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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
118.0
nTPM
FANTOM5:
33.7
Scaled Tags Per Million
PONS - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
118.0
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 102.5
2090
Male, age 80, both hemispheres
118.3
2188
Female, age 91, both hemispheres
110.1
2301
Female, age 85, both hemispheres
96.0
1984
Male, age 76, both hemispheres
85.6
Dorsal cochlear nucleus nTPM: 109.2
2378
Male, age 80, both hemispheres
116.3
2802
Male, age 74, right hemisphere
111.3
2187
Female, age 91, both hemispheres
107.7
2058
Male, age 76, both hemispheres
106.1
2370
Male, age 61, both hemispheres
104.8
Dorsal tegmental nucleus nTPM: 108.9
2358
Male, age 61, both hemispheres
112.9
1936
Male, age 76, left hemisphere
108.5
2326
Male, age 74, both hemispheres
107.8
2083
Male, age 80, both hemispheres
106.6
Dorsolateral tegmental area nTPM: 114.7
2337
Male, age 61, both hemispheres
126.1
2751
Female, age 85, both hemispheres
120.5
2654
Male, age 80, both hemispheres
114.2
2360
Male, age 74, both hemispheres
110.6
2141
Male, age 76, both hemispheres
102.0
Kolliker-Fuse nucleus nTPM: 105.6
2315
Male, age 76, right hemisphere
129.8
2793
Female, age 91, left hemisphere
97.3
2163
Male, age 80, both hemispheres
89.7
Lateral lemniscal nuclei nTPM: 84.1
2036
Male, age 80, both hemispheres
93.9
2320
Female, age 91, left hemisphere
90.1
2746
Female, age 85, left hemisphere
84.9
2453
Male, age 74, right hemisphere
79.3
2169
Male, age 76, both hemispheres
72.4
Lateral parabrachial nucleus nTPM: 108.7
2792
Male, age 76, both hemispheres
135.1
2013
Male, age 80, both hemispheres
105.0
2790
Male, age 61, both hemispheres
103.8
2139
Female, age 85, right hemisphere
90.9
Lateral vestibular nucleus nTPM: 93.9
2311
Male, age 80, both hemispheres
107.4
2184
Male, age 76, both hemispheres
80.3
Locus coeruleus nTPM: 94.2
2788
Male, age 74, unknown
101.2
2014
Male, age 55, unknown
100.7
2162
Male, age 80, both hemispheres
99.0
2317
Female, age 72, unknown
93.8
2720
Male, age 74, both hemispheres
91.0
2123
Female, age 91, both hemispheres
88.6
1980
Male, age 76, both hemispheres
85.3
Medial parabrachial nucleus nTPM: 101.1
2170
Female, age 91, both hemispheres
110.5
2463
Female, age 85, right hemisphere
107.6
2786
Male, age 76, both hemispheres
101.2
2854
Male, age 80, both hemispheres
100.9
2156
Male, age 61, both hemispheres
85.5
Medial periolivary nuclei nTPM: 87.9
2791
Male, age 74, right hemisphere
106.2
2081
Male, age 80, both hemispheres
99.6
2063
Male, age 76, both hemispheres
84.7
2458
Female, age 91, both hemispheres
83.6
2171
Female, age 85, both hemispheres
65.3
Motor facial nucleus nTPM: 89.2
2126
Male, age 61, both hemispheres
113.6
2365
Male, age 74, right hemisphere
95.9
2697
Female, age 85, both hemispheres
86.4
2795
Female, age 91, both hemispheres
85.8
2062
Male, age 76, both hemispheres
78.8
2327
Male, age 80, both hemispheres
74.8
Motor trigeminal nucleus nTPM: 93.1
2309
Male, age 76, both hemispheres
102.3
2335
Male, age 61, both hemispheres
98.6
2560
Male, age 74, both hemispheres
88.7
2079
Male, age 80, both hemispheres
88.3
2321
Female, age 91, both hemispheres
87.8
Nuclei of the trapezoid body nTPM: 82.9
1983
Male, age 76, both hemispheres
91.2
2166
Male, age 80, both hemispheres
87.6
2368
Female, age 91, both hemispheres
84.9
2159
Male, age 61, both hemispheres
78.0
2735
Female, age 85, both hemispheres
72.6
Nucleus raphe magnus nTPM: 79.4
2051
Male, age 76, both hemispheres
93.3
2459
Female, age 91, both hemispheres
89.8
2455
Male, age 74, both hemispheres
85.2
2328
Male, age 80, both hemispheres
79.7
2160
Male, age 61, both hemispheres
66.2
2172
Female, age 85, both hemispheres
62.4
Paramedian reticular nucleus nTPM: 103.2
2052
Male, age 76, both hemispheres
122.4
2057
Male, age 80, both hemispheres
102.4
2313
Male, age 61, both hemispheres
94.4
2050
Female, age 85, both hemispheres
93.5
Pedunculopontine tegmental nucleus nTPM: 112.9
2338
Male, age 61, both hemispheres
128.3
2334
Male, age 80, both hemispheres
105.9
1921
Female, age 85, both hemispheres
104.6
Pontine nuclei nTPM: 89.6
2454
Male, age 74, left hemisphere
111.1
2319
Female, age 91, both hemispheres
110.8
2109
Female, age 72, unknown
91.0
2115
Male, age 80, left hemisphere
87.0
1968
Male, age 76, left hemisphere
84.2
1863
Male, age 55, unknown
81.4
2727
Male, age 61, right hemisphere
78.4
2787
Female, age 85, both hemispheres
73.1
Pontine raphe nucleus nTPM: 97.3
2853
Male, age 76, midline
106.7
2122
Female, age 85, midline
88.0
Posteroventral cochlear nucleus nTPM: 118.0
2135
Female, age 91, both hemispheres
137.0
2341
Male, age 80, both hemispheres
129.2
2371
Male, age 61, both hemispheres
118.5
2070
Male, age 76, both hemispheres
105.1
2752
Female, age 85, both hemispheres
100.1
Principal sensory trigeminal nucleus nTPM: 87.4
2367
Female, age 91, left hemisphere
102.9
2324
Male, age 76, both hemispheres
87.6
2008
Male, age 80, left hemisphere
85.8
2158
Male, age 61, both hemispheres
73.5
Reticular pontine nucleus, caudal nTPM: 91.9
2559
Male, age 74, both hemispheres
107.4
2092
Male, age 76, both hemispheres
94.5
2457
Female, age 91, both hemispheres
94.3
2332
Male, age 80, right hemisphere
71.5
Reticular pontine nucleus, oral nTPM: 103.9
1939
Male, age 80, both hemispheres
113.8
2366
Female, age 91, both hemispheres
105.6
2167
Male, age 76, both hemispheres
105.2
2361
Male, age 74, both hemispheres
102.2
2012
Female, age 85, both hemispheres
92.4
Reticulotegmental nucleus nTPM: 91.3
2333
Male, age 80, both hemispheres
96.4
2452
Male, age 74, both hemispheres
90.3
2325
Male, age 76, both hemispheres
89.8
2322
Female, age 91, both hemispheres
88.6
Spinal trigeminal nucleus, oral nTPM: 90.3
1978
Male, age 76, both hemispheres
96.8
2737
Female, age 85, both hemispheres
89.0
2164
Male, age 80, both hemispheres
85.0
Subcoeruleus area nTPM: 100.5
2369
Female, age 85, left hemisphere
125.0
2451
Male, age 74, both hemispheres
105.6
1958
Male, age 80, both hemispheres
101.6
2323
Female, age 91, left hemisphere
89.4
2089
Male, age 76, left hemisphere
80.9
Superior olive nTPM: 88.1
2364
Male, age 74, right hemisphere
101.5
2020
Male, age 76, both hemispheres
98.2
1875
Female, age 85, both hemispheres
82.9
2561
Female, age 91, both hemispheres
82.0
2329
Male, age 80, right hemisphere
75.8
Ventral periolivary nuclei nTPM: 83.4
2023
Male, age 76, both hemispheres
108.3
2794
Female, age 91, left hemisphere
83.5
2165
Male, age 80, both hemispheres
76.9
2130
Female, age 85, both hemispheres
65.0
Ventrolateral tegmental area, A5 NE cell group nTPM: 94.1
2359
Male, age 61, both hemispheres
126.4
2456
Female, age 91, both hemispheres
93.6
2840
Female, age 85, both hemispheres
91.3
1959
Male, age 76, both hemispheres
86.0
2449
Male, age 74, both hemispheres
83.8
2161
Male, age 80, both hemispheres
83.4
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
The Human Protein Atlas project is funded
