We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
MT-ND3
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE & INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCT & INT

  • MT-ND3
BRAIN CEREBELLUM Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Cerebellum
CEREBELLUM - Expression summary
Protein expression
Cerebellumi

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Cells in granular layer: Not detected
Cells in molecular layer: Not detected
Purkinje cells: High
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:21953.5 nTPM
HPA Brain:23402.5 nTPM
GTEx:21953.5 nTPM
Pig:10304.5 nTPM
Mouse:3801.8 nTPM
Allen mouse:0.1 Expression energy

CEREBELLUM - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA063296
Purkinje cells High
Cells in granular layer Not detected
Cells in molecular layer Not detected



CEREBELLUM - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

23402.5
Sample id Sample description nTPM
Cerebellar cortex
nTPM: 18423.9
1769 Male, age 76, right hemisphere 53690.9
1774 Male, age 80, left hemisphere 27318.1
1768 Female, age 72, unknown 19223.8
2055 Female, age 91, right hemisphere 17008.4
2003 Female, age 85, right hemisphere 15322.9
2006 Male, age 61, right hemisphere 5995.9
1788 Male, age 55, unknown 4968.8
2101 Male, age 74, right hemisphere 3862.5
Cerebellar nuclei
nTPM: 16382.1
2882 Male, age 76, left hemisphere 38059.4
2177 Female, age 85, both hemispheres 29765.3
2175 Male, age 61, right hemisphere 16278.7
2005 Male, age 80, left hemisphere 15013.4
1871 Male, age 74, unknown 13470.5
1879 Male, age 55, unknown 11166.4
1966 Female, age 91, left hemisphere 8377.0
2783 Female, age 72, unknown 7786.1
2318 Male, age 74, left hemisphere 7521.6
Flocculonodular lobe
nTPM: 23402.5
1767 Male, age 76, left hemisphere 51223.1
1765 Male, age 55, unknown 37488.3
1771 Male, age 80, left hemisphere 33375.2
2176 Female, age 91, right hemisphere 18562.6
1792 Male, age 74, unknown 9707.8
1835 Female, age 85, right hemisphere 9593.6
2004 Male, age 61, right hemisphere 3866.7
Vermis
nTPM: 23333.0
1770 Male, age 76, left hemisphere 63727.7
1766 Male, age 55, unknown 39162.2
1778 Female, age 91, left hemisphere 38958.0
2834 Male, age 80, left hemisphere 19529.6
1751 Male, age 74, right hemisphere 15075.0
1825 Male, age 74, unknown 12374.1
1988 Female, age 85, left hemisphere 8504.8
2460 Male, age 61, both hemispheres 7513.6
1928 Female, age 72, unknown 5152.1

CEREBELLUM - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

21953.5
GTEx sample id Sample description nTPM
Brain - Cerebellar Hemisphere
Average nTPM: 21953.5
Samples: 215

Max nTPM: 118210.5
Min nTPM: 3033.0
Std nTPM: 20598.9
Median nTPM: 15042.8
GTEX-ZF28-0011-R11a-SM-4WWEI 60-69 years, male 118210.5
GTEX-1LKK1-0011-R11a-SM-EXOIG 50-59 years, female 117676.0
GTEX-1CAV2-0011-R11a-SM-ARU8D 40-49 years, female 115107.3
GTEX-131XW-0011-R11a-SM-5DUV9 50-59 years, female 108157.3
GTEX-139UW-0011-R11a-SM-5IJGN 60-69 years, male 104661.6
GTEX-16NPV-0011-R11a-SM-7IGMK 50-59 years, female 99568.0
GTEX-1IOXB-0011-R11a-SM-A9G1X 50-59 years, male 91445.2
GTEX-14C39-0011-R11b-SM-5YYAF 40-49 years, male 80531.6
GTEX-13CZV-0011-R11b-SM-5N9FN 60-69 years, male 80450.5
GTEX-1J8Q2-0011-R11a-SM-A9SKI 60-69 years, male 74178.9
GTEX-16Z82-0011-R11a-SM-79OKJ 60-69 years, male 70050.1
GTEX-13PLJ-0011-R11b-SM-5O9BS 60-69 years, female 68659.0
GTEX-1B8SG-0011-R11a-SM-7P8PF 50-59 years, male 68079.1
GTEX-1HUB1-0011-R11b-SM-CE6SC 60-69 years, male 60848.6
GTEX-OHPN-0011-R11A-SM-2I5FM 60-69 years, female 55590.0
GTEX-11EI6-0011-R11a-SM-DO11V 60-69 years, male 50212.0
GTEX-1GZHY-0011-R11a-SM-C1YRQ 50-59 years, female 49423.0
GTEX-ZE9C-0011-R11a-SM-4WKGG 60-69 years, male 48801.5
GTEX-16XZZ-0011-R11a-SM-7EPI3 60-69 years, male 45689.8
GTEX-13NZA-0011-R11b-SM-5KM4W 60-69 years, male 40499.5
GTEX-13PVQ-0011-R11a-SM-5O9DU 50-59 years, male 39112.1
GTEX-183WM-0011-R11a-SM-718A5 70-79 years, female 37896.6
GTEX-1C64N-0011-R11b-SM-7P8Q6 50-59 years, male 35577.4
GTEX-17EVQ-0011-R11a-SM-7LT9C 70-79 years, male 35390.3
GTEX-N7MT-0011-R11A-SM-2I3DZ 60-69 years, female 35171.5
GTEX-13QIC-0011-R11b-SM-5O9BU 60-69 years, female 34495.7
GTEX-145MI-0011-R11a-SM-5P9JZ 60-69 years, female 34481.6
GTEX-1H4P4-0011-R11b-SM-CE6S8 50-59 years, male 33614.5
GTEX-11WQC-0011-R11b-SM-57WD6 60-69 years, male 31600.4
GTEX-1M4P7-0011-R11b-SM-EXOIK 60-69 years, male 31137.2
GTEX-17JCI-0011-R11a-SM-7189Y 60-69 years, female 30823.1
GTEX-132Q8-0011-R11b-SM-5DUW9 60-69 years, male 30639.8
GTEX-11EMC-0011-R11b-SM-DNZZK 60-69 years, female 30428.0
GTEX-1IKOH-0011-R11a-SM-AHZ38 60-69 years, female 30023.6
GTEX-ZE7O-0011-R11a-SM-57WBC 50-59 years, female 29958.7
GTEX-1BAJH-0011-R11b-SM-7IGLM 70-79 years, male 29812.4
GTEX-1JMOU-0011-R11b-SM-EXUTA 60-69 years, female 28939.7
GTEX-1GMRU-0011-R11b-SM-C1YQ4 50-59 years, male 28821.3
GTEX-12WSD-0011-R11a-SM-9OSVC 60-69 years, female 28795.1
GTEX-14BIN-0011-R11a-SM-5SI79 50-59 years, female 28555.4
GTEX-14E7W-0011-R11a-SM-5ZZVA 70-79 years, male 28109.6
GTEX-1F75W-0011-R11b-SM-AHZ34 60-69 years, male 27992.1
GTEX-1JJ6O-0011-R11b-SM-EXUS2 60-69 years, male 26885.5
GTEX-1IGQW-0011-R11a-SM-C1YRV 60-69 years, male 26823.2
GTEX-1R9K4-0011-R11a-SM-EZ6N9 60-69 years, male 26567.8
GTEX-ZVT3-0011-R11b-SM-57WBI 60-69 years, female 26225.0
GTEX-16GPK-0011-R11b-SM-7MKFF 60-69 years, male 25922.1
GTEX-18A6Q-0011-R11a-SM-72D6H 60-69 years, male 25758.6
GTEX-NL4W-0011-R11A-SM-2I3DW 50-59 years, male 24841.3
GTEX-1JJEA-0011-R11a-SM-EXUTE 60-69 years, male 24813.6
GTEX-13X6J-0011-R11a-SM-5P9HE 50-59 years, male 24806.1
GTEX-1I19N-0011-R11b-SM-ARU6Y 70-79 years, male 24415.4
GTEX-1H1DG-0011-R11a-SM-C1YQK 70-79 years, male 24117.0
GTEX-12WSH-0011-R11a-SM-5LZVM 50-59 years, male 24081.5
GTEX-12WSF-0011-R11a-SM-5LZVT 70-79 years, male 24034.1
GTEX-12WSC-0011-R11a-SM-5GU5J 50-59 years, male 22632.7
GTEX-13OW8-0011-R11a-SM-5L3GT 60-69 years, male 22056.0
GTEX-13FLV-0011-R11a-SM-5LZZ7 50-59 years, male 21955.9
GTEX-13FTY-0011-R11a-SM-5IJEA 40-49 years, female 21360.8
GTEX-14E6D-0011-R11b-SM-664NP 50-59 years, male 21124.2
GTEX-11ZTS-0011-R11a-SM-DO113 60-69 years, female 21003.5
GTEX-1LVAO-0011-R11b-SM-EXOI8 60-69 years, male 20982.3
GTEX-UTHO-0011-R11A-SM-3GIJE 60-69 years, male 20703.4
GTEX-1J8EW-0011-R11a-SM-AHZ37 60-69 years, female 20498.9
GTEX-1GTWX-0011-R11b-SM-C1YQJ 60-69 years, male 20470.8
GTEX-WHSE-0011-R11A-SM-3P5YY 20-29 years, male 20314.3
GTEX-13FHP-0011-R11b-SM-5LZXP 50-59 years, male 20225.3
GTEX-XMD1-0011-R11A-SM-4AT5J 60-69 years, male 20127.4
GTEX-1313W-0011-R11a-SM-5DUXN 50-59 years, female 20127.2
GTEX-13X6I-0011-R11a-SM-5P9HN 60-69 years, male 19795.0
GTEX-1E1VI-0011-R11a-SM-9OSWI 50-59 years, male 19677.5
GTEX-ZUA1-0011-R11b-SM-51MTI 40-49 years, male 19151.2
GTEX-1I1HK-0011-R11a-SM-B2LVN 60-69 years, male 19073.8
GTEX-1HCU6-0011-R11b-SM-AHZ2F 60-69 years, female 18798.0
GTEX-13RTJ-0011-R11a-SM-5O9CK 60-69 years, male 18275.1
GTEX-T2IS-0011-R11A-SM-32QPC 20-29 years, female 18259.3
GTEX-14BIM-0011-R11b-SM-5S2RN 60-69 years, female 18220.4
GTEX-Y8DK-0011-R11A-SM-4SOK2 60-69 years, male 18161.5
GTEX-13SLW-0011-R11a-SM-5SI8Q 70-79 years, male 18133.2
GTEX-QMR6-0011-R11A-SM-32PKK 50-59 years, male 18089.5
GTEX-ZVZQ-0011-R11a-SM-51MS6 60-69 years, female 17902.8
GTEX-1EKGG-0011-R11a-SM-9QEHZ 60-69 years, male 17897.3
GTEX-1GMR8-0011-R11b-SM-9OSX2 50-59 years, female 17663.0
GTEX-1GF9W-0011-R11b-SM-9OSXG 60-69 years, male 17385.0
GTEX-1F75A-0011-R11a-SM-AHZ35 50-59 years, male 17378.7
GTEX-ZDXO-0011-R11a-SM-4WWD9 60-69 years, male 17371.8
GTEX-17EVP-0011-R11a-SM-7EWDL 40-49 years, male 17369.0
GTEX-13CF2-0011-R11b-SM-5LZXO 60-69 years, male 17231.6
GTEX-13JVG-0011-R11a-SM-5KM53 60-69 years, male 17176.4
GTEX-13JUV-0011-R11a-SM-5LZYH 40-49 years, female 17027.7
GTEX-15DCD-0011-R11a-SM-D4P1R 70-79 years, female 16810.9
GTEX-13OW7-0011-R11a-SM-5O9DY 50-59 years, male 16718.9
GTEX-14ASI-0011-R11b-SM-6AJBJ 60-69 years, male 16674.7
GTEX-YJ89-0011-R11a-SM-4SOKA 60-69 years, male 16358.5
GTEX-1IL2U-0011-R11a-SM-CE6SO 60-69 years, male 16286.6
GTEX-WL46-0011-R11A-SM-3MJFT 50-59 years, male 16253.4
GTEX-11DZ1-0011-R11b-SM-DO11W 50-59 years, male 16187.1
GTEX-RU72-0011-R11A-SM-CM2U1 50-59 years, female 16135.8
GTEX-1B933-0011-R11a-SM-7P8PM 50-59 years, female 16105.1
GTEX-1H3VE-0011-R11b-SM-C1YRP 40-49 years, male 16035.6
GTEX-1GZ4I-0011-R11b-SM-9OSWR 50-59 years, male 16001.3
GTEX-14PN4-0011-R11a-SM-686ZW 50-59 years, male 15631.3
GTEX-1H3O1-0011-R11a-SM-A96RV 60-69 years, male 15546.2
GTEX-1F7RK-0011-R11b-SM-9QEI2 20-29 years, female 15376.5
GTEX-12WSI-0011-R11b-SM-5P9EZ 50-59 years, male 15229.8
GTEX-1HBPI-0011-R11b-SM-CE6SH 50-59 years, male 15098.0
GTEX-1HGF4-0011-R11a-SM-C1YRR 60-69 years, male 15046.6
GTEX-NPJ7-0011-R11A-SM-2I3E8 60-69 years, female 15042.8
GTEX-1F52S-0011-R11a-SM-CJI23 60-69 years, female 15017.7
GTEX-Z93S-0011-R11a-SM-4RGNN 50-59 years, male 14975.4
GTEX-145MH-0011-R11a-SM-5P9HQ 50-59 years, male 14957.9
GTEX-TSE9-0011-R11A-SM-3DB7N 60-69 years, female 14859.0
GTEX-RVPV-0011-R11A-SM-2TF6F 60-69 years, male 14834.0
GTEX-13G51-0011-R11b-SM-5J2NE 60-69 years, male 14820.2
GTEX-144GL-0011-R11b-SM-5P9F6 50-59 years, male 14735.9
GTEX-13O3O-0011-R11b-SM-5KM4G 60-69 years, female 14696.4
GTEX-1R9PO-0011-R11b-SM-EZ6NB 60-69 years, female 14596.2
GTEX-WWYW-0011-R11A-SM-3NB38 50-59 years, female 14551.3
GTEX-13S7M-0011-R11b-SM-5P9HU 60-69 years, female 14457.8
GTEX-1N2DW-0011-R11b-SM-EXOIL 50-59 years, male 14368.2
GTEX-ZAB4-0011-R11a-SM-4SOKI 40-49 years, male 14314.4
GTEX-12ZZZ-0011-R11a-SM-5EGLC 60-69 years, male 14119.4
GTEX-15DYW-0011-R11a-SM-6LPIT 60-69 years, female 14113.3
GTEX-13NYS-0011-R11b-SM-5MR4P 60-69 years, male 14105.5
GTEX-1H3NZ-0011-R11b-SM-CE6SF 60-69 years, male 14090.0
GTEX-1399T-0011-R11a-SM-5J2O1 60-69 years, male 13977.7
GTEX-1HSKV-0011-R11b-SM-AHZ2E 60-69 years, male 13921.8
GTEX-1I1GV-0011-R11a-SM-CJI3Z 60-69 years, male 13880.8
GTEX-139TT-0011-R11b-SM-5LZV1 60-69 years, male 13680.5
GTEX-11TTK-0011-R11b-SM-DO112 60-69 years, female 13490.2
GTEX-1IY9M-0011-R11b-SM-A96TI 60-69 years, male 13379.6
GTEX-1F48J-0011-R11b-SM-9OSWV 50-59 years, female 13341.7
GTEX-X261-0011-R11A-SM-4E3JY 50-59 years, male 13336.6
GTEX-13OVL-0011-R11b-SM-5L3G7 50-59 years, male 13204.4
GTEX-13N2G-0011-R11a-SM-5MR3F 60-69 years, male 13198.1
GTEX-11ZUS-0011-R11b-SM-5BC7B 30-39 years, male 13169.8
GTEX-1CB4G-0011-R11a-SM-9OSWG 60-69 years, male 13068.7
GTEX-1J1OQ-0011-R11a-SM-A96S3 40-49 years, female 12843.6
GTEX-15G19-0011-R11b-SM-6LPIH 60-69 years, male 12786.6
GTEX-S7SE-0011-R11A-SM-2XCDD 50-59 years, male 12739.0
GTEX-WZTO-0011-R11A-SM-4E3K9 40-49 years, male 12518.0
GTEX-1A3MX-0011-R11b-SM-7DUGP 60-69 years, male 12399.4
GTEX-1LSVX-0011-R11b-SM-EXOIA 60-69 years, male 12397.4
GTEX-14DAQ-0011-R11a-SM-664NO 60-69 years, female 12285.8
GTEX-145LU-0011-R11b-SM-5P9JX 50-59 years, male 12271.2
GTEX-14ABY-0011-R11a-SM-5SI7C 50-59 years, male 12154.6
GTEX-17HII-0011-R11b-SM-7KFSX 50-59 years, male 12073.5
GTEX-13FHO-0011-R11b-SM-5LZYQ 60-69 years, male 12059.3
GTEX-1N2EE-0011-R11b-SM-EXOIJ 60-69 years, male 11995.9
GTEX-12126-0011-R11a-SM-5BC6X 20-29 years, male 11729.0
GTEX-17HG3-0011-R11b-SM-7KFT4 30-39 years, female 11706.3
GTEX-1I1GQ-0011-R11b-SM-CKZPA 50-59 years, male 11680.3
GTEX-13OVJ-0011-R11a-SM-5P9H8 50-59 years, female 11677.7
GTEX-15CHQ-0011-R11b-SM-686ZZ 60-69 years, male 11449.0
GTEX-13VXU-0011-R11b-SM-5O9DJ 50-59 years, male 11447.7
GTEX-P44G-0011-R11A-SM-2I3FD 30-39 years, male 11155.1
GTEX-N7MS-0011-R11A-SM-2HMJS 60-69 years, male 11103.6
GTEX-12WSM-0011-R11a-SM-5DUX8 60-69 years, male 11034.7
GTEX-11DXY-0011-R11a-SM-DNZZN 60-69 years, male 10995.2
GTEX-14C5O-0011-R11b-SM-6872H 60-69 years, male 10952.7
GTEX-1IL2V-0011-R11a-SM-ARU6T 70-79 years, male 10926.3
GTEX-P44H-0011-R11A-SM-2XCER 40-49 years, male 10920.0
GTEX-1F6I4-0011-R11b-SM-9OSWS 60-69 years, male 10874.0
GTEX-13NYB-0011-R11a-SM-5KM3Q 40-49 years, male 10803.8
GTEX-1B8SF-0011-R11a-SM-79OOP 60-69 years, male 10777.3
GTEX-11H98-0011-R11b-SM-5NQ6U 50-59 years, male 10664.7
GTEX-1KD4Q-0011-R11b-SM-EXOIE 40-49 years, male 10566.3
GTEX-1HB9E-0011-R11b-SM-ARU79 50-59 years, male 10477.1
GTEX-13OW5-0011-R11b-SM-5L3GG 60-69 years, male 10445.0
GTEX-QDT8-0011-R11A-SM-32PKD 30-39 years, female 10436.5
GTEX-NL3H-0011-R11A-SM-2I3E6 60-69 years, male 10426.5
GTEX-1H1CY-0011-R11a-SM-C1YQR 60-69 years, female 10421.6
GTEX-1AX9I-0011-R11b-SM-7DHN4 60-69 years, male 10385.4
GTEX-NPJ8-0011-R11A-SM-2YUMS 40-49 years, male 10351.3
GTEX-13O3Q-0011-R11b-SM-5KM2W 50-59 years, male 10347.0
GTEX-11GSP-0011-R11b-SM-5NQ7V 60-69 years, female 10342.4
GTEX-13FXS-0011-R11a-SM-5L3DM 50-59 years, male 10265.0
GTEX-13X6K-0011-R11a-SM-5P9F5 60-69 years, female 10253.4
GTEX-1LG7Y-0011-R11a-SM-EXOIH 50-59 years, male 10129.6
GTEX-YFC4-0011-R11a-SM-4SOK6 40-49 years, female 9976.6
GTEX-11PRG-0011-R11b-SM-DNZZY 50-59 years, male 9939.8
GTEX-T5JC-0011-R11A-SM-32PMB 20-29 years, male 9882.6
GTEX-17F97-0011-R11b-SM-7KFRQ 50-59 years, male 9877.1
GTEX-1I1GR-0011-R11a-SM-CM2T5 60-69 years, male 9846.5
GTEX-1GN73-0011-R11b-SM-9OSX4 60-69 years, male 9829.8
GTEX-1B8L1-0011-R11b-SM-793DJ 60-69 years, male 9708.1
GTEX-1IKK5-0011-R11a-SM-C1YRX 60-69 years, male 9706.8
GTEX-11OF3-0011-R11a-SM-57WCR 60-69 years, male 9617.2
GTEX-13OVH-0011-R11b-SM-5KM4X 70-79 years, male 9496.4
GTEX-1ICLZ-0011-R11a-SM-CJI3N 60-69 years, male 9352.5
GTEX-1IDJH-0011-R11b-SM-C1YRT 70-79 years, male 9342.5
GTEX-X4XX-0011-R11A-SM-46MWQ 60-69 years, male 9315.2
GTEX-1JMQJ-0011-R11a-SM-EXOJY 50-59 years, male 9240.7
GTEX-1EMGI-0011-R11b-SM-9OSWX 60-69 years, male 8999.6
GTEX-R55E-0011-R11A-SM-2TC6I 20-29 years, male 8883.7
GTEX-1H1ZS-0011-R11a-SM-C1YQM 70-79 years, male 8813.0
GTEX-T6MN-0011-R11A-SM-32QOX 50-59 years, male 8542.9
GTEX-1I1GS-0011-R11a-SM-C1YRU 60-69 years, male 8334.2
GTEX-12ZZX-0011-R11a-SM-5DUVJ 40-49 years, female 7907.4
GTEX-WVLH-0011-R11A-SM-3MJFO 50-59 years, male 7844.7
GTEX-131YS-0011-R11b-SM-5EGLM 60-69 years, female 7728.6
GTEX-15ER7-0011-R11a-SM-6LPIL 20-29 years, female 7690.4
GTEX-11DYG-0011-R11a-SM-DNZZP 60-69 years, male 7642.2
GTEX-13SLX-0011-R11b-SM-5O9C8 50-59 years, female 7592.9
GTEX-16YQH-0011-R11b-SM-7LT98 30-39 years, male 7560.0
GTEX-Q2AG-0011-R11A-SM-2HMKZ 40-49 years, female 7494.3
GTEX-18465-0011-R11a-SM-72D78 50-59 years, male 7443.3
GTEX-18464-0011-R11a-SM-72D76 50-59 years, male 7385.8
GTEX-13OW6-0011-R11a-SM-5L3H2 50-59 years, male 7171.2
GTEX-12WSE-0011-R11b-SM-5P9JW 20-29 years, male 7167.9
GTEX-15EO6-0011-R11b-SM-6M47M 50-59 years, male 6962.3
GTEX-1HFI6-0011-R11b-SM-A96RU 40-49 years, male 6890.9
GTEX-X4EP-0011-R11B-SM-4QASK 60-69 years, female 6480.5
GTEX-131XH-0011-R11a-SM-5EGLN 50-59 years, male 6101.7
GTEX-X585-0011-R11B-SM-46MUZ 50-59 years, male 3033.0
Show allShow less
Brain - Cerebellum
Average nTPM: 19195.4
Samples: 241

Max nTPM: 92039.1
Min nTPM: 6564.9
Std nTPM: 11812.1
Median nTPM: 15452.3
GTEX-1RNSC-3126-SM-EVR4V 60-69 years, male 92039.1
GTEX-1E2YA-2926-SM-7MGWX 50-59 years, male 69335.2
GTEX-16Z82-2926-SM-6LPJJ 60-69 years, male 67637.3
GTEX-14PJO-2926-SM-686ZI 60-69 years, male 62631.9
GTEX-1KANB-3226-SM-D4P3G 50-59 years, male 58476.8
GTEX-1EH9U-3126-SM-7MXU5 60-69 years, male 55553.9
GTEX-1EWIQ-3026-SM-7IGOJ 70-79 years, female 53634.9
GTEX-1B8SG-1926-SM-73KUB 50-59 years, male 52233.8
GTEX-1JJE9-3026-SM-CNNPA 70-79 years, male 51723.7
GTEX-ZF28-2926-SM-4WKG1 60-69 years, male 51324.5
GTEX-1269C-3126-SM-5EGI6 60-69 years, female 50120.9
GTEX-1BAJH-3126-SM-7MGXY 70-79 years, male 45450.3
GTEX-1QEPI-3026-SM-EXOIW 60-69 years, female 45062.4
GTEX-1E1VI-2926-SM-7IGLT 50-59 years, male 44800.6
GTEX-14A5I-2826-SM-5SIBF 50-59 years, female 44591.4
GTEX-16XZZ-2926-SM-6LPK4 60-69 years, male 41495.0
GTEX-11EI6-2926-SM-5985U 60-69 years, male 38956.5
GTEX-OHPN-2626-SM-2I5H1 60-69 years, female 38650.5
GTEX-13PVQ-2926-SM-5L3HJ 50-59 years, male 38135.5
GTEX-14E6D-2926-SM-664OP 50-59 years, male 37193.0
GTEX-1HSMO-2926-SM-C1YR5 60-69 years, male 35401.9
GTEX-183WM-2726-SM-7KFRF 70-79 years, female 34576.3
GTEX-1RQEC-3026-SM-DPRXM 60-69 years, male 32946.6
GTEX-ZZPT-2926-SM-5EQ5S 50-59 years, male 32546.4
GTEX-11ZVC-3026-SM-59HJM 50-59 years, female 32487.8
GTEX-145MG-3126-SM-5Q5D3 50-59 years, male 31730.7
GTEX-1GTWX-2926-SM-7MXV4 60-69 years, male 31121.7
GTEX-1A8G7-3026-SM-73KTT 60-69 years, male 29604.2
GTEX-1GF9V-3026-SM-7P8R8 60-69 years, male 29266.3
GTEX-14JFF-2826-SM-6871Q 60-69 years, male 29069.0
GTEX-18A6Q-2826-SM-7LTAO 60-69 years, male 28524.0
GTEX-1HB9E-3126-SM-AHZ4M 50-59 years, male 28302.2
GTEX-11ZTS-3226-SM-5EGID 60-69 years, female 27754.5
GTEX-Y111-2826-SM-4TT3O 50-59 years, male 27417.4
GTEX-1H3VE-2826-SM-9WPOL 40-49 years, male 26508.4
GTEX-1IKOH-2826-SM-CNNRC 60-69 years, female 26329.7
GTEX-17JCI-3026-SM-7EWDR 60-69 years, female 25878.7
GTEX-NPJ7-2826-SM-2I3FU 60-69 years, female 25794.2
GTEX-P44G-2526-SM-2I5EK 30-39 years, male 25755.4
GTEX-PWO3-1026-SM-2I5F2 60-69 years, female 24834.8
GTEX-1H1DG-2826-SM-9JGHB 70-79 years, male 24606.7
GTEX-ZVT3-2926-SM-5GU6M 60-69 years, female 24382.5
GTEX-1128S-2826-SM-5N9DI 60-69 years, female 24201.3
GTEX-13CF2-3026-SM-5IFFX 60-69 years, male 23958.1
GTEX-1F6IF-3026-SM-7P8QN 60-69 years, male 23801.2
GTEX-1GZHY-3026-SM-7MXVA 50-59 years, female 23682.2
GTEX-139TS-3126-SM-5LZWX 60-69 years, male 23126.3
GTEX-13RTJ-3126-SM-5S2Q4 60-69 years, male 22987.6
GTEX-1JJ6O-3026-SM-C1YQH 60-69 years, male 22396.4
GTEX-ZYFD-2926-SM-5GID9 50-59 years, male 22213.7
GTEX-1KD4Q-3026-SM-EV7A7 40-49 years, male 22137.8
GTEX-1C6WA-3326-SM-7MKGN 60-69 years, male 22033.3
GTEX-11TTK-2826-SM-5GU5K 60-69 years, female 21587.2
GTEX-1C6VR-3026-SM-7IGLW 60-69 years, male 21523.1
GTEX-13N2G-3126-SM-5IJGL 60-69 years, male 21138.9
GTEX-1F52S-3026-SM-7P8PV 60-69 years, female 21054.0
GTEX-13FHP-2926-SM-5IJG9 50-59 years, male 20719.8
GTEX-1399T-3126-SM-5IJFS 60-69 years, male 20492.6
GTEX-13OW8-2926-SM-5L3FV 60-69 years, male 20445.8
GTEX-1F75W-3126-SM-7P8SJ 60-69 years, male 20394.3
GTEX-Y8DK-0726-SM-4TT3S 60-69 years, male 20270.3
GTEX-1H4P4-2726-SM-9JGGB 50-59 years, male 20213.5
GTEX-14BIN-3326-SM-5Q5E6 50-59 years, female 20205.2
GTEX-QMR6-1326-SM-32PLB 50-59 years, male 20156.0
GTEX-14JG1-2926-SM-686ZK 40-49 years, male 19752.4
GTEX-13OW7-2926-SM-5MR3Z 50-59 years, male 19510.0
GTEX-1B8L1-3226-SM-7P8OX 60-69 years, male 19466.8
GTEX-1H3O1-1826-SM-A96TO 60-69 years, male 19285.1
GTEX-T2IS-2926-SM-32QPO 20-29 years, female 19278.7
GTEX-1H3NZ-2926-SM-9WPQ8 60-69 years, male 19133.6
GTEX-15SHU-3026-SM-6LPIB 40-49 years, female 18876.5
GTEX-ZAK1-2926-SM-5HL9S 50-59 years, female 18783.4
GTEX-13OW5-3126-SM-5MR3Y 60-69 years, male 18724.2
GTEX-11ONC-3026-SM-5985W 60-69 years, male 18669.6
GTEX-1JMOU-2826-SM-EV79R 60-69 years, female 18459.0
GTEX-147GR-3126-SM-5S2PM 60-69 years, male 18375.3
GTEX-14C39-3026-SM-5S2QE 40-49 years, male 18350.0
GTEX-11EMC-3326-SM-5P9JH 60-69 years, female 18239.2
GTEX-ZDXO-2926-SM-4WKFM 60-69 years, male 18214.6
GTEX-1I1HK-2726-SM-AHZ2M 60-69 years, male 18061.6
GTEX-R55E-2526-SM-2TC6H 20-29 years, male 17976.5
GTEX-1RDX4-3226-SM-DPS14 50-59 years, female 17936.5
GTEX-12WSM-2126-SM-5GCOC 60-69 years, male 17880.6
GTEX-144GL-2926-SM-5O99F 50-59 years, male 17754.0
GTEX-132Q8-2926-SM-5IFFP 60-69 years, male 17697.4
GTEX-11DXY-3126-SM-5N9BT 60-69 years, male 17623.1
GTEX-PVOW-2626-SM-32PL8 40-49 years, male 17452.5
GTEX-1EKGG-3126-SM-9WPO5 60-69 years, male 17439.2
GTEX-11DXW-1026-SM-5H11K 40-49 years, male 17320.6
GTEX-17HG3-2826-SM-7EPGO 30-39 years, female 17310.1
GTEX-1H1CY-3026-SM-9OSW7 60-69 years, female 17244.9
GTEX-XMD1-2826-SM-4AT5F 60-69 years, male 17177.0
GTEX-N7MT-1226-SM-DKPOK 60-69 years, female 17161.2
GTEX-147F4-3026-SM-5Q5BJ 50-59 years, male 17095.4
GTEX-1HBPH-3026-SM-9WPNY 40-49 years, female 17054.8
GTEX-17HII-2926-SM-79OMK 50-59 years, male 17042.7
GTEX-13G51-3126-SM-5IJG7 60-69 years, male 17034.7
GTEX-13O3O-3026-SM-5KM42 60-69 years, female 16889.1
GTEX-14PN4-3026-SM-664O4 50-59 years, male 16876.5
GTEX-ZYY3-3026-SM-5GIEJ 60-69 years, female 16845.1
GTEX-111FC-3326-SM-5GZYV 60-69 years, male 16831.0
GTEX-1313W-3026-SM-5LZUZ 50-59 years, female 16725.6
GTEX-13112-2926-SM-5DUWT 50-59 years, male 16652.2
GTEX-145LU-2626-SM-5LU9Z 50-59 years, male 16601.1
GTEX-1JMQJ-3126-SM-EV79G 50-59 years, male 16578.4
GTEX-11OC5-0626-SM-5HL6M 60-69 years, male 16501.5
GTEX-12WSC-2926-SM-5BC5Z 50-59 years, male 16390.0
GTEX-WWYW-3026-SM-3NB36 50-59 years, female 16371.2
GTEX-WVLH-2926-SM-3MJG5 50-59 years, male 16336.1
GTEX-ZAB4-2926-SM-57WCV 40-49 years, male 16333.3
GTEX-11GSO-3026-SM-5Q5AL 60-69 years, male 16295.2
GTEX-15DYW-3026-SM-7KFRM 60-69 years, female 16072.9
GTEX-1I1GV-3026-SM-CNNR9 60-69 years, male 16053.5
GTEX-117XS-3126-SM-5GIDP 60-69 years, male 15943.3
GTEX-12ZZZ-3126-SM-5LZU6 60-69 years, male 15897.2
GTEX-13O3Q-3026-SM-5IJGD 50-59 years, male 15836.7
GTEX-1F48J-2726-SM-7P8PW 50-59 years, female 15783.3
GTEX-13S7M-3026-SM-5S2QQ 60-69 years, female 15650.9
GTEX-13VXU-3026-SM-5LU3K 50-59 years, male 15472.3
GTEX-1PIIG-2826-SM-DTX7O 30-39 years, male 15460.0
GTEX-1HBPI-2726-SM-9WPPF 50-59 years, male 15452.3
GTEX-1F75A-2926-SM-7MXVN 50-59 years, male 15451.0
GTEX-T6MN-2526-SM-32PMN 50-59 years, male 15408.4
GTEX-13OVJ-2726-SM-5IJG6 50-59 years, female 15399.9
GTEX-14ABY-3026-SM-664NE 50-59 years, male 15308.2
GTEX-11DZ1-2926-SM-5A5KI 50-59 years, male 15302.9
GTEX-11ZUS-2826-SM-5EQKW 30-39 years, male 15218.5
GTEX-1HSKV-2926-SM-B2LWJ 60-69 years, male 15120.3
GTEX-14BIM-3126-SM-5Q5C7 60-69 years, female 15079.1
GTEX-1JN1M-3126-SM-AHZ4E 60-69 years, female 15054.1
GTEX-YFC4-3026-SM-5IFJK 40-49 years, female 15026.2
GTEX-S7SE-2526-SM-2XCDL 50-59 years, male 15009.8
GTEX-1CB4H-3026-SM-79OLX 60-69 years, female 14957.2
GTEX-1C64N-3126-SM-79OO3 50-59 years, male 14749.3
GTEX-1JJEA-2926-SM-C1YSK 60-69 years, male 14742.7
GTEX-12ZZY-2926-SM-5DUXO 60-69 years, male 14725.4
GTEX-1EX96-3126-SM-9JGGC 50-59 years, male 14703.3
GTEX-QVUS-2926-SM-3GIJB 60-69 years, female 14693.0
GTEX-12WSD-3026-SM-5LZU7 60-69 years, female 14590.4
GTEX-13X6J-2926-SM-7EPGP 50-59 years, male 14509.1
GTEX-1CB4G-2926-SM-7MKFQ 60-69 years, male 14498.6
GTEX-1GN73-3026-SM-7MXV8 60-69 years, male 14489.0
GTEX-XLM4-2926-SM-4AT59 60-69 years, male 14477.2
GTEX-1KWVE-2226-SM-CXZKN 30-39 years, male 14463.0
GTEX-1GZ4I-2926-SM-9JGGO 50-59 years, male 14382.6
GTEX-145MH-2926-SM-5Q5D2 50-59 years, male 14334.7
GTEX-12WSH-3126-SM-5LZW8 50-59 years, male 14331.3
GTEX-13OVL-3026-SM-5IJF1 50-59 years, male 14326.0
GTEX-131YS-3026-SM-5EGHY 60-69 years, female 14251.9
GTEX-X261-3126-SM-4PQZC 50-59 years, male 14213.7
GTEX-14DAQ-3026-SM-5S2QZ 60-69 years, female 14146.3
GTEX-1IL2V-3026-SM-CYPSA 70-79 years, male 14032.9
GTEX-13OVH-2926-SM-5IJFH 70-79 years, male 14004.5
GTEX-1GF9W-2726-SM-9JGGW 60-69 years, male 14003.5
GTEX-WHSE-2926-SM-3NMBG 20-29 years, male 13974.0
GTEX-RNOR-2226-SM-2TF5O 50-59 years, female 13963.6
GTEX-17EVQ-2726-SM-7EWDT 70-79 years, male 13728.3
GTEX-15G19-2826-SM-6M48K 60-69 years, male 13710.2
GTEX-1A8G6-3126-SM-731D8 60-69 years, male 13703.1
GTEX-1HCVE-2926-SM-9WPPJ 50-59 years, male 13687.1
GTEX-1R46S-3126-SM-DPRZ9 60-69 years, female 13612.6
GTEX-Z93S-2826-SM-57WBL 50-59 years, male 13370.2
GTEX-1192X-3226-SM-5987D 50-59 years, male 13364.6
GTEX-13X6K-2826-SM-5O9DS 60-69 years, female 13283.1
GTEX-WZTO-2826-SM-3NM8P 40-49 years, male 13248.3
GTEX-14E7W-2926-SM-5S2R8 70-79 years, male 13241.7
GTEX-1MJK2-3026-SM-EV7A5 50-59 years, male 13218.8
GTEX-11DYG-2926-SM-5H132 60-69 years, male 13168.8
GTEX-NPJ8-2626-SM-2D7W2 40-49 years, male 13090.4
GTEX-1QP6S-3026-SM-EAZ4N 40-49 years, male 12939.0
GTEX-1IY9M-3126-SM-AHZ3A 60-69 years, male 12911.8
GTEX-1I1CD-2926-SM-A96SJ 60-69 years, female 12812.2
GTEX-1EMGI-3126-SM-7MXUR 60-69 years, male 12807.0
GTEX-ZUA1-2926-SM-59HL3 40-49 years, male 12764.3
GTEX-1JMQK-2926-SM-D4P2T 60-69 years, male 12758.5
GTEX-1H1ZS-2926-SM-9WPP2 70-79 years, male 12671.6
GTEX-YJ89-2926-SM-5P9IT 60-69 years, male 12669.5
GTEX-11NV4-2226-SM-5BC4T 60-69 years, male 12625.3
GTEX-12WSE-2926-SM-5RQJ9 20-29 years, male 12616.6
GTEX-13JUV-3026-SM-5K7WX 40-49 years, female 12616.5
GTEX-12126-0926-SM-5FQTW 20-29 years, male 12521.7
GTEX-TSE9-2926-SM-3DB77 60-69 years, female 12468.3
GTEX-13X6I-2926-SM-5Q5C3 60-69 years, male 12451.8
GTEX-1B8SF-3026-SM-731DX 60-69 years, male 12440.5
GTEX-Q2AG-2826-SM-2HMJQ 40-49 years, female 12428.7
GTEX-1F6I4-3026-SM-7P8SI 60-69 years, male 12247.3
GTEX-1JMLX-3026-SM-EV79Q 50-59 years, male 12241.6
GTEX-1LG7Y-3126-SM-EV7AS 50-59 years, male 12227.1
GTEX-139TT-2626-SM-5LZUB 60-69 years, male 12219.9
GTEX-1P4AB-3026-SM-EXOJS 50-59 years, male 12187.9
GTEX-14C5O-2926-SM-5RQI1 60-69 years, male 12104.4
GTEX-13FHO-2926-SM-5L3ES 60-69 years, male 12059.2
GTEX-14BMV-2926-SM-5TDEE 50-59 years, male 12040.5
GTEX-13QIC-3026-SM-5LU58 60-69 years, female 11869.7
GTEX-WL46-2826-SM-3LK81 50-59 years, male 11772.6
GTEX-18465-2926-SM-7KFSE 50-59 years, male 11721.1
GTEX-11PRG-2826-SM-5BC54 50-59 years, male 11700.7
GTEX-15ER7-3026-SM-6M47W 20-29 years, female 11681.0
GTEX-T5JC-2326-SM-32PMR 20-29 years, male 11614.3
GTEX-14JIY-2326-SM-6AJAJ 60-69 years, male 11584.8
GTEX-1PWST-3026-SM-EAZ3H 70-79 years, male 11445.3
GTEX-1LSVX-2826-SM-EVR58 60-69 years, male 11420.0
GTEX-11NUK-3026-SM-5986K 50-59 years, male 11408.6
GTEX-P44H-2426-SM-2XCEJ 40-49 years, male 11396.5
GTEX-1EU9M-2926-SM-793DF 60-69 years, male 11289.1
GTEX-17HHY-2926-SM-79OJW 50-59 years, male 11235.3
GTEX-13FXS-3026-SM-5LZYO 50-59 years, male 11121.7
GTEX-145MF-2826-SM-7EPGU 50-59 years, male 11067.0
GTEX-1R9PO-2826-SM-E6CPV 60-69 years, female 11062.1
GTEX-1J1OQ-3126-SM-D4P2O 40-49 years, female 11050.9
GTEX-13OW6-2926-SM-5KM29 50-59 years, male 10971.7
GTEX-14PJM-3026-SM-6LLHM 50-59 years, female 10836.3
GTEX-11GSP-3126-SM-5A5LL 60-69 years, female 10835.1
GTEX-RU72-2926-SM-2TF66 50-59 years, female 10825.2
GTEX-QDT8-3026-SM-32PKB 30-39 years, female 10676.5
GTEX-13SLX-3226-SM-5YYA6 50-59 years, female 10617.7
GTEX-145LS-3026-SM-5O99S 60-69 years, female 10574.2
GTEX-14ASI-2926-SM-5Q5DG 60-69 years, male 10559.2
GTEX-16YQH-2926-SM-6LPJE 30-39 years, male 10556.3
GTEX-X4XX-2926-SM-3NMB1 60-69 years, male 10512.4
GTEX-11O72-2826-SM-5HL6W 40-49 years, male 10338.3
GTEX-1NV8Z-3026-SM-DTX8Z 60-69 years, male 10303.4
GTEX-1GZ2Q-3026-SM-9JGG3 40-49 years, male 10285.0
GTEX-QVJO-1325-SM-2S1QX 60-69 years, female 10240.4
GTEX-17EVP-2926-SM-793BU 40-49 years, male 10152.9
GTEX-13NYB-3226-SM-5J2ND 40-49 years, male 10147.6
GTEX-12ZZX-2826-SM-5BC6K 40-49 years, female 10077.0
GTEX-1B933-3026-SM-731DB 50-59 years, female 10076.3
GTEX-1IDJH-3126-SM-C1YQS 70-79 years, male 10038.1
GTEX-UTHO-2926-SM-3P5Z9 60-69 years, male 10001.3
GTEX-1A3MX-2926-SM-718B7 60-69 years, male 10001.0
GTEX-ZAJG-3026-SM-5HL92 50-59 years, female 9932.2
GTEX-13JVG-3226-SM-5IJGJ 60-69 years, male 9931.3
GTEX-1B996-2926-SM-7MXUH 60-69 years, male 9905.3
GTEX-17F97-2926-SM-7DUEQ 50-59 years, male 9593.5
GTEX-1POEN-2726-SM-E9U6B 30-39 years, female 9437.2
GTEX-N7MS-2526-SM-2D7W3 60-69 years, male 9011.9
GTEX-1JMPZ-2826-SM-C1YRA 30-39 years, male 7735.8
GTEX-131XH-2926-SM-5LZU4 50-59 years, male 7032.4
GTEX-15EO6-2926-SM-6M48D 50-59 years, male 6825.2
GTEX-X4EP-3026-SM-3P5YP 60-69 years, female 6564.9
Show allShow less

CEREBELLUM - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

10304.5
Pig sample Sample description nTPM
Cerebellum
nTPM: 10304.5
Samples: 4

Max nTPM: 13344.8
Min nTPM: 8291.9
Sample A Female 13344.8
Sample B Female 8291.9
Sample C Male 10788.4
Sample D Male 8793.0

CEREBELLUM - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

3801.8
Mouse sample Sample description nTPM
Cerebellum
nTPM: 3801.8
Samples: 4

Max nTPM: 4570.3
Min nTPM: 3213.3
Sample A Male 4570.3
Sample B Male 3213.3
Sample C Female 4001.4
Sample D Female 3422.2

CEREBELLUM - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.1
Allen experiment id Experiment description Expression energy
Cerebellum
Expression energy: 0.1
73949734 Antisense, RP_051219_02_B05, Mouse strain C57BL/6J (56 days, male) 0.1

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org