HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:14505.4 nTPM
HPA Brain:17965.5 nTPM
GTEx:14505.4 nTPM
Pig:10435.5 nTPM
Mouse:5223.5 nTPM
Allen mouse:22.5 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 17965.5
Sample id Sample description nTPM
Hippocampus
nTPM: 17850.0
2621 Female, age 67, right hemisphere 30483.5
2529 Female, age 94, left hemisphere 19905.0
1855 Male, age 76, left hemisphere 17772.6
2148 Female, age 91, left hemisphere 17541.6
1911 Female, age 85, right hemisphere 13202.5
1898 Male, age 80, left hemisphere 8194.8
Dentate gyrus
nTPM: 16212.9
2531 Female, age 67, both hemispheres 27416.0
2530 Female, age 94, left hemisphere 27159.6
2246 Female, age 85, both hemispheres 18179.4
2010 Male, age 76, both hemispheres 9640.8
2528 Male, age 74, both hemispheres 8207.0
1927 Female, age 91, both hemispheres 6674.4
Entorhinal gyrus
nTPM: 13586.6
2686 Male, age 75, right hemisphere 26679.2
2613 Female, age 94, left hemisphere 18847.2
2117 Female, age 91, right hemisphere 11128.6
1938 Female, age 85, left hemisphere 10015.9
2764 Male, age 80, right hemisphere 7510.9
1787 Male, age 76, left hemisphere 7337.9
Hippocampus, CA1
nTPM: 10840.2
2527 Male, age 74, both hemispheres 16070.2
2045 Male, age 76, both hemispheres 11754.9
1873 Female, age 85, both hemispheres 10865.5
2749 Male, age 80, left hemisphere 9344.0
2082 Female, age 91, right hemisphere 6166.4
Hippocampus, CA2
nTPM: 10738.7
2437 Female, age 94, left hemisphere 21490.5
1892 Male, age 76, both hemispheres 11181.6
1940 Female, age 85, left hemisphere 10764.0
2113 Female, age 91, right hemisphere 9162.8
2249 Male, age 74, both hemispheres 5918.4
1963 Male, age 80, left hemisphere 5914.9
Hippocampus, CA3
nTPM: 17965.5
2861 Female, age 67, both hemispheres 51529.3
2620 Female, age 94, left hemisphere 15159.8
2137 Male, age 80, left hemisphere 11424.9
1867 Male, age 76, both hemispheres 11063.2
1891 Female, age 85, both hemispheres 9579.9
2436 Male, age 74, both hemispheres 9035.9
Parahippocampal cortex
nTPM: 15965.2
2622 Female, age 67, right hemisphere 27895.2
2245 Female, age 91, both hemispheres 27427.7
2692 Male, age 74, both hemispheres 22983.3
2532 Female, age 72, left hemisphere 19826.9
2018 Male, age 76, both hemispheres 13207.5
2693 Female, age 94, both hemispheres 13123.2
2250 Female, age 67, right hemisphere 11696.4
1933 Female, age 85, both hemispheres 9121.2
1850 Male, age 80, both hemispheres 7940.4
1990 Female, age 91, right hemisphere 6430.2
Perirhinal gyrus
nTPM: 7523.0
2848 Male, age 76, right hemisphere 10769.2
2521 Female, age 94, right hemisphere 8450.9
1841 Female, age 85, right hemisphere 7747.3
1794 Male, age 80, right hemisphere 5333.1
1847 Female, age 91, left hemisphere 5314.4
Subiculum
nTPM: 13754.5
2438 Female, age 94, left hemisphere 27272.8
2619 Male, age 74, both hemispheres 17674.3
2042 Male, age 76, both hemispheres 13425.6
1901 Male, age 80, both hemispheres 10020.3
1977 Female, age 85, both hemispheres 8357.6
2729 Female, age 91, right hemisphere 5776.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 14505.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 14505.4
Samples: 197

Max nTPM: 108890.9
Min nTPM: 1910.4
Std nTPM: 13370.5
Median nTPM: 9948.8
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 108890.9
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 61493.0
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 57104.8
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 56822.2
GTEX-1E1VI-0011-R1a-SM-ARZMM 50-59 years, male 49729.0
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 45528.6
GTEX-1GZHY-0011-R1a-SM-CE6RR 50-59 years, female 43842.9
GTEX-1GN2E-0011-R1b-SM-CE6RJ 60-69 years, male 43621.6
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 43006.2
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 40034.3
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 39909.9
Show allShow less

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 10435.5
Pig sample Sample description nTPM
Subiculum
nTPM: 9194.5
Samples: 4

Max nTPM: 13053.7
Min nTPM: 7296.9
Sample A Female 13053.7
Sample B Female 7296.9
Sample C Male 7902.8
Sample D Male 8524.5
Dorsal hippocampus
nTPM: 9059.6
Samples: 4

Max nTPM: 10884.7
Min nTPM: 7354.1
Sample A Female 10402.7
Sample B Female 7597.0
Sample C Male 10884.7
Sample D Male 7354.1
Entorhinal cortex
nTPM: 10435.5
Samples: 4

Max nTPM: 11403.2
Min nTPM: 9971.2
Sample A Female 10134.0
Sample B Female 10233.5
Sample C Male 11403.2
Sample D Male 9971.2
Ventral hippocampus
nTPM: 7861.9
Samples: 4

Max nTPM: 9910.9
Min nTPM: 6226.6
Sample A Female 9910.9
Sample B Female 8220.4
Sample C Male 6226.6
Sample D Male 7089.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 5223.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 5223.5
Samples: 4

Max nTPM: 5569.5
Min nTPM: 4656.6
Sample A Male 5569.5
Sample B Male 4656.6
Sample C Female 5458.8
Sample D Female 5209.2
Hippocampal formation
nTPM: 4004.0
Samples: 4

Max nTPM: 4959.8
Min nTPM: 3458.5
Sample A Male 4959.8
Sample B Male 3724.8
Sample C Female 3458.5
Sample D Female 3872.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 22.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 22.5
75080269 Antisense, RP_060412_06_H09, Mouse strain C57BL/6J (56 days, male) 22.8
73906215 Antisense, RP_051212_04_H07, Mouse strain C57BL/6J (56 days, male) 22.3

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org