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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:103.6 nTPM
HPA Brain:214.9 nTPM
GTEx:103.6 nTPM
FANTOM5:492.8 Scaled Tags Per Million
Pig:106.4 nTPM
Mouse:136.0 nTPM
Allen mouse:5.8 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA034635Antibody HPA069977Antibody HPA071875Antibody CAB009108
Glial cells Not detectedLowMediumNot detected
Neuronal cells MediumMediumHighMedium








BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

214.9
Sample id Sample description nTPM
Caudate nucleus
nTPM: 202.4
2846 Female, age 79, unknown 233.1
1781 Male, age 74, unknown 229.1
2288 Male, age 75, left hemisphere 219.7
2290 Female, age 72, unknown 211.1
1857 Female, age 85, left hemisphere 206.2
1854 Male, age 80, left hemisphere 190.1
2481 Female, age 94, left hemisphere 165.3
2289 Male, age 61, right hemisphere 164.6
Globus pallidus, externus
nTPM: 207.6
2395 Male, age 75, both hemispheres 239.7
2772 Female, age 79, unknown 208.4
2567 Female, age 72, unknown 205.0
2646 Male, age 61, right hemisphere 203.3
1996 Male, age 80, right hemisphere 181.4
Globus pallidus, internus
nTPM: 197.5
2287 Male, age 75, right hemisphere 267.9
2483 Female, age 94, right hemisphere 225.4
2566 Female, age 72, unknown 187.2
2111 Female, age 85, right hemisphere 185.4
2778 Female, age 91, both hemispheres 185.1
1818 Male, age 74, unknown 180.9
2037 Male, age 80, right hemisphere 150.4
Nucleus accumbens
nTPM: 201.4
1783 Male, age 74, unknown 243.5
1856 Female, age 91, right hemisphere 225.0
1806 Female, age 85, left hemisphere 211.0
2824 Male, age 61, right hemisphere 205.5
2698 Female, age 72, unknown 202.7
2286 Male, age 75, left hemisphere 192.2
2391 Female, age 94, left hemisphere 182.2
2732 Male, age 80, right hemisphere 148.9
Nucleus basalis of Meynert
nTPM: 193.2
2569 Male, age 61, both hemispheres 207.1
2821 Male, age 75, both hemispheres 203.9
2484 Female, age 94, left hemisphere 194.3
2393 Male, age 80, right hemisphere 167.6
Nucleus of the diagonal band
nTPM: 214.9
2775 Male, age 80, right hemisphere 242.5
1812 Female, age 91, both hemispheres 227.3
2195 Female, age 85, both hemispheres 226.4
2029 Male, age 61, right hemisphere 217.6
1979 Male, age 74, unknown 160.7
Putamen
nTPM: 214.2
2647 Male, age 75, left hemisphere 250.5
2466 Female, age 79, unknown 233.6
1829 Male, age 74, unknown 225.4
1937 Female, age 91, right hemisphere 212.4
1838 Male, age 80, right hemisphere 201.9
2489 Female, age 72, unknown 198.7
2482 Female, age 94, left hemisphere 177.1
Septal nuclei
nTPM: 195.4
1960 Male, age 74, unknown 275.5
2031 Female, age 72, unknown 220.3
2629 Female, age 94, right hemisphere 209.3
2059 Female, age 85, both hemispheres 185.1
2009 Female, age 91, both hemispheres 181.3
2394 Male, age 61, left hemisphere 162.4
2199 Male, age 80, right hemisphere 134.0
Stria terminalis, bed nucleus
nTPM: 207.1
1974 Female, age 91, both hemispheres 248.2
2486 Female, age 94, both hemispheres 212.6
2201 Male, age 74, unknown 160.5

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

103.6
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 91.0
Samples: 246

Max nTPM: 175.9
Min nTPM: 37.7
Std nTPM: 26.8
Median nTPM: 89.0
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 175.9
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 164.0
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 153.2
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 148.2
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 148.0
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 147.4
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 145.9
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 145.8
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 144.7
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 144.2
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 144.0
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 141.0
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 140.2
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 138.7
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 137.2
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 137.2
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 136.1
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 134.8
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 134.6
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 133.1
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 132.6
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 131.4
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 131.1
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 129.0
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 128.3
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 128.1
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 127.8
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 125.5
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 125.5
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 122.5
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 122.4
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 122.4
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 122.0
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 121.3
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 120.5
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 120.4
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 120.2
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 119.3
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 118.7
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 118.3
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 118.0
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 117.7
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 117.2
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 117.0
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 116.4
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 116.4
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 114.9
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 114.6
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 114.6
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 114.3
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 114.3
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 113.7
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 112.9
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 112.7
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 112.3
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 111.6
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 111.2
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 111.0
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 110.0
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 109.6
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 109.3
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 108.7
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 108.5
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 108.4
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 107.7
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 107.5
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 107.3
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 107.2
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 107.0
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 107.0
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 106.9
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 106.8
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 106.8
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 105.9
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 105.7
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 105.5
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 104.9
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 104.7
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 104.6
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 104.2
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 103.6
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 103.4
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 102.1
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 101.9
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 101.3
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 100.1
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 99.3
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 98.5
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 98.4
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 97.8
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 97.4
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 96.8
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 96.6
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 96.5
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 96.3
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 96.2
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 95.9
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 95.1
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 94.8
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 94.8
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 94.0
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 93.8
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 93.7
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 93.6
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 93.3
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 93.1
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 93.1
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 93.1
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 93.0
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 93.0
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 92.9
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 92.7
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 92.7
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 92.5
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 92.2
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 91.8
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 91.1
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 91.0
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 90.0
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 90.0
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 89.9
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 89.8
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 89.0
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 88.9
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 88.5
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 88.4
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 87.9
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 87.4
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 86.3
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 86.0
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 85.4
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 85.3
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 85.1
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 85.0
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 84.9
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 84.8
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 84.7
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 84.7
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 84.4
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 84.3
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 84.3
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 84.2
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 84.0
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 83.0
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 82.5
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 81.8
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 81.3
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 80.9
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 80.8
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 80.3
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 80.0
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 79.8
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 79.5
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 79.5
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 79.4
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 79.4
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 78.6
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 78.4
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 78.4
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 78.1
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 78.0
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 77.3
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 77.1
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 76.9
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 76.7
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 76.6
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 76.1
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 75.3
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 75.3
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 73.9
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 73.9
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 73.5
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 73.4
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 73.2
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 72.8
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 72.6
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 72.5
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 72.4
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 72.4
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 72.3
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 72.3
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 71.6
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 71.5
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 71.5
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 71.3
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 71.1
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 70.9
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 70.8
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 70.7
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 70.6
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 70.5
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 70.2
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 69.9
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 68.3
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 68.2
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 67.9
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 66.9
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 66.5
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 65.8
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 65.4
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 65.3
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 64.8
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 64.7
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 63.9
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 62.8
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 62.8
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 62.3
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 62.0
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 62.0
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 61.4
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 61.4
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 60.6
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 60.2
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 60.0
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 59.7
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 59.5
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 59.0
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 58.6
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 58.5
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 58.4
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 58.3
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 57.7
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 56.7
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 55.7
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 55.7
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 55.2
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 54.1
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 52.9
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 52.5
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 52.5
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 52.1
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 51.9
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 51.5
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 51.5
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 51.1
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 50.2
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 49.9
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 49.2
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 49.2
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 48.6
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 47.7
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 46.1
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 44.0
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 43.4
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 42.5
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 37.7
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 98.6
Samples: 246

Max nTPM: 185.6
Min nTPM: 15.4
Std nTPM: 33.4
Median nTPM: 102.0
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 185.6
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 185.5
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 172.3
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 169.2
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 168.8
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 162.5
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 158.9
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 152.9
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 152.0
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 151.5
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 151.2
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 151.1
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 150.0
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 150.0
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 148.0
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 147.6
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 147.6
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 147.5
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 146.1
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 144.6
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 143.2
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 142.8
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 142.3
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 141.4
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 140.0
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 140.0
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 139.5
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 138.6
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 138.6
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 138.5
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 138.3
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 137.9
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 137.8
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 137.3
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 137.3
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 136.5
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 135.9
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 135.1
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 135.0
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 134.9
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 134.1
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 133.1
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 132.5
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 132.1
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 132.1
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 130.8
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 128.1
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 127.6
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 127.5
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 127.1
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 126.6
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 126.4
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 126.2
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 125.4
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 124.9
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 124.3
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 123.5
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 123.0
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 122.9
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 122.8
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 121.7
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 120.6
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 120.4
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 120.3
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 120.0
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 119.8
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 119.8
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 119.8
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 119.2
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 118.6
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 118.6
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 118.6
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 118.5
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 117.8
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 117.5
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 117.0
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 116.8
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 116.8
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 116.6
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 116.4
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 115.9
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 115.8
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 115.8
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 115.2
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 114.2
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 113.2
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 112.8
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 112.7
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 112.5
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 112.4
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 111.9
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 111.6
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 111.3
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 110.0
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 109.1
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 108.9
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 108.8
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 108.7
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 108.2
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 108.1
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 108.1
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 108.0
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 107.9
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 107.8
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 107.7
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 107.6
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 107.3
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 107.0
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 106.4
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 106.2
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 105.7
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 105.4
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 105.1
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 104.9
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 104.7
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 104.7
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 104.7
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 104.6
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 104.1
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 103.6
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 103.2
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 102.5
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 102.1
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 102.0
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 101.7
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 101.7
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 101.1
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 101.1
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 100.5
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 99.6
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 99.2
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 99.0
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 98.6
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 98.5
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 98.4
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 98.2
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 97.4
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 97.3
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 96.7
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 96.4
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 95.6
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 95.5
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 94.5
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 93.0
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 93.0
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 92.9
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 92.5
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 91.6
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 91.5
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 90.8
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 90.6
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 90.5
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 90.1
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 89.2
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 88.9
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 88.3
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 88.0
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 87.9
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 87.7
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 86.6
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 85.0
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 84.1
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 84.0
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 83.3
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 82.4
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 81.0
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 80.9
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 80.6
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 80.5
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 80.2
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 80.1
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 80.1
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 79.7
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 79.6
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 78.8
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 78.2
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 77.2
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 76.6
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 75.7
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 75.7
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 75.0
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 74.4
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 74.3
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 73.7
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 72.9
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 72.5
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 71.0
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 69.1
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 68.6
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 68.0
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 67.1
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 66.5
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 65.9
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 65.9
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 65.7
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 65.4
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 64.4
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 63.3
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 63.2
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 62.7
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 62.3
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 60.6
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 59.3
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 59.1
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 58.7
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 58.0
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 58.0
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 57.7
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 57.3
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 57.1
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 56.5
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 56.1
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 55.9
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 55.2
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 54.0
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 52.0
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 51.6
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 50.7
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 50.0
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 49.9
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 49.7
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 49.5
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 49.1
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 48.3
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 48.2
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 48.2
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 48.1
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 47.8
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 47.7
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 47.3
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 47.0
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 46.0
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 45.2
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 44.6
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 44.6
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 44.3
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 44.3
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 44.1
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 43.4
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 43.1
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 42.4
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 42.2
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 41.7
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 39.9
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 39.7
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 15.4
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Brain - Putamen (basal ganglia)
Average nTPM: 103.6
Samples: 205

Max nTPM: 167.6
Min nTPM: 53.0
Std nTPM: 25.0
Median nTPM: 100.5
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 167.6
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 165.8
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 159.1
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 156.1
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 155.3
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 155.1
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 154.7
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 154.0
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 152.4
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 152.3
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 150.7
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 148.6
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 146.5
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 146.4
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 144.4
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 144.3
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 144.2
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 142.0
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 141.8
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 141.6
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 140.8
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 140.5
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 139.5
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 139.4
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 138.9
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 137.7
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 137.5
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 137.4
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 136.3
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 136.1
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 135.3
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 135.3
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 133.5
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 133.3
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 133.1
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 131.6
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 131.6
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 130.9
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 129.9
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 129.3
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 129.2
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 128.0
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 127.1
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 125.9
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 124.2
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 124.1
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 122.4
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 121.7
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 120.8
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 120.6
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 120.2
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 119.4
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 119.2
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 119.0
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 118.3
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 118.0
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 117.3
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 116.9
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 116.9
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 116.8
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 116.1
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 115.1
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 115.1
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 114.9
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 114.7
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 112.5
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 112.3
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 112.0
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 111.0
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 110.9
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 110.8
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 110.7
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 110.7
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 109.3
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 109.2
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 109.2
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 108.9
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 108.5
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 107.7
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 107.6
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 106.8
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 106.5
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 106.1
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 106.0
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 105.2
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 104.1
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 104.1
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 103.8
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 103.7
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 103.5
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 103.4
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 103.0
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 102.8
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 102.6
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 102.4
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 102.2
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 101.7
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 101.5
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 101.2
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 101.1
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 101.0
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 100.9
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 100.5
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 100.4
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 100.4
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 100.1
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 98.9
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 98.8
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 98.4
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 98.0
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 97.3
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 97.2
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 96.6
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 96.5
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 96.1
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 95.5
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 95.5
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 95.1
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 94.9
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 94.7
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 94.5
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 94.5
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 93.7
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 93.6
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 93.6
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 93.4
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 93.0
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 92.9
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 92.8
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 92.6
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 91.8
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 91.6
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 91.5
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 91.5
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 90.4
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 89.8
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 88.6
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 88.6
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 87.6
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 87.0
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 86.7
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 86.4
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 85.9
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 85.6
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 85.5
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 85.4
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 84.8
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 84.7
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 84.2
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 84.1
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 83.7
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 83.5
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 83.4
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 82.9
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 82.8
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 82.7
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 82.6
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 82.1
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 82.1
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 81.3
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 80.9
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 80.5
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 80.3
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 80.3
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 80.0
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 79.7
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 79.5
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 79.5
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 79.1
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 79.1
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 78.7
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 78.7
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 78.5
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 78.2
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 78.1
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 77.5
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 76.6
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 76.5
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 76.5
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 76.4
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 76.3
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 76.3
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 76.1
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 75.9
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 75.0
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 74.9
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 74.5
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 74.3
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 73.1
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 72.7
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 71.8
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 71.2
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 71.0
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 70.9
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 70.8
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 70.6
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 68.9
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 67.4
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 67.2
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 65.6
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 64.8
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 61.9
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 56.5
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 54.0
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 53.0
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

492.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 332.5
FF:10164-103B2 76 years, female 332.5
Nucleus accumbens
Scaled Tags Per Million: 433.7
FF:10037-101F1 23-56 years, mixed 433.7
Putamen
Scaled Tags Per Million: 492.8
FF:10176-103C5 60 years, female 492.8
Globus pallidus
Scaled Tags Per Million: 310.8
FF:10175-103C4 60 years, female 371.9
FF:10161-103A8 76 years, female 249.7

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

106.4
Pig sample Sample description nTPM
Caudate
nTPM: 98.3
Samples: 4

Max nTPM: 115.8
Min nTPM: 80.1
Sample A Female 80.1
Sample B Female 102.3
Sample C Male 115.8
Sample D Male 95.0
Putamen
nTPM: 104.9
Samples: 4

Max nTPM: 130.6
Min nTPM: 82.8
Sample A Female 82.8
Sample B Female 89.5
Sample C Male 130.6
Sample D Male 116.8
Septum
nTPM: 106.4
Samples: 4

Max nTPM: 154.1
Min nTPM: 87.9
Sample A Female 89.9
Sample B Female 87.9
Sample C Male 154.1
Sample D Male 93.7
Ventral pallidum
nTPM: 106.4
Samples: 4

Max nTPM: 148.2
Min nTPM: 85.7
Sample A Female 85.7
Sample B Female 96.5
Sample C Male 148.2
Sample D Male 95.2

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

136.0
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 125.0
Samples: 4

Max nTPM: 151.5
Min nTPM: 104.7
Sample A Male 130.9
Sample B Male 151.5
Sample C Female 104.7
Sample D Female 113.0
Septum
nTPM: 127.0
Samples: 4

Max nTPM: 153.3
Min nTPM: 108.6
Sample A Male 153.3
Sample B Male 108.6
Sample C Female 116.4
Sample D Female 129.7
Ventral forebrain
nTPM: 136.0
Samples: 4

Max nTPM: 147.5
Min nTPM: 130.3
Sample A Male 147.5
Sample B Male 130.3
Sample C Female 132.7
Sample D Female 133.5

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

5.8
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 5.8
70946413 Antisense, RP_050428_01_B04, Mouse strain C57BL/6J (56 days, male) 11.7
70795466 Antisense, RP_050712_01_F05, Mouse strain C57BL/6J (56 days, male) 0.0
Pallidum
Expression energy: 5.8
70946413 Antisense, RP_050428_01_B04, Mouse strain C57BL/6J (56 days, male) 11.6
70795466 Antisense, RP_050712_01_F05, Mouse strain C57BL/6J (56 days, male) 0.0

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