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BRAIN MEDULLA OBLONGATA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Medulla oblongata
MEDULLA OBLONGATA - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
HPA Brain:135.5 nTPM
FANTOM5:40.0 Scaled Tags Per Million

MEDULLA OBLONGATA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

135.5
Sample id Sample description nTPM
Area postrema
nTPM: 118.3
2799 Male, age 61, both hemispheres 129.9
2306 Male, age 80, both hemispheres 115.3
2054 Male, age 76, both hemispheres 109.8
Dorsal medullary reticular nucleus
nTPM: 99.2
2373 Male, age 61, both hemispheres 102.6
2040 Female, age 85, both hemispheres 100.2
2088 Male, age 76, both hemispheres 94.9
Dorsal motor vagal complex
nTPM: 106.3
2797 Male, age 61, both hemispheres 122.1
2807 Female, age 85, both hemispheres 115.4
2813 Female, age 72, unknown 114.1
2000 Male, age 74, unknown 103.0
2844 Male, age 55, unknown 101.9
2643 Male, age 74, both hemispheres 100.6
2185 Male, age 76, both hemispheres 98.7
2133 Female, age 91, both hemispheres 94.8
Gigantocellular reticular nuclei, medullary
nTPM: 102.5
2314 Male, age 61, both hemispheres 120.6
1876 Female, age 85, both hemispheres 117.5
2387 Female, age 91, both hemispheres 108.3
2022 Male, age 76, right hemisphere 97.5
2310 Male, age 80, both hemispheres 87.3
2462 Male, age 74, both hemispheres 83.8
Gigantocellular reticular nuclei, pars
nTPM: 86.6
2084 Female, age 85, both hemispheres 103.9
2336 Male, age 61, both hemispheres 89.5
2706 Male, age 80, both hemispheres 88.2
2330 Male, age 80, both hemispheres 83.2
2168 Male, age 76, both hemispheres 68.3
Inferior olive
nTPM: 112.9
2178 Male, age 61, both hemispheres 125.3
2379 Male, age 80, both hemispheres 120.1
2563 Male, age 74, both hemispheres 116.4
2085 Female, age 85, both hemispheres 114.4
2628 Female, age 91, both hemispheres 88.1
Lateral medullary reticular nucleus
nTPM: 112.4
2305 Male, age 74, both hemispheres 118.3
2852 Male, age 80, both hemispheres 117.7
2374 Male, age 61, both hemispheres 116.2
2190 Female, age 85, both hemispheres 112.1
2804 Female, age 91, both hemispheres 108.7
2044 Male, age 76, both hemispheres 101.6
Medial olivary nucleus
nTPM: 135.5
1943 Male, age 61, both hemispheres 165.0
1962 Male, age 76, both hemispheres 141.4
2138 Female, age 91, both hemispheres 129.7
2851 Male, age 80, both hemispheres 105.9
Medial vestibular nucleus
nTPM: 98.4
2803 Female, age 91, both hemispheres 112.3
2743 Female, age 85, both hemispheres 107.7
2093 Male, age 80, both hemispheres 99.8
2801 Male, age 74, both hemispheres 99.1
2134 Male, age 76, both hemispheres 86.7
2624 Male, age 61, both hemispheres 84.6
Motor hypoglossal nucleus
nTPM: 99.4
2125 Female, age 91, both hemispheres 109.8
2132 Female, age 85, both hemispheres 103.5
2277 Male, age 76, both hemispheres 101.8
2182 Male, age 80, both hemispheres 92.5
2461 Male, age 61, both hemispheres 89.3
Nucleus ambiguus
nTPM: 106.8
2071 Male, age 76, both hemispheres 141.7
2096 Female, age 85, both hemispheres 71.9
Nucleus cuneatus
nTPM: 104.8
2808 Female, age 85, both hemispheres 130.8
2380 Male, age 80, both hemispheres 128.8
2376 Male, age 61, both hemispheres 117.3
2381 Male, age 80, both hemispheres 111.7
2564 Male, age 74, both hemispheres 110.2
2562 Male, age 61, both hemispheres 96.0
2805 Female, age 91, both hemispheres 89.5
2100 Male, age 76, both hemispheres 86.2
2131 Male, age 76, both hemispheres 73.1
Nucleus gracilis
nTPM: 113.9
2382 Male, age 80, both hemispheres 123.3
2299 Female, age 85, both hemispheres 117.3
2627 Male, age 74, both hemispheres 101.1
Nucleus raphe obscurus
nTPM: 129.6
2142 Male, age 76, midline 137.7
2800 Male, age 61, midline 125.6
2845 Female, age 85, midline 125.5
Nucleus raphe pallidus
nTPM: 122.6
1924 Male, age 61, midline 139.9
2145 Male, age 76, midline 129.6
2183 Male, age 80, midline 98.2
Nucleus tractus solitarii
nTPM: 111.8
2144 Female, age 91, right hemisphere 140.2
2191 Female, age 85, both hemispheres 117.5
2656 Male, age 76, both hemispheres 105.1
2307 Male, age 80, both hemispheres 84.5
Parvicellular reticular nuclei
nTPM: 95.8
2119 Male, age 80, both hemispheres 106.7
2095 Male, age 76, both hemispheres 104.3
2558 Male, age 74, both hemispheres 76.5
Parvicellular reticular nuclei, medullary
nTPM: 90.3
2189 Female, age 91, both hemispheres 91.5
2091 Female, age 85, both hemispheres 91.3
2181 Male, age 80, left hemisphere 88.0
Peritrigeminal nucleus
nTPM: 110.1
2067 Female, age 85, both hemispheres 114.0
2136 Male, age 76, both hemispheres 112.4
2179 Male, age 61, both hemispheres 104.0
Prepositus hypoglossal nucleus
nTPM: 112.4
2855 Female, age 85, right hemisphere 120.4
2086 Male, age 80, both hemispheres 104.5
Spinal trigeminal nucleus, caudal
nTPM: 97.4
2312 Male, age 61, both hemispheres 114.4
2308 Male, age 80, both hemispheres 98.8
2642 Male, age 74, both hemispheres 94.3
2447 Male, age 76, both hemispheres 93.2
2390 Female, age 91, both hemispheres 86.2
Spinal trigeminal nucleus, interpolar
nTPM: 96.9
2386 Female, age 85, both hemispheres 115.0
2033 Male, age 80, both hemispheres 113.9
2389 Female, age 91, both hemispheres 91.7
2066 Male, age 76, right hemisphere 89.8
2625 Male, age 61, both hemispheres 74.3
Spinal vestibular nucleus
nTPM: 109.2
2384 Male, age 74, both hemispheres 121.6
2806 Female, age 85, both hemispheres 118.0
2748 Male, age 76, both hemispheres 113.7
2780 Male, age 80, both hemispheres 107.2
2186 Female, age 91, both hemispheres 99.9
2796 Male, age 61, both hemispheres 94.8
Superior vestibular nucleus
nTPM: 123.4
2383 Male, age 74, both hemispheres 141.1
2015 Male, age 80, both hemispheres 115.6
2061 Male, age 76, both hemispheres 113.4
Ventral medullary reticular nucleus
nTPM: 116.3
2372 Male, age 61, both hemispheres 127.1
2060 Male, age 76, both hemispheres 105.5
Ventrolateral medulla, A1-C1 cell groups
nTPM: 108.5
2118 Male, age 80, both hemispheres 118.0
2180 Male, age 61, both hemispheres 114.6
2741 Female, age 85, both hemispheres 107.1
1986 Male, age 76, both hemispheres 105.6
2302 Female, age 91, both hemispheres 97.1

MEDULLA OBLONGATA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

40.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Medulla oblongata
Scaled Tags Per Million: 40.0
FF:10155-103A2 76 years, female 43.8
FF:10174-103C3 60 years, female 42.3
FF:10038-101F2 18-64 years, mixed 33.9

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