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TISSUE PRIMARY DATA KIDNEY Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Kidney
Tissue proteome
Kidney
KIDNEY - Expression summary
Protein expression
Kidneyi

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Cells in glomeruli: Low
Cells in tubules: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:132084.4 nTPM
HPA:52063.1 nTPM
GTEx:132084.4 nTPM

KIDNEY - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA042788
Cells in glomeruli Low
Cells in tubules Medium



KIDNEY - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Average nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

52063.1
overview
Female, age 58
Kidney sample 55
nTPM: 21132.7
Cell types%
Cells in tubules:
60

Cells in glomeruli:
20

Fibroblasts:
5

Other cell types:
15

overview
Female, age 67
Kidney sample 56
nTPM: 46916.3
Cell types%
Cells in tubules:
70

Cells in glomeruli:
15

Fibroblasts:
10

Other cell types:
5

overview
Female, age 55
Kidney sample 57
nTPM: 32574.8
Cell types%
Cells in tubules:
80

Cells in glomeruli:
10

Fibroblasts:
5

Other cell types:
5

overview
Male, age 46
Kidney sample 58
nTPM: 45093
Cell types%
Cells in tubules:
60

Cells in glomeruli:
25

Fibroblasts:
5

Other cell types:
10

overview
Female, age 57
Kidney sample 358
nTPM: 108592.6
Cell types%
Cells in tubules:
60

Cells in glomeruli:
10

Fibroblasts:
10

Other cell types:
20

overview
Male, age 78
Kidney sample 377
nTPM: 45683.3
Cell types%
Cells in tubules:
65

Cells in glomeruli:
10

Fibroblasts:
5

Other cell types:
20

overview
Male, age 73
Kidney sample 380
nTPM: 79647.3
Cell types%
Cells in tubules:
60

Cells in glomeruli:
10

Fibroblasts:
10

Other cell types:
20

overview
Female, age 59
Kidney sample 394
nTPM: 40610
Cell types%
Cells in tubules:
65

Cells in glomeruli:
10

Fibroblasts:
10

Other cell types:
15

overview
Female, age 48
Kidney sample 414
nTPM: 48317.8
Cell types%
Cells in tubules:
60

Cells in glomeruli:
5

Fibroblasts:
10

Other cell types:
25


KIDNEY - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

132084.4
GTEx sample id Sample description nTPM
Kidney - Cortex
Average nTPM: 132084.4
Samples: 85

Max nTPM: 326505.4
Min nTPM: 7386.3
Std nTPM: 89333.9
Median nTPM: 120545.5
GTEX-1GN1U-2126-SM-AHZ4J 50-59 years, female 326505.4
GTEX-13OW6-1826-SM-5N9F9 50-59 years, male 324123.4
GTEX-1JJ6O-2526-SM-AHZ3J 60-69 years, male 323850.9
GTEX-11OF3-1326-SM-5N9FJ 60-69 years, male 308799.3
GTEX-17HHY-2326-SM-7KFSR 50-59 years, male 307447.2
GTEX-ZDXO-0226-SM-4WKH7 60-69 years, male 298714.2
GTEX-1HCU7-1826-SM-A9G2A 50-59 years, male 281463.3
GTEX-15DYW-2026-SM-6AJBD 60-69 years, female 281052.9
GTEX-1A8FM-2026-SM-7P8RN 50-59 years, female 265582.5
GTEX-1GMR3-2426-SM-7MXV2 40-49 years, male 247295.9
GTEX-1E2YA-1626-SM-7MGXS 50-59 years, male 246450.7
GTEX-1KWVE-0826-SM-CXZKO 30-39 years, male 240519.2
GTEX-1I1GP-1926-SM-CNNQU 50-59 years, male 233348.7
GTEX-1GF9V-1926-SM-9JGHE 60-69 years, male 231400.9
GTEX-1C6VQ-2326-SM-7IGN1 50-59 years, male 230234.8
GTEX-1JMLX-1526-SM-AHZ3N 50-59 years, male 211675.4
GTEX-REY6-1826-SM-EAZAT 60-69 years, male 210617.1
GTEX-1NV8Z-2226-SM-EXOJ2 60-69 years, male 208005.0
GTEX-1EKGG-2226-SM-7IGOA 60-69 years, male 195747.5
GTEX-NPJ8-2226-SM-3TW8D 40-49 years, male 192768.8
GTEX-1HBPI-2026-SM-CE6RZ 50-59 years, male 187427.6
GTEX-14C5O-2026-SM-5YYB1 60-69 years, male 186331.9
GTEX-1F48J-2226-SM-7MXTN 50-59 years, female 185322.0
GTEX-S33H-1426-SM-EZ6L7 30-39 years, male 183964.4
GTEX-14C39-2126-SM-664OH 40-49 years, male 183843.6
GTEX-T5JC-1526-SM-4DM68 20-29 years, male 181561.1
GTEX-1LG7Y-2726-SM-D5OVW 50-59 years, male 180298.4
GTEX-1H3NZ-2126-SM-9WPQ6 60-69 years, male 180214.7
GTEX-1BAJH-1826-SM-731DA 70-79 years, male 179577.5
GTEX-1QP6S-1526-SM-EXUSG 40-49 years, male 175801.3
GTEX-15CHQ-2126-SM-6871M 60-69 years, male 173200.3
GTEX-14E6D-2526-SM-5YYA9 50-59 years, male 168606.9
GTEX-ZC5H-1726-SM-5HL7X 40-49 years, female 167054.0
GTEX-O5YV-1226-SM-EV795 60-69 years, female 159623.0
GTEX-1IKK5-0926-SM-A9G2U 60-69 years, male 153881.5
GTEX-1GTWX-1826-SM-9QEHG 60-69 years, male 151797.6
GTEX-1GF9W-1326-SM-7P8PX 60-69 years, male 149478.2
GTEX-Y5V5-1226-SM-EYYVP 60-69 years, female 142228.2
GTEX-17F96-1926-SM-7MGWY 70-79 years, male 140458.7
GTEX-11GS4-2326-SM-5A5KS 60-69 years, male 139512.0
GTEX-Y5V6-2026-SM-5IFHO 60-69 years, male 138316.8
GTEX-16MT8-1926-SM-7EPGL 60-69 years, female 133811.9
GTEX-13O1R-2526-SM-5N9FW 60-69 years, male 120545.5
GTEX-1N2EF-1426-SM-EXUSH 60-69 years, male 115967.9
GTEX-1K9T9-1826-SM-CXZK2 50-59 years, female 112486.7
GTEX-13OVL-1826-SM-5KLZR 50-59 years, male 112210.9
GTEX-QDT8-1726-SM-EYYV6 30-39 years, female 101449.2
GTEX-QDVN-1626-SM-48TZC 50-59 years, male 100281.4
GTEX-P4QS-1126-SM-3NMD5 60-69 years, male 96783.9
GTEX-1J1OQ-1426-SM-AHZ3P 40-49 years, female 90578.9
GTEX-1CB4J-1926-SM-7MGX8 60-69 years, male 88368.4
GTEX-1JMQK-1926-SM-CJI3B 60-69 years, male 82977.2
GTEX-1H3VY-1926-SM-9JGHJ 50-59 years, male 82397.4
GTEX-13RTJ-2226-SM-5S2Q1 60-69 years, male 73048.4
GTEX-ZYT6-2226-SM-5GIC9 30-39 years, male 66006.4
GTEX-1497J-0826-SM-5NQAJ 60-69 years, male 64798.9
GTEX-13112-2126-SM-5GCO4 50-59 years, male 64405.6
GTEX-T6MN-1826-SM-EXOHN 50-59 years, male 62249.2
GTEX-1JMQJ-1726-SM-E9U4V 50-59 years, male 61617.0
GTEX-12WSG-0826-SM-5EQ5A 50-59 years, female 58578.3
GTEX-13NYB-1726-SM-5N9G2 40-49 years, male 57914.3
GTEX-ZYFG-1626-SM-5GZYY 60-69 years, female 56586.8
GTEX-1IL2V-1826-SM-ARU7R 70-79 years, male 54563.2
GTEX-ZVZP-0926-SM-5GIDB 50-59 years, male 53125.0
GTEX-1OJC4-2326-SM-DTXA5 50-59 years, female 52293.2
GTEX-147F4-2626-SM-5Q5CS 50-59 years, male 52024.3
GTEX-1PWST-2226-SM-EVR3G 70-79 years, male 49517.7
GTEX-12696-0926-SM-5FQTV 60-69 years, male 46111.4
GTEX-1HB9E-1826-SM-D4P33 50-59 years, male 46086.9
GTEX-XPVG-0526-SM-4B65N 50-59 years, male 45821.6
GTEX-QLQW-1626-SM-CMKFE 30-39 years, male 43777.5
GTEX-13OVI-1126-SM-5KLZF 60-69 years, female 32118.5
GTEX-ZLFU-0926-SM-5P9F8 40-49 years, male 31909.3
GTEX-1399S-0526-SM-5IJG8 30-39 years, female 29877.1
GTEX-1MUQO-2526-SM-E9TJN 60-69 years, male 29834.3
GTEX-1JMPZ-1226-SM-ARU8Y 30-39 years, male 28501.1
GTEX-1A3MW-2226-SM-73KUX 60-69 years, female 27098.0
GTEX-145MN-0326-SM-5QGQI 30-39 years, male 23673.3
GTEX-ZE9C-1426-SM-4WKGM 60-69 years, male 20685.2
GTEX-1R9PO-1626-SM-E6CPT 60-69 years, female 19433.7
GTEX-RN64-1626-SM-48FD7 50-59 years, male 18200.0
GTEX-1AX8Z-2326-SM-731CR 60-69 years, male 17748.8
GTEX-1N2DW-1826-SM-EAZ54 50-59 years, male 12825.0
GTEX-11TTK-1926-SM-5PNW8 60-69 years, female 7394.5
GTEX-17F97-1926-SM-7IGM4 50-59 years, male 7386.3
Show allShow less
Kidney - Medulla
Average nTPM: 62657.9
Samples: 4

Max nTPM: 95782.4
Min nTPM: 37439.1
Std nTPM: 22109.7
Median nTPM: 58705.0
GTEX-RU72-1926-SM-EAZ3F 50-59 years, female 95782.4
GTEX-TKQ2-0626-SM-EZ6LB 50-59 years, male 68474.8
GTEX-T5JC-1626-SM-EZ6KW 20-29 years, male 48935.1
GTEX-R55E-2026-SM-EZ6L1 20-29 years, male 37439.1

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