PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:269.0 nTPM
FANTOM5:491.4 Scaled Tags Per Million
Pig:143.0 nTPM
Mouse:92.7 nTPM
Allen mouse:4.5 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 269.0
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 181.0
2188 Female, age 91, both hemispheres 192.6
2301 Female, age 85, both hemispheres 186.8
1984 Male, age 76, both hemispheres 181.9
2090 Male, age 80, both hemispheres 162.6
Area postrema
nTPM: 153.7
2799 Male, age 61, both hemispheres 160.6
2306 Male, age 80, both hemispheres 153.7
2054 Male, age 76, both hemispheres 146.8
Dorsal cochlear nucleus
nTPM: 176.1
2802 Male, age 74, right hemisphere 195.4
2187 Female, age 91, both hemispheres 187.4
2370 Male, age 61, both hemispheres 176.8
2058 Male, age 76, both hemispheres 170.6
2378 Male, age 80, both hemispheres 150.4
Dorsal medullary reticular nucleus
nTPM: 190.0
2040 Female, age 85, both hemispheres 209.5
2088 Male, age 76, both hemispheres 183.8
2373 Male, age 61, both hemispheres 176.7
Dorsal motor vagal complex
nTPM: 178.1
2133 Female, age 91, both hemispheres 227.4
2000 Male, age 74, unknown 195.3
2643 Male, age 74, both hemispheres 188.2
2844 Male, age 55, unknown 186.2
2797 Male, age 61, both hemispheres 177.0
2185 Male, age 76, both hemispheres 165.0
2813 Female, age 72, unknown 156.6
2807 Female, age 85, both hemispheres 128.7
Dorsal tegmental nucleus
nTPM: 177.9
2083 Male, age 80, both hemispheres 214.5
2326 Male, age 74, both hemispheres 174.5
2358 Male, age 61, both hemispheres 168.3
1936 Male, age 76, left hemisphere 154.1
Dorsolateral tegmental area
nTPM: 169.5
2654 Male, age 80, both hemispheres 197.5
2751 Female, age 85, both hemispheres 180.3
2337 Male, age 61, both hemispheres 167.4
2141 Male, age 76, both hemispheres 152.3
2360 Male, age 74, both hemispheres 150.1
Gigantocellular reticular nuclei, medullary
nTPM: 196.9
2462 Male, age 74, both hemispheres 250.6
2310 Male, age 80, both hemispheres 201.6
2387 Female, age 91, both hemispheres 194.0
2314 Male, age 61, both hemispheres 185.2
1876 Female, age 85, both hemispheres 175.2
2022 Male, age 76, right hemisphere 174.6
Gigantocellular reticular nuclei, pars
nTPM: 217.4
2168 Male, age 76, both hemispheres 284.9
2084 Female, age 85, both hemispheres 209.8
2336 Male, age 61, both hemispheres 203.1
2330 Male, age 80, both hemispheres 197.5
2706 Male, age 80, both hemispheres 191.9
Inferior olive
nTPM: 164.8
2628 Female, age 91, both hemispheres 189.4
2085 Female, age 85, both hemispheres 168.5
2178 Male, age 61, both hemispheres 164.3
2563 Male, age 74, both hemispheres 159.8
2379 Male, age 80, both hemispheres 141.9
Kolliker-Fuse nucleus
nTPM: 197.6
2793 Female, age 91, left hemisphere 235.2
2163 Male, age 80, both hemispheres 222.2
2315 Male, age 76, right hemisphere 135.3
Lateral lemniscal nuclei
nTPM: 244.8
2169 Male, age 76, both hemispheres 301.5
2453 Male, age 74, right hemisphere 256.5
2746 Female, age 85, left hemisphere 232.3
2320 Female, age 91, left hemisphere 219.4
2036 Male, age 80, both hemispheres 214.0
Lateral medullary reticular nucleus
nTPM: 182.9
2044 Male, age 76, both hemispheres 217.3
2374 Male, age 61, both hemispheres 190.1
2804 Female, age 91, both hemispheres 178.7
2852 Male, age 80, both hemispheres 174.1
2190 Female, age 85, both hemispheres 169.1
2305 Male, age 74, both hemispheres 167.9
Lateral parabrachial nucleus
nTPM: 198.8
2139 Female, age 85, right hemisphere 257.2
2013 Male, age 80, both hemispheres 194.2
2790 Male, age 61, both hemispheres 184.5
2792 Male, age 76, both hemispheres 159.2
Lateral vestibular nucleus
nTPM: 203.5
2184 Male, age 76, both hemispheres 236.7
2311 Male, age 80, both hemispheres 170.3
Locus coeruleus
nTPM: 206.0
2123 Female, age 91, both hemispheres 239.1
2720 Male, age 74, both hemispheres 235.3
2014 Male, age 55, unknown 228.3
2317 Female, age 72, unknown 194.4
1980 Male, age 76, both hemispheres 183.2
2162 Male, age 80, both hemispheres 181.2
2788 Male, age 74, unknown 180.2
Medial olivary nucleus
nTPM: 152.6
2851 Male, age 80, both hemispheres 165.1
1943 Male, age 61, both hemispheres 153.7
2138 Female, age 91, both hemispheres 148.0
1962 Male, age 76, both hemispheres 143.6
Medial parabrachial nucleus
nTPM: 191.1
2854 Male, age 80, both hemispheres 202.8
2156 Male, age 61, both hemispheres 202.0
2170 Female, age 91, both hemispheres 194.2
2786 Male, age 76, both hemispheres 179.4
2463 Female, age 85, right hemisphere 177.2
Medial periolivary nuclei
nTPM: 237.5
2063 Male, age 76, both hemispheres 295.4
2171 Female, age 85, both hemispheres 293.3
2791 Male, age 74, right hemisphere 204.3
2081 Male, age 80, both hemispheres 198.8
2458 Female, age 91, both hemispheres 195.7
Medial vestibular nucleus
nTPM: 202.8
2134 Male, age 76, both hemispheres 214.7
2624 Male, age 61, both hemispheres 210.3
2093 Male, age 80, both hemispheres 208.2
2803 Female, age 91, both hemispheres 207.7
2801 Male, age 74, both hemispheres 195.0
2743 Female, age 85, both hemispheres 181.1
Motor facial nucleus
nTPM: 243.0
2062 Male, age 76, both hemispheres 305.9
2327 Male, age 80, both hemispheres 247.5
2365 Male, age 74, right hemisphere 244.9
2697 Female, age 85, both hemispheres 238.4
2126 Male, age 61, both hemispheres 216.6
2795 Female, age 91, both hemispheres 204.6
Motor hypoglossal nucleus
nTPM: 195.5
2125 Female, age 91, both hemispheres 222.2
2132 Female, age 85, both hemispheres 219.5
2461 Male, age 61, both hemispheres 210.4
2182 Male, age 80, both hemispheres 189.2
2277 Male, age 76, both hemispheres 136.1
Motor trigeminal nucleus
nTPM: 204.1
2079 Male, age 80, both hemispheres 247.3
2560 Male, age 74, both hemispheres 224.2
2321 Female, age 91, both hemispheres 188.8
2309 Male, age 76, both hemispheres 183.3
2335 Male, age 61, both hemispheres 177.1
Nuclei of the trapezoid body
nTPM: 257.3
2159 Male, age 61, both hemispheres 304.3
2735 Female, age 85, both hemispheres 277.7
1983 Male, age 76, both hemispheres 271.2
2166 Male, age 80, both hemispheres 225.3
2368 Female, age 91, both hemispheres 207.8
Nucleus ambiguus
nTPM: 207.0
2096 Female, age 85, both hemispheres 264.4
2071 Male, age 76, both hemispheres 149.6
Nucleus cuneatus
nTPM: 181.4
2100 Male, age 76, both hemispheres 227.2
2131 Male, age 76, both hemispheres 221.8
2564 Male, age 74, both hemispheres 205.8
2805 Female, age 91, both hemispheres 173.1
2376 Male, age 61, both hemispheres 172.0
2381 Male, age 80, both hemispheres 168.4
2562 Male, age 61, both hemispheres 166.6
2380 Male, age 80, both hemispheres 152.5
2808 Female, age 85, both hemispheres 144.9
Nucleus gracilis
nTPM: 163.2
2627 Male, age 74, both hemispheres 184.7
2382 Male, age 80, both hemispheres 164.5
2299 Female, age 85, both hemispheres 140.3
Nucleus raphe magnus
nTPM: 264.2
2160 Male, age 61, both hemispheres 328.0
2172 Female, age 85, both hemispheres 312.0
2455 Male, age 74, both hemispheres 263.4
2328 Male, age 80, both hemispheres 242.6
2051 Male, age 76, both hemispheres 224.8
2459 Female, age 91, both hemispheres 214.7
Nucleus raphe obscurus
nTPM: 168.4
2800 Male, age 61, midline 198.9
2845 Female, age 85, midline 182.4
2142 Male, age 76, midline 123.8
Nucleus raphe pallidus
nTPM: 178.5
2183 Male, age 80, midline 197.4
1924 Male, age 61, midline 196.9
2145 Male, age 76, midline 141.2
Nucleus tractus solitarii
nTPM: 142.6
2656 Male, age 76, both hemispheres 148.1
2144 Female, age 91, right hemisphere 141.4
2191 Female, age 85, both hemispheres 140.5
2307 Male, age 80, both hemispheres 140.5
Paramedian reticular nucleus
nTPM: 199.2
2050 Female, age 85, both hemispheres 242.1
2057 Male, age 80, both hemispheres 203.9
2313 Male, age 61, both hemispheres 198.7
2052 Male, age 76, both hemispheres 152.0
Parvicellular reticular nuclei
nTPM: 213.7
2558 Male, age 74, both hemispheres 248.3
2095 Male, age 76, both hemispheres 202.7
2119 Male, age 80, both hemispheres 190.2
Parvicellular reticular nuclei, medullary
nTPM: 203.8
2091 Female, age 85, both hemispheres 215.3
2189 Female, age 91, both hemispheres 213.1
2181 Male, age 80, left hemisphere 182.9
Pedunculopontine tegmental nucleus
nTPM: 177.0
2338 Male, age 61, both hemispheres 183.8
2334 Male, age 80, both hemispheres 183.2
1921 Female, age 85, both hemispheres 164.0
Peritrigeminal nucleus
nTPM: 202.5
2136 Male, age 76, both hemispheres 209.0
2179 Male, age 61, both hemispheres 200.4
2067 Female, age 85, both hemispheres 198.2
Pontine nuclei
nTPM: 269.0
2787 Female, age 85, both hemispheres 345.3
1863 Male, age 55, unknown 315.2
2727 Male, age 61, right hemisphere 288.5
1968 Male, age 76, left hemisphere 286.3
2109 Female, age 72, unknown 262.1
2454 Male, age 74, left hemisphere 241.5
2115 Male, age 80, left hemisphere 217.0
2319 Female, age 91, both hemispheres 195.8
Pontine raphe nucleus
nTPM: 207.1
2122 Female, age 85, midline 250.3
2853 Male, age 76, midline 163.8
Posteroventral cochlear nucleus
nTPM: 181.3
2752 Female, age 85, both hemispheres 197.1
2070 Male, age 76, both hemispheres 194.1
2135 Female, age 91, both hemispheres 173.6
2341 Male, age 80, both hemispheres 172.3
2371 Male, age 61, both hemispheres 169.5
Prepositus hypoglossal nucleus
nTPM: 172.1
2855 Female, age 85, right hemisphere 189.5
2086 Male, age 80, both hemispheres 154.7
Principal sensory trigeminal nucleus
nTPM: 234.3
2158 Male, age 61, both hemispheres 293.3
2008 Male, age 80, left hemisphere 226.5
2367 Female, age 91, left hemisphere 209.3
2324 Male, age 76, both hemispheres 208.1
Reticular pontine nucleus, caudal
nTPM: 229.5
2332 Male, age 80, right hemisphere 255.6
2092 Male, age 76, both hemispheres 251.3
2457 Female, age 91, both hemispheres 213.8
2559 Male, age 74, both hemispheres 197.3
Reticular pontine nucleus, oral
nTPM: 208.7
2361 Male, age 74, both hemispheres 254.0
2012 Female, age 85, both hemispheres 222.8
2366 Female, age 91, both hemispheres 213.4
1939 Male, age 80, both hemispheres 180.4
2167 Male, age 76, both hemispheres 173.0
Reticulotegmental nucleus
nTPM: 211.8
2452 Male, age 74, both hemispheres 228.7
2325 Male, age 76, both hemispheres 219.7
2333 Male, age 80, both hemispheres 201.1
2322 Female, age 91, both hemispheres 197.8
Spinal trigeminal nucleus, caudal
nTPM: 199.1
2390 Female, age 91, both hemispheres 254.3
2447 Male, age 76, both hemispheres 208.0
2642 Male, age 74, both hemispheres 189.6
2308 Male, age 80, both hemispheres 176.9
2312 Male, age 61, both hemispheres 166.9
Spinal trigeminal nucleus, interpolar
nTPM: 224.7
2625 Male, age 61, both hemispheres 303.5
2066 Male, age 76, right hemisphere 252.6
2389 Female, age 91, both hemispheres 208.1
2386 Female, age 85, both hemispheres 180.5
2033 Male, age 80, both hemispheres 178.8
Spinal trigeminal nucleus, oral
nTPM: 198.1
2164 Male, age 80, both hemispheres 220.7
2737 Female, age 85, both hemispheres 194.8
1978 Male, age 76, both hemispheres 178.9
Spinal vestibular nucleus
nTPM: 195.9
2186 Female, age 91, both hemispheres 213.4
2384 Male, age 74, both hemispheres 210.9
2780 Male, age 80, both hemispheres 197.7
2748 Male, age 76, both hemispheres 197.0
2806 Female, age 85, both hemispheres 180.1
2796 Male, age 61, both hemispheres 176.1
Subcoeruleus area
nTPM: 200.6
2089 Male, age 76, left hemisphere 244.2
1958 Male, age 80, both hemispheres 201.2
2323 Female, age 91, left hemisphere 192.0
2451 Male, age 74, both hemispheres 191.1
2369 Female, age 85, left hemisphere 174.5
Superior olive
nTPM: 230.5
1875 Female, age 85, both hemispheres 260.6
2020 Male, age 76, both hemispheres 241.6
2329 Male, age 80, right hemisphere 230.0
2561 Female, age 91, both hemispheres 214.6
2364 Male, age 74, right hemisphere 205.8
Superior vestibular nucleus
nTPM: 159.2
2015 Male, age 80, both hemispheres 173.6
2061 Male, age 76, both hemispheres 155.0
2383 Male, age 74, both hemispheres 149.1
Ventral medullary reticular nucleus
nTPM: 192.8
2060 Male, age 76, both hemispheres 200.5
2372 Male, age 61, both hemispheres 185.1
Ventral periolivary nuclei
nTPM: 243.0
2130 Female, age 85, both hemispheres 284.9
2165 Male, age 80, both hemispheres 257.1
2023 Male, age 76, both hemispheres 227.6
2794 Female, age 91, left hemisphere 202.6
Ventrolateral medulla, A1-C1 cell groups
nTPM: 191.3
1986 Male, age 76, both hemispheres 212.7
2741 Female, age 85, both hemispheres 199.5
2180 Male, age 61, both hemispheres 186.5
2302 Female, age 91, both hemispheres 180.2
2118 Male, age 80, both hemispheres 177.5
Ventrolateral tegmental area, A5 NE cell group
nTPM: 216.1
2449 Male, age 74, both hemispheres 249.1
1959 Male, age 76, both hemispheres 243.0
2161 Male, age 80, both hemispheres 216.2
2840 Female, age 85, both hemispheres 214.3
2456 Female, age 91, both hemispheres 199.0
2359 Male, age 61, both hemispheres 175.2

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 491.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 309.1
FF:10182-103D2 60 years, female 385.8
FF:10165-103B3 76 years, female 232.3
Medulla oblongata
Scaled Tags Per Million: 236.8
FF:10038-101F2 18-64 years, mixed 329.7
FF:10155-103A2 76 years, female 192.5
FF:10174-103C3 60 years, female 188.2
Pons
Scaled Tags Per Million: 491.4
FF:10033-101E6 18-54 years, mixed 491.4

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 143.0
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 122.2
Samples: 4

Max nTPM: 131.4
Min nTPM: 106.0
Sample A Female 126.5
Sample B Female 124.9
Sample C Male 131.4
Sample D Male 106.0
Pons
nTPM: 143.0
Samples: 4

Max nTPM: 163.9
Min nTPM: 119.5
Sample A Female 163.9
Sample B Female 119.5
Sample C Male 136.6
Sample D Male 152.0

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 92.7
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 92.7
Samples: 4

Max nTPM: 103.3
Min nTPM: 81.7
Sample A Male 103.3
Sample B Male 87.2
Sample C Female 98.4
Sample D Female 81.7

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 4.5
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 4.5
70946413 Antisense, RP_050428_01_B04, Mouse strain C57BL/6J (56 days, male) 9.0
70795466 Antisense, RP_050712_01_F05, Mouse strain C57BL/6J (56 days, male) 0.1
Pons
Expression energy: 4.4
70946413 Antisense, RP_050428_01_B04, Mouse strain C57BL/6J (56 days, male) 8.8
70795466 Antisense, RP_050712_01_F05, Mouse strain C57BL/6J (56 days, male) 0.0

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