX-13X6K-0011-R11a-SM-5P9F5 60-69 years, female 6003.5
GTEX-P44H-0011-R11A-SM-2XCER 40-49 years, male 5846.2
GTEX-13OW6-0011-R11a-SM-5L3H2 50-59 years, male 5818.6
GTEX-1JMQJ-0011-R11a-SM-EXOJY 50-59 years, male 5768.2
GTEX-15EO6-0011-R11b-SM-6M47M 50-59 years, male 5384.0
GTEX-11DYG-0011-R11a-SM-DNZZP 60-69 years, male 5258.6
GTEX-131XH-0011-R11a-SM-5EGLN 50-59 years, male 4752.6
GTEX-WVLH-0011-R11A-SM-3MJFO 50-59 years, male 4352.1
GTEX-T6MN-0011-R11A-SM-32QOX 50-59 years, male 4221.5
GTEX-X4EP-0011-R11B-SM-4QASK 60-69 years, female 2234.6
GTEX-X585-0011-R11B-SM-46MUZ 50-59 years, male 1826.5
Show allShow less
Brain - Cerebellum
Average nTPM: 18245.0
Samples: 241

Max nTPM: 76557.6
Min nTPM: 3742.7
Std nTPM: 11184.5
Median nTPM: 14487.7
GTEX-1E2YA-2926-SM-7MGWX 50-59 years, male 76557.6
GTEX-1RNSC-3126-SM-EVR4V 60-69 years, male 69599.0
GTEX-1EH9U-3126-SM-7MXU5 60-69 years, male 61964.0
GTEX-1KANB-3226-SM-D4P3G 50-59 years, male 60748.7
GTEX-16Z82-2926-SM-6LPJJ 60-69 years, male 58913.0
GTEX-1EWIQ-3026-SM-7IGOJ 70-79 years, female 57030.3
GTEX-14PJO-2926-SM-686ZI 60-69 years, male 56850.8
GTEX-1E1VI-2926-SM-7IGLT 50-59 years, male 55507.7
GTEX-1269C-3126-SM-5EGI6 60-69 years, female 49488.4
GTEX-1JJE9-3026-SM-CNNPA 70-79 years, male 47066.2
GTEX-1B8SG-1926-SM-73KUB 50-59 years, male 46366.7
GTEX-OHPN-2626-SM-2I5H1 60-69 years, female 42055.3
GTEX-16XZZ-2926-SM-6LPK4 60-69 years, male 40508.9
GTEX-1QEPI-3026-SM-EXOIW 60-69 years, female 39789.2
GTEX-ZF28-2926-SM-4WKG1 60-69 years, male 38567.3
GTEX-13PVQ-2926-SM-5L3HJ 50-59 years, male 37014.3
GTEX-1BAJH-3126-SM-7MGXY 70-79 years, male 36438.6
GTEX-14E6D-2926-SM-664OP 50-59 years, male 36330.2
GTEX-11EI6-2926-SM-5985U 60-69 years, male 36124.8
GTEX-14A5I-2826-SM-5SIBF 50-59 years, female 35128.3
GTEX-1IKOH-2826-SM-CNNRC 60-69 years, female 32590.3
GTEX-11ZVC-3026-SM-59HJM 50-59 years, female 30053.6
GTEX-1GTWX-2926-SM-7MXV4 60-69 years, male 28909.4
GTEX-1GF9V-3026-SM-7P8R8 60-69 years, male 28717.2
GTEX-P44G-2526-SM-2I5EK 30-39 years, male 28714.5
GTEX-PWO3-1026-SM-2I5F2 60-69 years, female 28560.1
GTEX-1A8G7-3026-SM-73KTT 60-69 years, male 28527.5
GTEX-145MG-3126-SM-5Q5D3 50-59 years, male 28296.0
GTEX-1RQEC-3026-SM-DPRXM 60-69 years, male 28153.3
GTEX-1HSMO-2926-SM-C1YR5 60-69 years, male 27881.2
GTEX-ZZPT-2926-SM-5EQ5S 50-59 years, male 27552.5
GTEX-11ZTS-3226-SM-5EGID 60-69 years, female 27015.0
GTEX-17JCI-3026-SM-7EWDR 60-69 years, female 26890.7
GTEX-NPJ7-2826-SM-2I3FU 60-69 years, female 26712.2
GTEX-1H3VE-2826-SM-9WPOL 40-49 years, male 26543.6
GTEX-1KD4Q-3026-SM-EV7A7 40-49 years, male 26049.1
GTEX-18A6Q-2826-SM-7LTAO 60-69 years, male 26012.8
GTEX-1GZHY-3026-SM-7MXVA 50-59 years, female 25614.8
GTEX-1F6IF-3026-SM-7P8QN 60-69 years, male 24989.7
GTEX-1C6VR-3026-SM-7IGLW 60-69 years, male 24915.5
GTEX-183WM-2726-SM-7KFRF 70-79 years, female 24736.0
GTEX-13OW7-2926-SM-5MR3Z 50-59 years, male 24705.0
GTEX-14JFF-2826-SM-6871Q 60-69 years, male 24362.5
GTEX-1H4P4-2726-SM-9JGGB 50-59 years, male 23743.2
GTEX-1H3O1-1826-SM-A96TO 60-69 years, male 23624.8
GTEX-1H1DG-2826-SM-9JGHB 70-79 years, male 22208.7
GTEX-1F52S-3026-SM-7P8PV 60-69 years, female 21972.6
GTEX-139TS-3126-SM-5LZWX 60-69 years, male 21903.7
GTEX-1128S-2826-SM-5N9DI 60-69 years, female 21860.3
GTEX-1399T-3126-SM-5IJFS 60-69 years, male 21314.7
GTEX-13RTJ-3126-SM-5S2Q4 60-69 years, male 21122.7
GTEX-1HB9E-3126-SM-AHZ4M 50-59 years, male 21119.3
GTEX-ZVT3-2926-SM-5GU6M 60-69 years, female 20581.5
GTEX-11TTK-2826-SM-5GU5K 60-69 years, female 20452.1
GTEX-11ONC-3026-SM-5985W 60-69 years, male 20406.5
GTEX-ZYFD-2926-SM-5GID9 50-59 years, male 20379.5
GTEX-13N2G-3126-SM-5IJGL 60-69 years, male 20364.5
GTEX-1I1HK-2726-SM-AHZ2M 60-69 years, male 20236.2
GTEX-147F4-3026-SM-5Q5BJ 50-59 years, male 20141.2
GTEX-1JMOU-2826-SM-EV79R 60-69 years, female 20091.1
GTEX-1C6WA-3326-SM-7MKGN 60-69 years, male 20044.6
GTEX-1B8L1-3226-SM-7P8OX 60-69 years, male 20019.2
GTEX-13OW5-3126-SM-5MR3Y 60-69 years, male 19880.2
GTEX-1H3NZ-2926-SM-9WPQ8 60-69 years, male 19664.8
GTEX-1HBPH-3026-SM-9WPNY 40-49 years, female 19352.3
GTEX-1H1CY-3026-SM-9OSW7 60-69 years, female 19199.4
GTEX-13CF2-3026-SM-5IFFX 60-69 years, male 19095.5
GTEX-13FHP-2926-SM-5IJG9 50-59 years, male 18912.6
GTEX-144GL-2926-SM-5O99F 50-59 years, male 18831.2
GTEX-R55E-2526-SM-2TC6H 20-29 years, male 18812.0
GTEX-13OW8-2926-SM-5L3FV 60-69 years, male 18624.6
GTEX-17EVQ-2726-SM-7EWDT 70-79 years, male 18602.1
GTEX-14BIN-3326-SM-5Q5E6 50-59 years, female 18484.2
GTEX-1EKGG-3126-SM-9WPO5 60-69 years, male 18469.1
GTEX-17HG3-2826-SM-7EPGO 30-39 years, female 18424.0
GTEX-1EX96-3126-SM-9JGGC 50-59 years, male 18404.8
GTEX-15SHU-3026-SM-6LPIB 40-49 years, female 18388.4
GTEX-1F75W-3126-SM-7P8SJ 60-69 years, male 18223.0
GTEX-12ZZZ-3126-SM-5LZU6 60-69 years, male 18178.6
GTEX-ZAK1-2926-SM-5HL9S 50-59 years, female 17967.2
GTEX-17HII-2926-SM-79OMK 50-59 years, male 17759.0
GTEX-13G51-3126-SM-5IJG7 60-69 years, male 17665.9
GTEX-X261-3126-SM-4PQZC 50-59 years, male 17617.0
GTEX-1JN1M-3126-SM-AHZ4E 60-69 years, female 17548.8
GTEX-ZYY3-3026-SM-5GIEJ 60-69 years, female 17461.1
GTEX-11DXW-1026-SM-5H11K 40-49 years, male 17438.7
GTEX-1JJ6O-3026-SM-C1YQH 60-69 years, male 17334.3
GTEX-111FC-3326-SM-5GZYV 60-69 years, male 17254.4
GTEX-1C64N-3126-SM-79OO3 50-59 years, male 17140.6
GTEX-1I1GV-3026-SM-CNNR9 60-69 years, male 17057.4
GTEX-132Q8-2926-SM-5IFFP 60-69 years, male 17007.4
GTEX-131YS-3026-SM-5EGHY 60-69 years, female 17004.1
GTEX-1IL2V-3026-SM-CYPSA 70-79 years, male 16741.8
GTEX-QMR6-1326-SM-32PLB 50-59 years, male 16679.3
GTEX-1A8G6-3126-SM-731D8 60-69 years, male 16613.6
GTEX-11EMC-3326-SM-5P9JH 60-69 years, female 16609.2
GTEX-YFC4-3026-SM-5IFJK 40-49 years, female 16606.0
GTEX-ZDXO-2926-SM-4WKFM 60-69 years, male 16468.7
GTEX-12WSD-3026-SM-5LZU7 60-69 years, female 16456.3
GTEX-NPJ8-2626-SM-2D7W2 40-49 years, male 16402.4
GTEX-1HBPI-2726-SM-9WPPF 50-59 years, male 16391.2
GTEX-12WSM-2126-SM-5GCOC 60-69 years, male 16159.9
GTEX-11DXY-3126-SM-5N9BT 60-69 years, male 16114.5
GTEX-11OC5-0626-SM-5HL6M 60-69 years, male 16006.9
GTEX-1I1CD-2926-SM-A96SJ 60-69 years, female 16006.3
GTEX-1JMQK-2926-SM-D4P2T 60-69 years, male 15820.2
GTEX-13112-2926-SM-5DUWT 50-59 years, male 15796.9
GTEX-12WSC-2926-SM-5BC5Z 50-59 years, male 15595.5
GTEX-Y111-2826-SM-4TT3O 50-59 years, male 15381.0
GTEX-12WSH-3126-SM-5LZW8 50-59 years, male 15364.9
GTEX-11DZ1-2926-SM-5A5KI 50-59 years, male 15237.8
GTEX-1CB4H-3026-SM-79OLX 60-69 years, female 15158.7
GTEX-147GR-3126-SM-5S2PM 60-69 years, male 15054.1
GTEX-1HCVE-2926-SM-9WPPJ 50-59 years, male 15025.1
GTEX-ZAB4-2926-SM-57WCV 40-49 years, male 14978.1
GTEX-11GSO-3026-SM-5Q5AL 60-69 years, male 14904.1
GTEX-16YQH-2926-SM-6LPJE 30-39 years, male 14710.8
GTEX-17HHY-2926-SM-79OJW 50-59 years, male 14582.4
GTEX-Y8DK-0726-SM-4TT3S 60-69 years, male 14516.6
GTEX-1CB4G-2926-SM-7MKFQ 60-69 years, male 14507.2
GTEX-1KWVE-2226-SM-CXZKN 30-39 years, male 14487.7
GTEX-1RDX4-3226-SM-DPS14 50-59 years, female 14326.4
GTEX-T2IS-2926-SM-32QPO 20-29 years, female 14239.1
GTEX-14ABY-3026-SM-664NE 50-59 years, male 14238.6
GTEX-13VXU-3026-SM-5LU3K 50-59 years, male 14185.0
GTEX-1GN73-3026-SM-7MXV8 60-69 years, male 14183.4
GTEX-14C39-3026-SM-5S2QE 40-49 years, male 14151.8
GTEX-15ER7-3026-SM-6M47W 20-29 years, female 14145.0
GTEX-Z93S-2826-SM-57WBL 50-59 years, male 14121.7
GTEX-13FXS-3026-SM-5LZYO 50-59 years, male 14114.4
GTEX-1HSKV-2926-SM-B2LWJ 60-69 years, male 14093.0
GTEX-14BMV-2926-SM-5TDEE 50-59 years, male 14039.2
GTEX-1F75A-2926-SM-7MXVN 50-59 years, male 14024.6
GTEX-XMD1-2826-SM-4AT5F 60-69 years, male 14016.5
GTEX-YJ89-2926-SM-5P9IT 60-69 years, male 13997.6
GTEX-14JG1-2926-SM-686ZK 40-49 years, male 13958.4
GTEX-1JMQJ-3126-SM-EV79G 50-59 years, male 13950.0
GTEX-11DYG-2926-SM-5H132 60-69 years, male 13918.1
GTEX-Q2AG-2826-SM-2HMJQ 40-49 years, female 13894.2
GTEX-145LU-2626-SM-5LU9Z 50-59 years, male 13825.3
GTEX-14BIM-3126-SM-5Q5C7 60-69 years, female 13821.0
GTEX-1MJK2-3026-SM-EV7A5 50-59 years, male 13765.7
GTEX-ZUA1-2926-SM-59HL3 40-49 years, male 13730.9
GTEX-13OVL-3026-SM-5IJF1 50-59 years, male 13550.5
GTEX-13O3O-3026-SM-5KM42 60-69 years, female 13431.5
GTEX-11NUK-3026-SM-5986K 50-59 years, male 13397.4
GTEX-117XS-3126-SM-5GIDP 60-69 years, male 13365.3
GTEX-14JIY-2326-SM-6AJAJ 60-69 years, male 13314.5
GTEX-1JMLX-3026-SM-EV79Q 50-59 years, male 13274.0
GTEX-14PN4-3026-SM-664O4 50-59 years, male 13226.2
GTEX-11ZUS-2826-SM-5EQKW 30-39 years, male 13163.8
GTEX-QVUS-2926-SM-3GIJB 60-69 years, female 13125.5
GTEX-11GSP-3126-SM-5A5LL 60-69 years, female 13053.7
GTEX-1PIIG-2826-SM-DTX7O 30-39 years, male 13037.9
GTEX-1IY9M-3126-SM-AHZ3A 60-69 years, male 13012.9
GTEX-1R46S-3126-SM-DPRZ9 60-69 years, female 12874.9
GTEX-13OVH-2926-SM-5IJFH 70-79 years, male 12871.9
GTEX-1313W-3026-SM-5LZUZ 50-59 years, female 12864.5
GTEX-13O3Q-3026-SM-5IJGD 50-59 years, male 12859.3
GTEX-1F48J-2726-SM-7P8PW 50-59 years, female 12837.4
GTEX-RU72-2926-SM-2TF66 50-59 years, female 12801.5
GTEX-WVLH-2926-SM-3MJG5 50-59 years, male 12704.0
GTEX-WZTO-2826-SM-3NM8P 40-49 years, male 12652.3
GTEX-145MH-2926-SM-5Q5D2 50-59 years, male 12645.5
GTEX-RNOR-2226-SM-2TF5O 50-59 years, female 12633.3
GTEX-N7MS-2526-SM-2D7W3 60-69 years, male 12510.7
GTEX-13QIC-3026-SM-5LU58 60-69 years, female 12385.1
GTEX-1EU9M-2926-SM-793DF 60-69 years, male 12338.5
GTEX-13X6K-2826-SM-5O9DS 60-69 years, female 12336.7
GTEX-1GZ4I-2926-SM-9JGGO 50-59 years, male 12324.4
GTEX-13FHO-2926-SM-5L3ES 60-69 years, male 12308.0
GTEX-17F97-2926-SM-7DUEQ 50-59 years, male 12304.5
GTEX-QVJO-1325-SM-2S1QX 60-69 years, female 12290.0
GTEX-N7MT-1226-SM-DKPOK 60-69 years, female 12281.6
GTEX-13JUV-3026-SM-5K7WX 40-49 years, female 12278.8
GTEX-13X6J-2926-SM-7EPGP 50-59 years, male 12207.9
GTEX-1JJEA-2926-SM-C1YSK 60-69 years, male 12206.3
GTEX-12126-0926-SM-5FQTW 20-29 years, male 12111.6
GTEX-15G19-2826-SM-6M48K 60-69 years, male 12068.6
GTEX-1192X-3226-SM-5987D 50-59 years, male 12050.5
GTEX-139TT-2626-SM-5LZUB 60-69 years, male 11838.7
GTEX-13S7M-3026-SM-5S2QQ 60-69 years, female 11819.5
GTEX-1H1ZS-2926-SM-9WPP2 70-79 years, male 11801.1
GTEX-13X6I-2926-SM-5Q5C3 60-69 years, male 11797.7
GTEX-14C5O-2926-SM-5RQI1 60-69 years, male 11750.4
GTEX-XLM4-2926-SM-4AT59 60-69 years, male 11630.9
GTEX-12WSE-2926-SM-5RQJ9 20-29 years, male 11566.5
GTEX-14PJM-3026-SM-6LLHM 50-59 years, female 11364.5
GTEX-14E7W-2926-SM-5S2R8 70-79 years, male 11277.0
GTEX-15DYW-3026-SM-7KFRM 60-69 years, female 11269.6
GTEX-145MF-2826-SM-7EPGU 50-59 years, male 11227.6
GTEX-1A3MX-2926-SM-718B7 60-69 years, male 11164.7
GTEX-17EVP-2926-SM-793BU 40-49 years, male 11098.9
GTEX-WL46-2826-SM-3LK81 50-59 years, male 11095.4
GTEX-1B8SF-3026-SM-731DX 60-69 years, male 11053.1
GTEX-13OVJ-2726-SM-5IJG6 50-59 years, female 11002.5
GTEX-1B933-3026-SM-731DB 50-59 years, female 10999.1
GTEX-1EMGI-3126-SM-7MXUR 60-69 years, male 10958.0
GTEX-1LSVX-2826-SM-EVR58 60-69 years, male 10941.0
GTEX-11PRG-2826-SM-5BC54 50-59 years, male 10854.1
GTEX-WHSE-2926-SM-3NMBG 20-29 years, male 10810.2
GTEX-1POEN-2726-SM-E9U6B 30-39 years, female 10707.3
GTEX-1NV8Z-3026-SM-DTX8Z 60-69 years, male 10656.2
GTEX-1P4AB-3026-SM-EXOJS 50-59 years, male 10588.0
GTEX-13JVG-3226-SM-5IJGJ 60-69 years, male 10561.5
GTEX-TSE9-2926-SM-3DB77 60-69 years, female 10475.3
GTEX-1GZ2Q-3026-SM-9JGG3 40-49 years, male 10367.7
GTEX-S7SE-2526-SM-2XCDL 50-59 years, male 10337.2
GTEX-1F6I4-3026-SM-7P8SI 60-69 years, male 10266.2
GTEX-UTHO-2926-SM-3P5Z9 60-69 years, male 10059.7
GTEX-13SLX-3226-SM-5YYA6 50-59 years, female 10053.8
GTEX-PVOW-2626-SM-32PL8 40-49 years, male 9971.8
GTEX-X4XX-2926-SM-3NMB1 60-69 years, male 9950.3
GTEX-1QP6S-3026-SM-EAZ4N 40-49 years, male 9924.0
GTEX-12ZZY-2926-SM-5DUXO 60-69 years, male 9790.6
GTEX-T5JC-2326-SM-32PMR 20-29 years, male 9715.3
GTEX-13OW6-2926-SM-5KM29 50-59 years, male 9685.5
GTEX-1J1OQ-3126-SM-D4P2O 40-49 years, female 9655.6
GTEX-14ASI-2926-SM-5Q5DG 60-69 years, male 9469.3
GTEX-1B996-2926-SM-7MXUH 60-69 years, male 9380.4
GTEX-14DAQ-3026-SM-5S2QZ 60-69 years, female 9379.6
GTEX-12ZZX-2826-SM-5BC6K 40-49 years, female 9319.6
GTEX-18465-2926-SM-7KFSE 50-59 years, male 9311.0
GTEX-1LG7Y-3126-SM-EV7AS 50-59 years, male 9301.7
GTEX-11NV4-2226-SM-5BC4T 60-69 years, male 9212.0
GTEX-ZAJG-3026-SM-5HL92 50-59 years, female 9179.2
GTEX-145LS-3026-SM-5O99S 60-69 years, female 9177.2
GTEX-1GF9W-2726-SM-9JGGW 60-69 years, male 9177.2
GTEX-11O72-2826-SM-5HL6W 40-49 years, male 9131.3
GTEX-T6MN-2526-SM-32PMN 50-59 years, male 9075.6
GTEX-1PWST-3026-SM-EAZ3H 70-79 years, male 9060.9
GTEX-131XH-2926-SM-5LZU4 50-59 years, male 9047.4
GTEX-WWYW-3026-SM-3NB36 50-59 years, female 8878.5
GTEX-13NYB-3226-SM-5J2ND 40-49 years, male 8791.8
GTEX-QDT8-3026-SM-32PKB 30-39 years, female 8577.1
GTEX-P44H-2426-SM-2XCEJ 40-49 years, male 8359.7
GTEX-1IDJH-3126-SM-C1YQS 70-79 years, male 8234.7
GTEX-1R9PO-2826-SM-E6CPV 60-69 years, female 8122.1
GTEX-15EO6-2926-SM-6M48D 50-59 years, male 7279.8
GTEX-1JMPZ-2826-SM-C1YRA 30-39 years, male 5998.7
GTEX-X4EP-3026-SM-3P5YP 60-69 years, female 3742.7
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CEREBELLUM - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

5016.3
Pig sample Sample description nTPM
Cerebellum
nTPM: 5016.4
Samples: 4

Max nTPM: 7175.3
Min nTPM: 4086.2
Sample A Female 7175.3
Sample B Female 4293.8
Sample C Male 4510.2
Sample D Male 4086.2

CEREBELLUM - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

10697.2
Mouse sample Sample description nTPM
Cerebellum
nTPM: 10697.2
Samples: 4

Max nTPM: 11101.4
Min nTPM: 10087.3
Sample A Male 10908.9
Sample B Male 11101.4
Sample C Female 10087.3
Sample D Female 10691.2

CEREBELLUM - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

16.2
Allen experiment id Experiment description Expression energy
Cerebellum
Expression energy: 16.2
74357767 Antisense, RP_051219_04_A06, Mouse strain C57BL/6J (56 days, male) 16.8
81600594 Antisense, RP_090205_01_D02, Mouse strain C57BL/6J (56 days, male) 15.5

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