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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
71725.6
nTPM
Pig:
41825.7
nTPM
Allen mouse:
22.2
Expression energy
PONS - Annotated protein expression
Pending normal tissue analysis
PONS - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
71725.6
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 48166.7
2301
Female, age 85, both hemispheres
97282.9
2188
Female, age 91, both hemispheres
37804.4
1984
Male, age 76, both hemispheres
33457.3
2090
Male, age 80, both hemispheres
24122.1
Dorsal cochlear nucleus nTPM: 54438.9
2378
Male, age 80, both hemispheres
90524.0
2802
Male, age 74, right hemisphere
66134.7
2187
Female, age 91, both hemispheres
39223.9
2058
Male, age 76, both hemispheres
38159.2
2370
Male, age 61, both hemispheres
38152.5
Dorsal tegmental nucleus nTPM: 45929.4
2358
Male, age 61, both hemispheres
82280.6
1936
Male, age 76, left hemisphere
37568.2
2083
Male, age 80, both hemispheres
33843.9
2326
Male, age 74, both hemispheres
30024.8
Dorsolateral tegmental area nTPM: 31154.1
2141
Male, age 76, both hemispheres
47877.6
2337
Male, age 61, both hemispheres
39270.3
2654
Male, age 80, both hemispheres
34064.0
2751
Female, age 85, both hemispheres
18852.7
2360
Male, age 74, both hemispheres
15705.7
Kolliker-Fuse nucleus nTPM: 45658.8
2793
Female, age 91, left hemisphere
81343.9
2163
Male, age 80, both hemispheres
41116.0
2315
Male, age 76, right hemisphere
14516.5
Lateral lemniscal nuclei nTPM: 39933.0
2320
Female, age 91, left hemisphere
64367.0
2453
Male, age 74, right hemisphere
49071.2
2169
Male, age 76, both hemispheres
48547.8
2036
Male, age 80, both hemispheres
25140.7
2746
Female, age 85, left hemisphere
12538.1
Lateral parabrachial nucleus nTPM: 28550.2
2790
Male, age 61, both hemispheres
39436.0
2792
Male, age 76, both hemispheres
36179.9
2139
Female, age 85, right hemisphere
21824.6
2013
Male, age 80, both hemispheres
16760.4
Lateral vestibular nucleus nTPM: 63383.6
2184
Male, age 76, both hemispheres
68572.7
2311
Male, age 80, both hemispheres
58194.5
Locus coeruleus nTPM: 39063.4
2720
Male, age 74, both hemispheres
77046.0
2162
Male, age 80, both hemispheres
52233.1
2788
Male, age 74, unknown
36259.3
2317
Female, age 72, unknown
32156.0
1980
Male, age 76, both hemispheres
28389.6
2014
Male, age 55, unknown
27876.0
2123
Female, age 91, both hemispheres
19483.9
Medial parabrachial nucleus nTPM: 36430.4
2854
Male, age 80, both hemispheres
60958.3
2786
Male, age 76, both hemispheres
46165.3
2156
Male, age 61, both hemispheres
39466.5
2170
Female, age 91, both hemispheres
26875.8
2463
Female, age 85, right hemisphere
8685.9
Medial periolivary nuclei nTPM: 36366.9
2458
Female, age 91, both hemispheres
73449.4
2171
Female, age 85, both hemispheres
44299.2
2063
Male, age 76, both hemispheres
24640.2
2791
Male, age 74, right hemisphere
19885.1
2081
Male, age 80, both hemispheres
19560.4
Motor facial nucleus nTPM: 65240.7
2795
Female, age 91, both hemispheres
130236.2
2697
Female, age 85, both hemispheres
95451.3
2327
Male, age 80, both hemispheres
89577.5
2365
Male, age 74, right hemisphere
27690.9
2062
Male, age 76, both hemispheres
25943.4
2126
Male, age 61, both hemispheres
22544.6
Motor trigeminal nucleus nTPM: 44505.3
2321
Female, age 91, both hemispheres
73312.7
2309
Male, age 76, both hemispheres
42391.7
2335
Male, age 61, both hemispheres
40148.9
2560
Male, age 74, both hemispheres
39888.6
2079
Male, age 80, both hemispheres
26784.7
Nuclei of the trapezoid body nTPM: 38067.6
2368
Female, age 91, both hemispheres
71002.3
2166
Male, age 80, both hemispheres
43066.9
1983
Male, age 76, both hemispheres
30374.7
2159
Male, age 61, both hemispheres
23651.7
2735
Female, age 85, both hemispheres
22242.5
Nucleus raphe magnus nTPM: 47279.1
2328
Male, age 80, both hemispheres
70160.5
2459
Female, age 91, both hemispheres
63505.1
2172
Female, age 85, both hemispheres
58750.2
2455
Male, age 74, both hemispheres
34203.8
2051
Male, age 76, both hemispheres
34132.4
2160
Male, age 61, both hemispheres
22922.7
Paramedian reticular nucleus nTPM: 30869.1
2313
Male, age 61, both hemispheres
41826.9
2050
Female, age 85, both hemispheres
34199.0
2052
Male, age 76, both hemispheres
30320.9
2057
Male, age 80, both hemispheres
17129.6
Pedunculopontine tegmental nucleus nTPM: 41105.8
2334
Male, age 80, both hemispheres
53289.4
2338
Male, age 61, both hemispheres
47805.4
1921
Female, age 85, both hemispheres
22222.6
Pontine nuclei nTPM: 24192.7
2319
Female, age 91, both hemispheres
45097.0
2787
Female, age 85, both hemispheres
34455.7
2115
Male, age 80, left hemisphere
25088.0
2454
Male, age 74, left hemisphere
23899.3
1863
Male, age 55, unknown
21817.6
1968
Male, age 76, left hemisphere
20682.5
2109
Female, age 72, unknown
13268.5
2727
Male, age 61, right hemisphere
9232.8
Pontine raphe nucleus nTPM: 37476.1
2853
Male, age 76, midline
48928.2
2122
Female, age 85, midline
26024.0
Posteroventral cochlear nucleus nTPM: 30481.8
2341
Male, age 80, both hemispheres
47241.0
2371
Male, age 61, both hemispheres
41211.5
2752
Female, age 85, both hemispheres
26228.0
2070
Male, age 76, both hemispheres
19157.0
2135
Female, age 91, both hemispheres
18571.2
Principal sensory trigeminal nucleus nTPM: 50697.0
2324
Male, age 76, both hemispheres
97802.9
2367
Female, age 91, left hemisphere
62938.0
2158
Male, age 61, both hemispheres
22648.2
2008
Male, age 80, left hemisphere
19398.7
Reticular pontine nucleus, caudal nTPM: 52011.0
2332
Male, age 80, right hemisphere
84605.2
2457
Female, age 91, both hemispheres
67763.4
2559
Male, age 74, both hemispheres
30237.3
2092
Male, age 76, both hemispheres
25437.9
Reticular pontine nucleus, oral nTPM: 37161.1
2366
Female, age 91, both hemispheres
78666.1
2167
Male, age 76, both hemispheres
44787.8
1939
Male, age 80, both hemispheres
24878.2
2012
Female, age 85, both hemispheres
18982.0
2361
Male, age 74, both hemispheres
18491.6
Reticulotegmental nucleus nTPM: 71725.6
2322
Female, age 91, both hemispheres
89214.5
2333
Male, age 80, both hemispheres
80390.9
2325
Male, age 76, both hemispheres
66905.9
2452
Male, age 74, both hemispheres
50391.3
Spinal trigeminal nucleus, oral nTPM: 44347.7
2164
Male, age 80, both hemispheres
77729.5
1978
Male, age 76, both hemispheres
33201.5
2737
Female, age 85, both hemispheres
22112.2
Subcoeruleus area nTPM: 31047.8
2323
Female, age 91, left hemisphere
42067.1
2451
Male, age 74, both hemispheres
35993.6
1958
Male, age 80, both hemispheres
32809.2
2089
Male, age 76, left hemisphere
26974.5
2369
Female, age 85, left hemisphere
17394.6
Superior olive nTPM: 43698.9
2561
Female, age 91, both hemispheres
90091.8
2329
Male, age 80, right hemisphere
72735.7
2020
Male, age 76, both hemispheres
20785.3
1875
Female, age 85, both hemispheres
18499.8
2364
Male, age 74, right hemisphere
16381.6
Ventral periolivary nuclei nTPM: 43677.6
2794
Female, age 91, left hemisphere
75993.2
2165
Male, age 80, both hemispheres
50715.6
2130
Female, age 85, both hemispheres
33238.1
2023
Male, age 76, both hemispheres
14763.7
Ventrolateral tegmental area, A5 NE cell group nTPM: 50429.9
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
41825.7
Pig sample
Sample description
nTPM
Pons nTPM: 41825.7
Samples: 4
Max nTPM: 48908.4
Min nTPM: 29250.2
Sample A
Female
48908.4
Sample B
Female
29250.2
Sample C
Male
44504.5
Sample D
Male
44639.8
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.
The Human Protein Atlas project is funded
