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RPL39
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TISSUE PRIMARY DATA OVARY Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Ovary
Tissue proteome
Ovary
OVARY - Expression summary
Protein expression
Ovaryi

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Ovarian stroma cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:5402.4 nTPM
HPA:5402.4 nTPM
GTEx:4257.4 nTPM
FANTOM5:53.4 Scaled Tags Per Million

OVARY - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA047105
Ovarian stroma cells Not detected



OVARY - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Average nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

5402.4
overview
Female, age 64
Ovary sample 192
nTPM: 2677.7
Cell types%
Stromal cells:
70

Smooth muscle cells:
15

Other cell types:
15

overview
Female, age 52
Ovary sample 193
nTPM: 4566.4
Cell types%
Stromal cells:
95

Other cell types:
5

overview
Female, age 80
Ovary sample 308
nTPM: 3902.3
Cell types%
Stromal cells:
70

Smooth muscle cells:
25

Other cell types:
5

N/A
Female, age 7
Ovary sample 3662
nTPM: 3484.5
N/A
Female, age 16
Ovary sample 3663
nTPM: 15902.8
N/A
Female, age 20
Ovary sample 3664
nTPM: 4563.4
N/A
Female, age 32
Ovary sample 3665
nTPM: 2719.6

OVARY - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

4257.4
GTEx sample id Sample description nTPM
Ovary
Average nTPM: 4257.4
Samples: 180

Max nTPM: 11013.1
Min nTPM: 1475.8
Std nTPM: 1768.1
Median nTPM: 3804.3
GTEX-1H2FU-2326-SM-9WG7R 60-69 years, female 11013.1
GTEX-WWYW-2726-SM-4MVOP 50-59 years, female 10846.4
GTEX-13OVI-0726-SM-5L3DD 60-69 years, female 10033.8
GTEX-1F52S-2226-SM-7MXVE 60-69 years, female 9545.5
GTEX-1F6RS-2726-SM-7MKHA 60-69 years, female 9502.2
GTEX-1LKK1-1626-SM-EVR4Y 50-59 years, female 9498.7
GTEX-1F88E-2026-SM-7MXVP 60-69 years, female 8590.0
GTEX-16MT8-2226-SM-6LPK2 60-69 years, female 8574.5
GTEX-183WM-1926-SM-72D5F 70-79 years, female 8572.2
GTEX-1A8FM-2226-SM-7PC1C 50-59 years, female 7318.9
GTEX-SN8G-2426-SM-EVR31 50-59 years, female 7276.5
GTEX-13OVJ-2426-SM-5KM3I 50-59 years, female 7134.9
GTEX-QVJO-3126-SM-COH22 60-69 years, female 7059.0
GTEX-1J1OQ-1626-SM-CE6TB 40-49 years, female 6937.9
GTEX-1F5PL-1626-SM-7MXTY 40-49 years, female 6645.8
GTEX-ZAJG-2726-SM-5S2MU 50-59 years, female 6645.3
GTEX-RTLS-2326-SM-46MUH 60-69 years, female 6643.0
GTEX-15DDE-2326-SM-6AJA8 50-59 years, female 6403.4
GTEX-TSE9-2226-SM-4DXUR 60-69 years, female 6328.7
GTEX-15UF6-2026-SM-6LPI3 70-79 years, female 6280.7
GTEX-1RDX4-0826-SM-E9TK7 50-59 years, female 6273.2
GTEX-145MI-2626-SM-5QGQ8 60-69 years, female 6253.8
GTEX-XMD3-2326-SM-4AT5H 50-59 years, female 6184.6
GTEX-11EMC-1726-SM-5H11P 60-69 years, female 6144.9
GTEX-11ZTS-1926-SM-5CVLA 60-69 years, female 6035.1
GTEX-1J8JJ-0826-SM-AHZ3F 60-69 years, female 5941.6
GTEX-1F48J-2326-SM-7MKG3 50-59 years, female 5922.2
GTEX-15EOM-1526-SM-68723 20-29 years, female 5921.3
GTEX-1A32A-2726-SM-73KVU 50-59 years, female 5803.7
GTEX-1313W-2726-SM-5P9IX 50-59 years, female 5778.4
GTEX-1269C-1826-SM-5N9E1 60-69 years, female 5761.8
GTEX-1B933-2126-SM-7MGXR 50-59 years, female 5674.2
GTEX-WYBS-2426-SM-4ONDI 60-69 years, female 5656.6
GTEX-13X6H-1026-SM-5SIBE 50-59 years, female 5646.4
GTEX-ZVT3-2626-SM-5GU5L 60-69 years, female 5632.7
GTEX-PLZ4-2826-SM-3P617 50-59 years, female 5601.5
GTEX-X8HC-2726-SM-46MUA 50-59 years, female 5550.1
GTEX-14AS3-1326-SM-5RQJE 40-49 years, female 5412.0
GTEX-1S5ZU-2326-SM-EAZ5B 20-29 years, female 5384.0
GTEX-1OJC4-2026-SM-E6CQW 50-59 years, female 5339.8
GTEX-RU72-2226-SM-46MUE 50-59 years, female 5171.6
GTEX-1EWIQ-2226-SM-7MGXJ 70-79 years, female 5164.8
GTEX-14PJM-2426-SM-686ZC 50-59 years, female 5090.0
GTEX-1H1CY-1926-SM-9WG7X 60-69 years, female 5084.3
GTEX-OHPK-2426-SM-3MJGH 50-59 years, female 5005.0
GTEX-14BIN-1426-SM-664NI 50-59 years, female 4899.1
GTEX-QDT8-2226-SM-EZ6LT 30-39 years, female 4868.3
GTEX-1K9T9-2426-SM-DHXKT 50-59 years, female 4799.2
GTEX-12ZZX-2026-SM-5LZV9 40-49 years, female 4777.8
GTEX-W5WG-0926-SM-4RTX9 50-59 years, female 4770.3
GTEX-139D8-2426-SM-5KM3A 30-39 years, female 4755.4
GTEX-1LNCM-0926-SM-DHXK5 50-59 years, female 4696.1
GTEX-WI4N-2526-SM-4OOSE 40-49 years, female 4668.2
GTEX-YFC4-2726-SM-5IFJW 40-49 years, female 4656.3
GTEX-145LS-2326-SM-5TDCY 60-69 years, female 4652.2
GTEX-S4P3-0926-SM-4AD54 50-59 years, female 4646.3
GTEX-11ZVC-1426-SM-5EGGA 50-59 years, female 4643.7
GTEX-1QP28-1326-SM-DPRXZ 50-59 years, female 4617.2
GTEX-18A7A-2626-SM-7LG6L 50-59 years, female 4617.1
GTEX-1PIEJ-1626-SM-E6CP9 20-29 years, female 4592.1
GTEX-13SLX-2426-SM-664OM 50-59 years, female 4500.7
GTEX-131YS-2226-SM-5P9G8 60-69 years, female 4468.4
GTEX-RWS6-1026-SM-47JXD 60-69 years, female 4401.3
GTEX-16NGA-0426-SM-7LG6K 40-49 years, female 4394.6
GTEX-S32W-1226-SM-4AD67 50-59 years, female 4386.2
GTEX-1I4MK-1526-SM-CE6T1 50-59 years, female 4351.8
GTEX-11XUK-1626-SM-5GU5O 40-49 years, female 4347.6
GTEX-YJ8O-1026-SM-5CVM5 40-49 years, female 4293.4
GTEX-13QIC-1526-SM-5IJFL 60-69 years, female 4241.0
GTEX-1LGRB-2326-SM-CNNPU 50-59 years, female 4240.4
GTEX-1MCC2-1026-SM-EVR5I 30-39 years, female 4237.5
GTEX-1HCUA-1326-SM-9WPP6 50-59 years, female 4234.2
GTEX-1QPFJ-1726-SM-EXOJU 30-39 years, female 4144.4
GTEX-T2IS-2026-SM-4DM6W 20-29 years, female 4131.0
GTEX-13PL7-2326-SM-5L3FY 60-69 years, female 4043.9
GTEX-11EM3-1726-SM-5N9D1 20-29 years, female 4042.7
GTEX-ZVT2-0326-SM-5E44G 50-59 years, female 4007.9
GTEX-XUW1-0126-SM-4BOOQ 50-59 years, female 3986.5
GTEX-T5JW-0426-SM-4DM7M 20-29 years, female 3972.2
GTEX-13U4I-2126-SM-5LU55 40-49 years, female 3926.1
GTEX-14PKU-1226-SM-686ZM 40-49 years, female 3910.9
GTEX-15DYW-2626-SM-6LPK7 60-69 years, female 3901.5
GTEX-Y3IK-2026-SM-4YCDG 50-59 years, female 3900.8
GTEX-TMMY-1726-SM-4DXTD 40-49 years, female 3884.8
GTEX-PWN1-2426-SM-48TDD 40-49 years, female 3880.5
GTEX-13PVR-1226-SM-5RQJ2 60-69 years, female 3875.4
GTEX-12WSJ-1226-SM-5LU91 40-49 years, female 3830.5
GTEX-P78B-1926-SM-3P616 40-49 years, female 3821.5
GTEX-11P81-1526-SM-5P9GS 30-39 years, female 3808.5
GTEX-ZPIC-1426-SM-4WWCP 40-49 years, female 3806.8
GTEX-12WSK-1926-SM-5LZVK 40-49 years, female 3801.8
GTEX-ZC5H-2026-SM-5CVN2 40-49 years, female 3796.8
GTEX-1JN1M-2126-SM-D4P2X 60-69 years, female 3790.4
GTEX-11GSP-0226-SM-5A5KV 60-69 years, female 3778.5
GTEX-14PN3-1526-SM-6ETZM 60-69 years, female 3768.7
GTEX-ZLWG-0926-SM-4WWC3 50-59 years, female 3727.8
GTEX-OHPL-2426-SM-48TDN 60-69 years, female 3688.5
GTEX-QCQG-1426-SM-48U22 50-59 years, female 3634.0
GTEX-PWCY-1326-SM-48TCU 20-29 years, female 3628.9
GTEX-11I78-1926-SM-59878 50-59 years, female 3626.2
GTEX-1C475-0426-SM-7P8OU 40-49 years, female 3611.9
GTEX-15ER7-2326-SM-7KUN3 20-29 years, female 3607.3
GTEX-132AR-1426-SM-5IFF1 50-59 years, female 3556.2
GTEX-14DAQ-2226-SM-5YYAD 60-69 years, female 3533.7
GTEX-1HBPH-2726-SM-A96TW 40-49 years, female 3531.4
GTEX-1HSGN-2426-SM-C1YRI 40-49 years, female 3526.5
GTEX-1LVAM-1826-SM-DHXKR 50-59 years, female 3518.6
GTEX-12WSG-1426-SM-5FQUK 50-59 years, female 3515.2
GTEX-18D9A-0826-SM-718C1 30-39 years, female 3506.8
GTEX-U3ZN-1026-SM-4DXTC 30-39 years, female 3496.1
GTEX-1MA7W-1426-SM-EV7A1 20-29 years, female 3492.0
GTEX-1GN1W-1426-SM-9JGHP 50-59 years, female 3481.5
GTEX-S341-0726-SM-4AD5R 40-49 years, female 3457.6
GTEX-1GZHY-2426-SM-9JGGK 50-59 years, female 3457.2
GTEX-UJHI-1226-SM-4IHLR 50-59 years, female 3436.4
GTEX-13D11-1126-SM-5KLYS 50-59 years, female 3433.1
GTEX-13O3O-2726-SM-5KM35 60-69 years, female 3409.2
GTEX-XYKS-1726-SM-4E3IO 60-69 years, female 3396.5
GTEX-11VI4-1026-SM-5EQM1 40-49 years, female 3389.3
GTEX-13QBU-1526-SM-5LU3W 40-49 years, female 3385.8
GTEX-14PKV-1226-SM-6871T 20-29 years, female 3383.1
GTEX-WYVS-1526-SM-4OND4 40-49 years, female 3371.1
GTEX-X4EO-2426-SM-4QASD 60-69 years, female 3365.8
GTEX-P4QT-2426-SM-3NMCL 50-59 years, female 3329.6
GTEX-145ME-1226-SM-5SIB6 40-49 years, female 3325.5
GTEX-T6MO-1126-SM-4DM5D 40-49 years, female 3305.6
GTEX-12WSD-2726-SM-59HLR 60-69 years, female 3235.5
GTEX-1CAMS-2126-SM-7MXTF 40-49 years, female 3230.1
GTEX-X15G-1726-SM-4PQZN 50-59 years, female 3224.8
GTEX-1IDJE-1126-SM-A96SO 50-59 years, female 3203.6
GTEX-ZP4G-0626-SM-4WWF1 20-29 years, female 3192.2
GTEX-1PBJI-2026-SM-DPRYF 20-29 years, female 3177.8
GTEX-13W3W-1526-SM-5LU5I 60-69 years, female 3163.1
GTEX-P4PP-2426-SM-3P61L 30-39 years, female 3157.6
GTEX-1QP67-1526-SM-E76P4 40-49 years, female 3147.9
GTEX-ZYFG-1726-SM-5GZZB 60-69 years, female 3147.3
GTEX-17JCI-2326-SM-7IGPC 60-69 years, female 3138.4
GTEX-Y114-1726-SM-4TT7U 50-59 years, female 3135.3
GTEX-ZYY3-2726-SM-5EGH4 60-69 years, female 3115.8
GTEX-PX3G-2426-SM-48TZZ 20-29 years, female 3093.1
GTEX-1R9PN-0626-SM-E6CR9 40-49 years, female 3074.3
GTEX-11DXX-1426-SM-5GIDU 60-69 years, female 3043.8
GTEX-XV7Q-1426-SM-4BRWA 40-49 years, female 3043.7
GTEX-13N11-0526-SM-5IJFI 50-59 years, female 3042.5
GTEX-S7SF-1326-SM-4AD4P 20-29 years, female 2997.9
GTEX-14BMU-1726-SM-5TDE8 20-29 years, female 2994.9
GTEX-ZZPU-2126-SM-5EGIU 50-59 years, female 2986.4
GTEX-13FTX-0926-SM-5IFF7 20-29 years, female 2881.8
GTEX-15SDE-0926-SM-6LPIA 50-59 years, female 2881.1
GTEX-1QEPI-2726-SM-DPRZ6 60-69 years, female 2820.3
GTEX-133LE-1226-SM-5IFGC 20-29 years, female 2817.7
GTEX-1IKOE-2326-SM-A8N99 30-39 years, female 2765.5
GTEX-131XG-1926-SM-5LZVG 50-59 years, female 2761.7
GTEX-TML8-0926-SM-4DXSJ 40-49 years, female 2759.8
GTEX-1LGOU-1026-SM-DHXL4 20-29 years, female 2755.0
GTEX-XUZC-1026-SM-4BOPY 30-39 years, female 2668.1
GTEX-1KANC-1026-SM-D3LAA 50-59 years, female 2630.5
GTEX-WXYG-1426-SM-4ONCK 50-59 years, female 2565.3
GTEX-1399S-2126-SM-5J2MH 30-39 years, female 2554.8
GTEX-11ZTT-1826-SM-5CVLN 60-69 years, female 2525.5
GTEX-1JN76-1426-SM-AHZ4F 20-29 years, female 2525.4
GTEX-14JG6-0626-SM-68716 30-39 years, female 2508.9
GTEX-Q734-0726-SM-48TZP 40-49 years, female 2501.7
GTEX-1AMFI-1426-SM-731EL 50-59 years, female 2484.2
GTEX-1AMEY-0926-SM-72D6G 30-39 years, female 2464.7
GTEX-1ICG6-1526-SM-C1YQT 70-79 years, female 2462.3
GTEX-POMQ-1426-SM-3P61D 20-29 years, female 2405.5
GTEX-146FH-2526-SM-5Q5BP 50-59 years, female 2332.1
GTEX-13VXT-1526-SM-5LU3J 20-29 years, female 2287.2
GTEX-RU1J-0826-SM-46MUU 20-29 years, female 2258.6
GTEX-1399U-1726-SM-5P9J4 50-59 years, female 2204.3
GTEX-R55G-1526-SM-48FER 40-49 years, female 2056.5
GTEX-1IDJU-1126-SM-A9G2S 60-69 years, female 1967.9
GTEX-ZV6S-1426-SM-59HKX 40-49 years, female 1933.2
GTEX-1GN1U-2326-SM-9MQK4 50-59 years, female 1874.1
GTEX-1LVAN-2726-SM-CNPQG 50-59 years, female 1752.4
GTEX-WEY5-0626-SM-4LMIA 40-49 years, female 1702.1
GTEX-15FZZ-0826-SM-6LLJO 30-39 years, female 1655.2
GTEX-1F88F-2126-SM-9KNUK 60-69 years, female 1561.0
GTEX-1GF9X-2426-SM-7SB7W 40-49 years, female 1475.8
Show allShow less

OVARY - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

53.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Ovary
Scaled Tags Per Million: 53.4
FF:10020-101D2 47,75,84 years, female 53.4

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