HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:101.2 nTPM
HPA Brain:239.5 nTPM
GTEx:101.2 nTPM
FANTOM5:293.7 Scaled Tags Per Million
Pig:122.4 nTPM
Mouse:135.4 nTPM
Allen mouse:8.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA034635Antibody HPA069977Antibody HPA071875Antibody CAB009108
Glial cells Not detectedLowHighNot detected
Neuronal cells LowMediumHighMedium









HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 239.5
Sample id Sample description nTPM
Hippocampus
nTPM: 198.1
1898 Male, age 80, left hemisphere 234.6
2148 Female, age 91, left hemisphere 217.1
2621 Female, age 67, right hemisphere 214.0
1855 Male, age 76, left hemisphere 182.3
2529 Female, age 94, left hemisphere 176.8
1911 Female, age 85, right hemisphere 163.8
Dentate gyrus
nTPM: 213.2
2530 Female, age 94, left hemisphere 261.8
1927 Female, age 91, both hemispheres 231.5
2531 Female, age 67, both hemispheres 215.9
2010 Male, age 76, both hemispheres 197.7
2246 Female, age 85, both hemispheres 191.7
2528 Male, age 74, both hemispheres 180.9
Entorhinal gyrus
nTPM: 233.1
2613 Female, age 94, left hemisphere 269.8
2764 Male, age 80, right hemisphere 262.0
2686 Male, age 75, right hemisphere 229.4
1938 Female, age 85, left hemisphere 227.7
1787 Male, age 76, left hemisphere 209.1
2117 Female, age 91, right hemisphere 200.7
Hippocampus, CA1
nTPM: 221.9
2749 Male, age 80, left hemisphere 337.9
1873 Female, age 85, both hemispheres 204.6
2045 Male, age 76, both hemispheres 199.7
2527 Male, age 74, both hemispheres 194.7
2082 Female, age 91, right hemisphere 172.5
Hippocampus, CA2
nTPM: 201.9
1963 Male, age 80, left hemisphere 247.9
1892 Male, age 76, both hemispheres 242.5
2437 Female, age 94, left hemisphere 207.1
1940 Female, age 85, left hemisphere 178.1
2113 Female, age 91, right hemisphere 172.0
2249 Male, age 74, both hemispheres 164.0
Hippocampus, CA3
nTPM: 207.2
2137 Male, age 80, left hemisphere 257.1
2620 Female, age 94, left hemisphere 237.1
1867 Male, age 76, both hemispheres 210.1
2861 Female, age 67, both hemispheres 210.1
1891 Female, age 85, both hemispheres 172.5
2436 Male, age 74, both hemispheres 156.1
Parahippocampal cortex
nTPM: 203.3
1850 Male, age 80, both hemispheres 240.9
2245 Female, age 91, both hemispheres 230.7
2532 Female, age 72, left hemisphere 229.1
1990 Female, age 91, right hemisphere 220.3
1933 Female, age 85, both hemispheres 207.3
2692 Male, age 74, both hemispheres 190.9
2693 Female, age 94, both hemispheres 185.4
2622 Female, age 67, right hemisphere 184.4
2018 Male, age 76, both hemispheres 172.4
2250 Female, age 67, right hemisphere 171.2
Perirhinal gyrus
nTPM: 239.5
1847 Female, age 91, left hemisphere 273.2
1794 Male, age 80, right hemisphere 259.8
2521 Female, age 94, right hemisphere 241.6
2848 Male, age 76, right hemisphere 213.3
1841 Female, age 85, right hemisphere 209.6
Subiculum
nTPM: 197.3
2438 Female, age 94, left hemisphere 222.4
1901 Male, age 80, both hemispheres 222.3
1977 Female, age 85, both hemispheres 221.4
2042 Male, age 76, both hemispheres 179.0
2619 Male, age 74, both hemispheres 173.7
2729 Female, age 91, right hemisphere 165.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 101.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 101.2
Samples: 197

Max nTPM: 186.3
Min nTPM: 40.1
Std nTPM: 28.3
Median nTPM: 97.0
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 186.3
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 179.0
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 170.3
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 166.0
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 165.6
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 165.2
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 163.0
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 161.6
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 159.6
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 158.6
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 158.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 293.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 293.7
FF:10169-103B7 60 years, female 345.8
FF:10153-102I9 76 years, female 241.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 122.4
Pig sample Sample description nTPM
Subiculum
nTPM: 117.2
Samples: 4

Max nTPM: 144.2
Min nTPM: 100.6
Sample A Female 144.2
Sample B Female 102.6
Sample C Male 121.4
Sample D Male 100.6
Dorsal hippocampus
nTPM: 113.8
Samples: 4

Max nTPM: 132.4
Min nTPM: 94.4
Sample A Female 132.4
Sample B Female 121.7
Sample C Male 106.7
Sample D Male 94.4
Entorhinal cortex
nTPM: 122.4
Samples: 4

Max nTPM: 129.5
Min nTPM: 115.7
Sample A Female 129.5
Sample B Female 115.7
Sample C Male 126.9
Sample D Male 117.4
Ventral hippocampus
nTPM: 117.2
Samples: 4

Max nTPM: 155.3
Min nTPM: 82.2
Sample A Female 117.3
Sample B Female 82.2
Sample C Male 155.3
Sample D Male 113.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 135.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 134.7
Samples: 4

Max nTPM: 147.8
Min nTPM: 123.9
Sample A Male 134.5
Sample B Male 132.6
Sample C Female 123.9
Sample D Female 147.8
Hippocampal formation
nTPM: 135.5
Samples: 4

Max nTPM: 147.5
Min nTPM: 112.0
Sample A Male 112.0
Sample B Male 147.5
Sample C Female 138.4
Sample D Female 144.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 8.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 8.4
70946413 Antisense, RP_050428_01_B04, Mouse strain C57BL/6J (56 days, male) 16.7
70795466 Antisense, RP_050712_01_F05, Mouse strain C57BL/6J (56 days, male) 0.1

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